Corvus cornix (hooded crow): 104693564
Help
Entry
104693564 CDS
T03546
Symbol
RARS1
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
104693564 (RARS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
ccw01007
]
104693564 (RARS1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccw03016
]
104693564 (RARS1)
03029 Mitochondrial biogenesis [BR:
ccw03029
]
104693564 (RARS1)
Enzymes [BR:
ccw01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
104693564 (RARS1)
Amino acid related enzymes [BR:
ccw01007
]
Aminoacyl-tRNA synthetase
Class I (G)
104693564 (RARS1)
Transfer RNA biogenesis [BR:
ccw03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
104693564 (RARS1)
Prokaryotic type
Other AARSs
104693564 (RARS1)
Mitochondrial biogenesis [BR:
ccw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
104693564 (RARS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
tRNA-synt_1e
Myo5a
Cnn_1N
tRNA-synt_1
LisH_TPL
Motif
Other DBs
NCBI-GeneID:
104693564
NCBI-ProteinID:
XP_039415434
LinkDB
All DBs
Position
13:complement(15964124..15980948)
Genome browser
AA seq
661 aa
AA seq
DB search
MEARVAQSAARLARQENEIKLLTAEIERLKNFGCLGVSPSLEGLRDENAKLKYRLNFLKK
SLQEERSKSTKSMININSCLQEIFGAAIQAAYPDLENPPLVVTPSQQPKFGDYQCNSAMG
ISQILLKTREQKVSPREIAEKIAKNIPANECIEKVEIAGPGFINVHLRKDFVSKQLSSLL
ISGVQPPAIGKRKKVVVDFSSPNIAKEMHVGHLRSTIIGESMCRLFEFAGYDVLRLNHLG
DWGTQFGMLIAHLQDKFPDYLTVSPPIGDLQAFYKESKRRFDTEEEFKKRAYQCVVLLQS
KNPDFIKAWNLICDVSRREFQKIYNCLDITIIERGESFYHEMMKDIVKEFEDKGFVQVDD
GRKVVFVPGFPVPLTIMKSDGGYTYDTSDLAALKHRLCEEKADILIYVVDSGQSVHFQTV
FAAGQMIGWYDPKVTRVAHAAFGVVLGEDKKKFKTRSGDTVRLIDLLEEGLKRAMDKLKD
KERDKVLTPEELKAAQTSVAFGCIKYADLSHNRLNDYVFSFDKMLDDRGNTAAYLLYAFT
RIRAIARLANIDEQMLRKAAREEVLILDHEKEWKLGKCILRFPEILQKILEDLLLHTLCD
YLYELATTFTEFYDSCYCVEKDRQTGQIVKVNMWRLLLCEATATVMAKGFDILGIKPVQR
M
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcgcgtggcgcagtccgcggcgaggctggcgcggcaggaaaacgagatcaag
ttgttaactgcagaaattgagcgtctgaagaactttgggtgcttgggagtctccccgagt
ttggaagggttgcgagacgaaaacgcaaaactcaagtaccggttaaacttccttaagaag
agccttcaagaggaaagaagtaaatcaaccaaaagcatgattaatatcaacagctgtctc
caggagatctttggagctgccattcaggctgcctacccagacttagaaaaccctcctctg
gtggtgacaccaagtcagcagcccaaatttggggactaccagtgtaacagtgccatgggc
atatcacagatactgctcaaaaccagggaacagaaggttagcccacgagaaatcgcggag
aaaatagcaaaaaatattcctgccaatgaatgcattgagaaggttgaaattgctggtcct
ggttttatcaatgtccacttgagaaaggattttgtgtcgaagcagctgagcagtttattg
atcagtggagttcaaccaccagctattggcaaaaggaaaaaggtggtggtggatttttcc
tcccccaacattgcaaaggagatgcacgttggccacctgcgctctaccatcatcggggag
agcatgtgccggctcttcgagttcgcaggttatgatgttctgaggttgaaccatttagga
gattggggcacccagtttggaatgctcattgctcacctccaggacaaatttccagattac
ttaactgtttctcctcccattggggacctccaagctttttacaaggaatccaagcggagg
tttgacacagaggaggaatttaagaagcgagcctaccaatgtgtggtgctgctgcagagc
aaaaaccctgacttcattaaagcctggaatcttatctgtgacgtgtcacgcagagaattc
cagaaaatctacaactgtttggacatcacaatcatagagagaggagaatccttctaccat
gagatgatgaaagacattgtgaaagaatttgaagataaaggatttgtccaggttgatgat
ggccggaaggtcgtgttcgtcccgggtttccctgtcccgctgactatcatgaaatctgac
ggaggttacacgtatgacacatcagacctggctgctctgaagcacaggctgtgtgaagag
aaggctgatatccttatctacgttgttgatagtggccagtctgtgcatttccaaacagtg
tttgcagctggacagatgattggctggtatgatcccaaagtcaccagagtggcccatgct
gcctttggagtggtgctgggagaagacaagaagaagttcaaaactcgttcaggggacacg
gtgcgtctcatagacctgctggaggaagggctgaaacgagccatggacaagctgaaagac
aaggaacgggacaaggtgctgacgccagaagagctgaaagctgcccagacgtcggtggct
tttggatgcattaaatatgcagatctgtcccacaacagactgaacgattacgtgttctcc
tttgacaagatgctggatgaccgagggaacaccgctgcctatttgctctatgccttcaca
cggatcagggctattgctcgcctggccaatatcgatgagcagatgctgcggaaggcagcc
agggaggaggtgcttatccttgatcatgagaaggagtggaaactgggcaagtgcatcctg
aggtttcctgagatcctgcagaagatcctggaggacttgctattgcacacactctgtgac
tacctgtatgagctggccaccaccttcactgagttctacgacagctgctactgtgttgag
aaggacaggcagaccggccagattgtgaaggtgaacatgtggaggctgctgctgtgcgaa
gccactgccaccgtcatggccaaaggattcgacatcctggggattaagcctgtgcagagg
atgtag
DBGET
integrated database retrieval system
