Corvus cornix (hooded crow): 104693501
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Entry
104693501 CDS
T03546
Name
(RefSeq) LOW QUALITY PROTEIN: protein gar2
KO
K12883
nuclear cap-binding protein subunit 2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03013
Nucleocytoplasmic transport
ccw03015
mRNA surveillance pathway
ccw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104693501
09122 Translation
03013 Nucleocytoplasmic transport
104693501
03015 mRNA surveillance pathway
104693501
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104693501
03041 Spliceosome [BR:
ccw03041
]
104693501
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
104693501
Spliceosome [BR:
ccw03041
]
Common components
Common spliceosomal components
Cap binding complex
104693501
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Motif
Other DBs
NCBI-GeneID:
104693501
NCBI-ProteinID:
XP_039412989
LinkDB
All DBs
Position
9:12828408..12832734
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AA seq
418 aa
AA seq
DB search
MEEQLPVFMLSGGVVSGHAMWNAPSSPQLAIHSPGTAGVRSGCRGPAVTSARGPSPAGSN
TLRVLERSAQESGGGSRLLPSAVRSCLPLEAAITALSRGGHRGPARAATATPRTGAVLEL
GEKGVAQAKQAAAAVTRAAARMGRDSESRSTSRGLDSSSNSARSSAMTTTLARPGARASP
RTGPPRLSREVPRAPPPHSREPRTASPLAARPAARARGACAGRGRAPRGGRAAWCRSVLG
WVGPGRACWVGLASAGSGGAAMSSGGTLSILRSDSYAELSQYRDQHFRGTRYDQERLLRK
SCTLYVGNLSFYTTEEQIHELFGKSGDIKKVIMGLDKVKKTXCGFCFVEYYARGDAENAM
RYINGTRLDDRIIRTDWDAGFKEGRQYGRGRSGGQVRDEYRQDYDAGRGGYGKTVQCQ
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcagcttcccgtgttcatgctttccggaggagtcgtttcaggccatgcgatg
tggaacgcaccgtccagtccgcagctcgccatccacagcccgggcaccgccggggtccgg
agcggctgccggggccccgctgtcaccagcgcccggggcccttcacccgccggctccaac
acactccgtgtgctcgagcgctcggcgcaggagagcggcggcggttcccgtctcctcccc
agcgctgtccgcagctgcctcccgctcgaagcggcgatcacggcgctgagccggggcggc
caccgcggcccggcccgcgcggccacggccaccccgcgcacgggcgccgtccttgagctc
ggcgagaaaggcgtcgcgcaggcgaagcaagcggcggcggcggtgacccgggcggcggcg
cggatgggccgcgactccgagagccgctccacgagccgcgggctggacagcagcagcaac
agcgcccgcagcagcgccatgaccaccactctcgcgagacccggcgcccgagcgtcccca
cgcacagggcccccgcgcctctcgcgagaggtgccgcgcgccccgccgccgcactcgcga
gagccgcgcaccgcctcgccattggctgcgcggccggcggcgcgtgcgcggggcgcgtgc
gcggggcgcgggagggcgccaaggggcggccgggctgcgtggtgtcggtcggtcctgggc
tgggtaggacccggccgggcctgctgggttgggctggcctcggccggatcgggcggcgcc
gccatgagctccggcggaacgctgagcatcctgcgcagcgactcctacgccgagctcagc
cagtaccgagaccagcacttccgggggacgcggtacgaccaggagcgcctcctgaggaag
agctgcacgctttacgtggggaacctgtccttctacaccaccgaggagcagatccacgag
ctcttcgggaaaagcggcgacatcaagaaggtcatcatggggctggacaaagtgaagaaa
acgncctgcggcttctgcttcgtggagtattatgctagaggagatgctgaaaatgcaatg
agatacataaacgggaccagacttgacgacaggatcataaggacagactgggatgcagga
tttaaggagggtaggcagtatggccgtggaagatcagggggacaggtccgagatgagtat
cggcaagactatgatgctggaagaggtggctatggcaaaactgttcagtgccagtga
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