Corvus cornix (hooded crow): 104693647
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Entry
104693647 CDS
T03546
Symbol
PRG4
Name
(RefSeq) proteoglycan 4
KO
K24286
proteoglycan 4
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
ccw00535
]
104693647 (PRG4)
Proteoglycans [BR:
ccw00535
]
Extracellular matrix (ECM) proteoglycans
Others
104693647 (PRG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hemopexin
Somatomedin_B
Motif
Other DBs
NCBI-GeneID:
104693647
NCBI-ProteinID:
XP_039411552
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Position
8:27822357..27842337
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AA seq
1753 aa
AA seq
DB search
MMSYLKVMIIWNILGLSLVVLSLSLIPEVSSQAVSCEGRCFESFERGRECDCDADCERYG
KCCPDYTKHCKEAHTAKPTPEIPPENKSTSKRSSTDEEELPDEAVEDSEIQVTTPAPTTE
PAQTTLGATEEPPTKEDTPTTPKVEDTTPEATEEPVTEDYAPTTDAAEDVTPDATEEPVT
EVDPTDIPPTQDPTPDATEAPATETEPPTSRTSEETTPEEPTTNTPEETTPEEPTTPTPE
ETTPEEPTTPTPEETTPEELTTPKPEETTPEEPTTPTPEETTPEEPTTATPEETTPEELT
TPKPEETTPEEPTTPTPEETTPEDPTTPAPEETTPEEPTTPTPEETTPEEPTTPKPEETT
PEEPTTPTPEETTPEEPTTPKPEETTPEEPTTPTPEETTPEEPTTPKPEETTPEEPTTAT
PEETTPEEPTTATPEETTPEESTTPKPEETTPEEPTTPTPEETTPEEPTTPTPEETTPEE
PTTPTPEETTPEEPTTPKPEETTPEEPTTPKPEETTPEEPTTPKPEETTPEEPTTPTPEE
TTPEEPTTPKPEETTPEEPMTPIPEETTPEEPTTPKPEETTPEEPTTPTPEETTPEEPTT
PKPEGTTPEEPTTPTPEETTPEEPTTPKPEETTPEEPTTPTPEETTPEEPTTPKPEETTP
EEPTTPKPEETTPEEPTTPTPEETTPEAPTTPKPEETTPEEPTTPTPEETTPEEPTTPKP
EGTTPEEPTTPTPEETTPEEPTTPKPEETTPEEPTTPTPEETTPEEPTTPTPEETTPEEP
TTPKPEETTPEEPTTPIPEETTPEEPTTPIPEETTPEELTTLTPEGTTPEEPTTPTPEET
TPEEPTTPTPEETTPEELTTPIPEGTTPEEPTTPTPEGTTPEETMTPTPEETTPKPEETT
PEEPTTPKPEETTPEEPTTPKPKETTPEEPTTPKPEETTPEELTTPTPEETTPEEPTTPK
PEETTPEEPTTPKPEGKTPEEPTAPTPEETTAEEPTTPTPEETTPEEPTTPKPEETTPEE
PTTPTPEETTPEEPTTPMPEEITLEEPTTPTPEETTPEKPTTPKPEETTPEEPTTPKPEE
TTPEEPTTATPEETTPEEPTTPKPEEKTPEEPTTPTPEETTPEEPTTPTPEETTPEELTT
PKAEETTPEEPTTPKPEVTTRDEPATLADSPTTPKPEETTPEEPTTMADSPTTPKAEDAD
SPTSPAAPEADSTASKATAAPGNAAATTAGNDSPTAGVGTMLSDTTTENKETTTPKKDRT
TLLKDIFTAMMTTAKPGDSPKGMDDIPNTTPMAKQPATAAAESETTSTDTKTSTTAATAP
LPNPTVLVTTIKEDSTPQPSEAVTLNEKEATTETEQAGPAADKDSPGAACVIVEMTTAGK
KEVTTIKEMGTTPEKEMEDVTEKAPSIDKEEVTTVTKETTTRDKKDTIEEMYLLSNGTSK
PTIHFQEVTEAREEPHPTEPETLPAKEEPEINKPLIQVGDLPVFPGETQERKDEKDLCSG
KPADGMVALPNGTLAVFRGHYYWLLNGRAPPTTNPRRISDGWGIPSPIDSVFSRCNCDGK
TFFIKGPLYWRFTNGVMDKGYPKPLATGFAGLSGRIVATLPVARYNNRPESVYFIKRDGN
IQQYVYRQEPAKKCQRRAQVTIRYPAFVPRVVIRRRFQRAVRMPTVIRTVRIHPHPSGIL
RKEIQMTTYWRGLPKVVHSTLSVPNQSKPDGYDYYAFSYNRYYSLDIGKRMARPVTALTG
KTVSKDWYNCPSK
NT seq
5262 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgtacctgaaagttatgatcatatggaacatacttggcttatccctggtggtc
ctttcactgtccttgattccagaagtgtcttctcaagccgtctcctgcgagggacgctgc
tttgaatccttcgagaggggaagggagtgtgactgcgatgccgactgtgagcgatacggt
aaatgctgcccagactacaccaagcattgcaaagaggcacacacagcaaagccaacccca
gagattcctccagaaaacaaatcaacatctaaaaggtcctccacagatgaggaagagctg
ccagatgaagctgtggaagactctgaaatccaagtgaccactcctgctccaactacagaa
cctgcacagacaacccttggagccacagaggaaccacctaccaaggaagacactcccaca
accccaaaggtagaggatacaacccctgaggccacagaggagccagtgaccgaagactat
gctcccaccacagatgcagcagaagatgtgacccctgatgccacagaggaaccagtgact
gaagtggatcccaccgacatccccccaacgcaagacccaacccctgatgccactgaggca
ccagcaaccgagacggaaccacccaccagccgcacatcggaggaaacaaccccagaggag
cccaccaccaacacaccagaagaaacaaccccagaagagccaacaacacccacaccagaa
gaaacaaccccagaggagccaacaacacccacacctgaggagacaaccccagaggagcta
acaacacccaaaccagaggagacaaccccagaggagcccacaacacccacaccagaagaa
acaaccccagaagagcccacaacagccacacctgaggagacaaccccagaggagctgaca
actcccaaaccagaagagacgaccccagaggagccgacaacacccacaccggaagaaaca
accccagaggacccgacaacacccgcacctgaggagacaaccccagaggagccaacaacc
cccacaccagaagagacaaccccagaagagccgacaactcccaaacctgaggagacaacc
ccagaggagccgacaacacccacaccggaagaaacaaccccagaggagccgacaactccc
aaacctgaggagacaaccccagaggagccgacaacccccacaccagaagagacaacccca
gaagagccgacaactcccaaacctgaggagacaaccccagaggagccgacaacagccaca
cctgaagagacaaccccagaggagccgacaacagccacacctgaggagacaaccccagag
gagtcgacaacacccaaaccagaagagacgaccccagaagagccgacaacacccacaccg
gaagaaacaaccccagaggagccgacaacacccacacctgaggagacaaccccagaggag
ccgacaacccccacaccggaagagacaaccccagaagagccgacaactcccaaacctgag
gagacaaccccagaggagccgacaactcccaaaccagaagagacaaccccagaggagccg
acaacccccaaacctgaggagacaaccccagaggagccgacaacccccacaccagaagag
acaaccccagaagagccgacaactcccaaacctgaggagacaaccccagaggagccgatg
actcccataccagaggagacaaccccagaagagccgacaacacctaaaccagaagagaca
accccagaagagccgacgactcccacaccagaagaaacaaccccagaggagccgacaaca
ccaaaaccagaggggacaaccccagaggagccgacaacacccacacctgaggagacaacc
ccagaggagccgacaactcccaaaccagaagagacaaccccagaggagccgacaaccccc
acacctgaagagacaaccccagaggagccgacaactcccaaaccagaagagacaacccca
gaagagccgacaactcccaaacctgaggagacaaccccagaggagccaacaacacccaca
cctgaggagacaaccccagaggcgccgacaacacctaaaccagaagagacaaccccagaa
gagccgacgactcccacaccagaagaaacaaccccagaggagccgacaacaccaaaacca
gaggggacaaccccagaggagccaacaacacccacacctgaggagacaaccccagaggag
ccgacaactcccaaaccagaagagacaaccccagaggagccgacaacccccacacctgaa
gagacaaccccagaggagccgacaacccccacaccagaagagacaaccccagaagagccg
acaactcccaaacctgaggagacaaccccagaggagccaacaacacccatacctgaggag
acaaccccagaggagccaacaacacccatacctgaggagacaaccccagaggagctgaca
acactcacacctgaggggacgaccccagaggagccaacaacacccacacctgaggagacg
accccagaggagccaacaacacccacacctgaggagacaaccccagaggagctgacgact
cccataccagaggggacaaccccagaagagccgacaacccccacacctgaggggacaacc
ccagaggaaacaatgacccccacacctgaggagacaacacccaaacctgaggagacaacc
ccagaggagccgacaacccccaaaccagaggagacaaccccagaggagccgacaactccc
aaaccaaaagagacaaccccagaggagccgacaacacccaaaccagaggagacaaccccg
gaggagctgacaacacccacaccggaagagacaaccccagaggagccgacaactcccaaa
ccagaagagacaaccccagaggagccgacaacacccaaaccagaggggaaaaccccagag
gagccaacagcacccacacctgaggagacaaccgcagaggagccaaccacccccacacca
gaggagacaaccccagaggagcccacaacacccaaaccagaagagacaaccccagaggag
ccaacaactcccacacctgaggagacaaccccagaagagccaacaacacccatgccagaa
gagataaccctagaggagcccacaacacccacaccggaagagacaaccccagaaaagcca
acaactcccaaaccagaagagacaaccccagaggagccaacaactcccaaaccagaggag
acaaccccagaggagccgacaacagccacacctgaggagacaaccccagaggagccgaca
acacccaaaccagaggagaaaaccccagaggagcccaccacccccacacctgaggagaca
accccagaggagccgacaacccccacacctgaggagacaaccccagaggagctgacaact
cccaaagcagaggagaccaccccagaggagccaacaacacccaaaccagaggtgacaacc
cgagacgaaccagcgaccttggctgactctcctaccaccccaaaacctgaagagacaacc
ccagaagaacctacaacgatggcagactctcctacgacccctaaagccgaagatgcagac
tctccgaccagccctgcagctcctgaggccgatagcactgccagtaaagccacagctgct
cctggcaatgctgccgccacaacagctggtaacgactcccccacagctggggtaggcaca
atgctttcagataccacaactgagaacaaggagacaacaacacccaaaaaagacagaact
actctgcttaaagacattttcacagctatgatgacaacagctaaaccaggtgactctcct
aaaggtatggatgacattccaaacacaactcctatggccaagcaacctgccactgcagca
gctgaatcagaaacaacttctacagacaccaagacttcaacaacagcagccacagctccc
ttgcccaatcccactgtgctggtaacaaccatcaaagaagattcaactcctcaacccagt
gaggctgtaacactaaatgaaaaagaggcaactacagaaactgagcaggctgggccagca
gcagacaaagatagcccaggtgctgcttgtgttattgtggagatgacaacagctggtaaa
aaagaggtaacaaccatcaaagaaatgggcactacacctgaaaaagaaatggaagatgtc
actgaaaaggcccctagtattgacaaagaagaggtaactacagttaccaaagaaaccaca
acaagggataaaaaggacacgatagaagaaatgtatcttttgtctaatgggacatccaag
ccaacaatacatttccaggaggtcactgaggccagagaagagcctcacccaaccgaaccc
gaaactctgccagcaaaagaagagcccgagataaacaagcctttaatacaggttggggac
ctgccagtgttccctggagaaacacaagagaggaaagacgagaaggacctgtgcagcggg
aagccagcggacggcatggtcgctctgcccaatggcaccctggccgtcttccgaggtcac
tattactggctgctgaacggccgggccccgccgaccaccaacccccgccggatcagcgac
ggctggggcatcccctcacccatcgactccgtcttctccaggtgcaactgcgatgggaaa
accttcttcatcaagggtcccctgtactggcgcttcactaatggtgttatggataaaggc
tatcccaaacctctcgcaactggatttgcagggttaagtgggagaatagtagcaaccctc
cctgtggcaagatacaacaacagaccagaatctgtttattttatcaaaagagatgggaac
atccagcagtatgtgtacagacaagaaccagccaagaagtgtcaaagaagggcgcaggtc
accatcagatacccagcctttgtccccagagttgtcatcaggcggcgcttccagcgcgcc
gtgcgcatgccaactgtcatccgcactgtcaggatccacccccacccctctggcattctg
cgcaaggaaatccaaatgacaacgtactggagagggctccccaaagttgtccactcaact
ctctccgtgcccaaccagagcaagcccgatggttacgattactacgccttctcttacaat
cggtactacagtttggatattggcaaaagaatggcacgacctgttactgctctcacagga
aagactgtatccaaagactggtacaactgtcccagcaagtga
DBGET
integrated database retrieval system