Corvus cornix (hooded crow): 104693280 Help Entry 104693280         CDS       T03546                                  Symbol NPHP4 Name (RefSeq) nephrocystin-4 isoform X2   KO K16478   nephrocystin-4 Organism ccw  Corvus cornix (hooded crow) Brite KEGG Orthology (KO) [BR:ccw00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    03037 Cilium and associated proteins [BR:ccw03037]     104693280 (NPHP4) Cilium and associated proteins [BR:ccw03037]  Primary cilia and associated proteins   Nephronophthisis-related proteins    104693280 (NPHP4) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DUF3866 Motif Other DBs NCBI-GeneID:  104693280 NCBI-ProteinID:  XP_010404143 LinkDB All DBs Position 21:3058425..3081366 Genome browser AA seq 1070 aa AA seqDB search MPDGEEVVVRERRLHVGVHNGLRFVRAPQVTVLVPEAELSPGGSWGVPSSGARDAGQALA LRSRIQLSEMVPHPAFGVCFQLEYVFCSMGRAGGKALSGSARGEAADMRSVRWAVWSPVP GTGDTEVVLPLHGGARRGPCRALVYQTPLSSRSSRQGKHVESGTVQFHVSTVSEEHLVTA AEILCKDRDESKQPPTPSLRVPTPRQVPVSPRGPGLSVSQLVASPRGTGQTLQQDAGITH LEVDLGSPDAEPCASDQLRALPFTPLQLPMAAVGLQACSSRVSLSRASLARLHAAGFPDI LDCNQEPVEISEPVELGSFNLRLEEADPLQGNEIVLQFLAFGRDAQGSTEGPWPRTVFLT FQFYRFPPVTTPRLQLVSTDRGPATGLAVLAQLLVRVNEDGTLSTRPPGLQLKYMVDPAF LRPGEQRWFLRYLAEHSLQIDVWDGDSLLHVGSAAVKLEPLLRQGQRAVRTYHELEVATT EYEPDGTVMGREALRHGALRPLGVRVAVRGRLHLCLANVGHPCEETPGQLPSQTHIVTAP DSTVTTPRGSWRSPNTAGGGRTAWARRLVDVDNELEAALRSRRPEGWPKQRTWDLQVINA YRDHIKGESIYQMLSQAITATRTVHAVLGTAEFFEFALKNPYSVQHTVTIEVDHPELSVI LDPREWRHFKELTKSVTPVEEDMFHLRDDLKPQVYLRPSETVRIPFKYQTFSADPAVVAA QGPAGLGTGANADTHSLGKSGAKQTKLIQVSFQVSGGKPIALLRVKVEPQPHVVDQTFRF YHPELTFLKKTIRLPPWHTLPGTPVGVPGGQPEMFVRCSDPDIICETKSLGPGEPQDIFL KVAGGPSPQIKKFFVAIYTDTWLAAPVQIWQFYLHSLQRLDVACTAGQLTRLSLLLRGTA APRRVQAFTSHPQELEVDPNGAFLLPANGIQDLYIGVRPRRAGSKFIYLNLVDVESHQLV SSWLLCLSCRQPLISKAFEISLPAGGGRGCNKRITYTNPYPSPRLYFLCTNRPDLLQFKE DSFEVAGGEVYTIGLRFAPSPTVGEEEILIHINDHEDKNEETFCVKVLYQ NT seq 3213 nt NT seq  +upstreamnt  +downstreamnt atgccggacggtgaagaggtggtggttcgggagcggcggctgcacgttggcgtccacaat ggcctgcgctttgtccgggcaccacaggtcacggtgctggtgccagaggcggaattgtca ccgggtggcagctggggggtgcccagctctggagccagggatgcaggtcaagccctagcg ctgaggagccgcatccagctgagtgaaatggtccctcacccggcatttggggtctgcttc cagctggaatatgtcttctgcagcatggggagagccggtgggaaggccctgtctggcagt gcccgcggtgaggcggccgacatgcgctcggtgcgctgggctgtctggagccctgtcccg ggcaccggtgacaccgaggtggtcctgcccctgcatggtggtgcccgccgtggcccctgc cgagccttggtctaccagaccccgctgagcagcaggagctcccggcaggggaagcacgtg gagtctgggactgtccaattccatgtttccactgtttcggaagaacatcttgtaactgct gcggagatcctatgtaaagacagggacgagtcgaagcagcctcctacgccatcgctgaga gtgccaaccccacggcaagtgccagtctccccacggggaccagggctctcggtgtcacag ctcgtggcctcgccacggggcacaggccagaccctgcagcaggatgcgggcatcacccac ctggaggtcgacctcggctcaccggatgcagagccctgtgccagcgaccagctgcgggcg ctgcccttcaccccgctgcagctgcccatggctgctgtggggctgcaggcatgcagttcc cgtgtgtccctgtctcgcgcctcgctggcgcgcctgcacgccgccggctttccggacatc ctggactgtaaccaggagccagtggaaatctcggagccagtggagctgggcagtttcaac ctgcggctggaggaagctgaccctctacaaggcaatgaaatagtcctgcagttcctggcg tttggcagggatgcccagggtagcacggaggggccgtggccgaggactgtcttcctcacc ttccagttctaccgtttcccaccggtcaccacgccccggctgcagctggtcagcacagac agggggccggcaaccgggctggctgtgctggcgcagctccttgtccgggtcaacgaggac gggaccctcagcaccagaccaccgggcttgcagctgaagtacatggtggatccggctttc ctgcggcccggggagcagcgctggttcctgcggtacctggccgagcacagcctccagatt gatgtctgggatggagactccctgctccatgttgggtctgctgctgttaaactggagccc ctgctgcgccagggccagagggctgtcaggacctaccatgagctggaggtggccacgact gagtatgagccggacgggacggtgatgggccgcgaggctctgcggcacggtgccctgcgg cccctcggtgtccgtgtggctgtgaggggccgcctccacctctgcctggccaatgttggt cacccgtgtgaggagaccccagggcagctgccatcccaaactcatattgtcactgcacca gacagcactgtcaccaccccacgtggcagctggcgctccccgaacactgctggtggtggg aggacggcgtgggcacggaggctggtggatgtggacaatgagctggaggccgcactgcgc agtcgccggccagaaggctggccgaagcagcgtacctgggacctgcaggtcatcaatgcc taccgggatcacatcaagggagagagcatctaccagatgctcagccaggccatcacagcc acccgcactgtccacgccgtgctggggacagctgagttctttgagttcgccctgaagaac ccatacagcgtccagcacaccgtgaccattgaggtcgaccaccctgagctcagtgtcata ctggacccgagggagtggcgccacttcaaagagctgaccaagagtgttacaccggtggag gaggatatgttccatctccgtgatgacctcaagcctcaggtctacctgcgccccagtgag actgtccgcatccccttcaaataccagaccttctctgcagaccccgccgtggttgcggca caggggccagctgggctgggcaccggtgccaatgcagacactcactcccttgggaagagc ggggccaagcagacaaagctcatccaggtctccttccaggtgagcggggggaagcccatt gcgctcctgcgggtgaaggtggagccgcagccccatgtggtggaccagaccttccgcttc taccacccagagctcactttcctgaagaaaaccattcggctgcctccctggcacaccctc cctggcacgccggtgggggtgccaggcgggcagcccgagatgtttgttcgctgcagcgac cctgacatcatttgtgaaaccaaatccttggggcctggcgagccacaggacatcttcctc aaagtagctggaggaccaagcccgcagatcaaaaagttctttgttgctatttatacggac acctggctggcagcgcctgtccagatctggcagttctacctgcactcgctgcagcgcctg gacgtcgcctgcacggccgggcagctcacccgcctctccctgctgctgcgcggcaccgcg gccccacggagggtgcaggccttcacctcccacccccaggagctggaggtggatccaaac ggtgccttcctcctccctgccaatggcatccaggacctgtacatcggtgtgaggccacgg cgggctggcagcaagttcatctacctcaacctggtggatgtggagtcccaccagctggtg tcctcctggctgctctgcctgtcctgcaggcagcctctcatctccaaggcctttgagatc tcgctgcccgcgggaggtgggagaggctgcaacaagcgcatcacctacaccaacccctac ccctcaccccggctctacttcttatgcaccaaccgccccgacctgctgcagttcaaggag gactccttcgaggtggccggaggggaggtgtacaccattggcctgcgcttcgccccgagc ccgaccgtgggggaggaggagatcctgattcacatcaacgaccacgaggacaagaacgag gagaccttctgcgtgaaggtcctgtaccagtga

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