Corvus cornix (hooded crow): 104693672
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Entry
104693672 CDS
T03546
Symbol
USP53
Name
(RefSeq) inactive ubiquitin carboxyl-terminal hydrolase 53
KO
K27919
inactive ubiquitin carboxyl-terminal hydrolase 53
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccw03037
]
104693672 (USP53)
Cilium and associated proteins [BR:
ccw03037
]
Other cilia and associated proteins
Stereociliary proteins
104693672 (USP53)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
104693672
NCBI-ProteinID:
XP_010404736
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Position
4:3606737..3636723
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AA seq
1112 aa
AA seq
DB search
MAWVKFLRKPGGNLGKVYQPGSILSLAPTKGLLNEPGQNSCFLNSAVQVLWQLDIFRRSL
RGLTGHVCQGDACIFCALKAIFSQFQHSREKALPSDNMRHALAESFKDEQRFQLGFMDDA
AECFENILERIHFHLVPNSETDMCTSKSCISHQKFAMTLYEQCVCRSCGASSDPLPFTEF
VRYISTTALCNEVEKMMERHERLKPEMFAELLQAANTADDYRKCPSNCGQKIKIRRVLMN
CPEIVTIGLVWDSEHSDLTEEVMRNLATQLYLPGLFYRVTDENAKNSELFLVGMICYTSR
HYCAFAFHTKSCKWVLFDDANVKEIGTKWKDVVSRCIRCHFQPLLLFYANPDGTAVSPED
APKQIIHWSQCKAAGGNGEDLGFEKHSAARSDHVKENGIGDSTNQRSNKKLQPDNPAFSR
SHIQASGGRGPAKLGYSDQKDRLKDLSRECAQKAADMKNFTSLRKDADRGPRKESGRQRD
LLGEDRSSAKSGSPPVGSGLRHCPDQRIYSSQGRGPYKHDNQAPHQAKLSAHVLGSNKTE
PFPAGEKPVTRTRTNGITGYDTDTSQDCRDKGSIRSRSKGWKPMRETLNVDSIFSETEKK
QHSPKHKANLSSKSKHEKERSFNHWPKENQMQKGLMTIYEDETKQDTGSRSSLDSEGKGN
AEKSKGFTERKLHGDNWQIQRTESGYESSDHISNGSANPDSPIIEGINTADAKIVKESAS
CSEQNLPTKKADSVLHSAPEQNRNFHAPDLRKDQISSEVNYKPHPHAGFPTELYLQVPSP
PVKRAEMPEINRKYFPSSVLQPVLKEIVKSDNRNKANEANSSEWLHTERFEKVNVPVYCA
DSVPHPFPDNACGRKPIHSDFPPPAQPQSHHTKTLGPKVGLVPCAPQTLPERPAVLPAPP
SEHAGHPLRRAEPLWVPEAVYQNIPPPLPPKKYALSTLSGAENNSAVDVKSPEALQNSPL
RQTGAPSKSASEASVVPAEQRLKEPFPGNEVFVHKPDSPPRLSVNEFWTVSENMLKKGSR
HTGPSPGYADGNDSVSLTTYFSVDSCMTDTYRLKYHQRPKLYFTESGSFHKEKHPPAAGV
DLNATYPATLEPRHPIPEQRYKANAEGIHCSR
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atggcatgggtgaaattcctaagaaaacctgggggtaaccttggaaaagtttatcagcct
ggaagtatcctgtccctggcccctacaaaaggcttattaaacgaacctggacaaaacagc
tgctttcttaatagtgctgttcaggtattatggcaacttgacatatttcgacgaagttta
agaggtttaactggacacgtgtgtcaaggagatgcctgcatattttgtgctttaaaggca
atcttttcacagttccaacacagtcgagaaaaagccctcccgtcagataacatgagacat
gccctcgcagaaagcttcaaggatgagcagcgtttccagctgggattcatggatgatgca
gcagagtgctttgaaaatatccttgagaggattcattttcacttagtgccaaacagtgaa
acagatatgtgcacttcaaaatcctgtatttctcaccagaagtttgctatgacgctgtat
gagcagtgtgtgtgtcgcagttgtggagcatcatcagatccgttgccttttacggaattt
gtgcgttacatttccaccacagccctgtgtaatgaagtagaaaaaatgatggagagacat
gaacgtctcaagccggaaatgtttgcagaattgctgcaggcagcaaatactgctgatgac
tacagaaagtgtcctagtaattgtggtcaaaaaataaaaattcgtcgtgttcttatgaat
tgtcctgagattgtaaccatcggtttagtctgggattcagaacactctgatctgacagaa
gaggttatgcggaatctggcaacacagctttatcttccggggctgttttatagggttaca
gatgaaaatgccaaaaacagtgagctttttctagtgggaatgatttgctacacgagccga
cattactgtgcctttgcctttcacaccaagagctgcaaatgggtgctgtttgatgatgct
aatgtaaaagagattggaacaaaatggaaagatgtggtgtccaggtgcattcggtgtcac
ttccagccattgctgctattttatgctaacccagatggcacagctgtgtctccagaagat
gcaccaaagcagattattcactggtctcaatgcaaggcagcaggaggaaatggggaagac
ctgggatttgaaaagcattctgctgctagatcagatcatgtgaaagagaatggaattgga
gactccactaatcaaaggagtaataaaaaacttcagccagataatccagcattcagcaga
agccatattcaagcaagtggtggtagaggtccagccaagttaggatacagtgatcaaaag
gacaggctaaaggacttatccagagagtgtgcccagaaagctgctgacatgaaaaacttc
acatctttacgaaaagatgcagacagaggaccaaggaaagagtctggcagacaaagagac
ttgctgggggaagaccgttccagtgctaagtcagggtctcctccggttggaagtggactg
aggcactgcccagatcagcggatctacagcagccagggaaggggcccctacaagcacgac
aaccaagcacctcaccaagcaaagctttctgcacatgtgcttggatcaaacaaaacagaa
ccttttcctgctggagagaaaccagtgacaaggacacggaccaatggcatcactggctac
gatacggacaccagtcaagactgcagggacaaaggaagtatcaggagcaggagtaaaggt
tggaaaccaatgcgagagacactgaatgtagacagcattttcagtgagactgagaaaaaa
cagcacagcccaaagcacaaagcaaacctgagcagtaaatctaagcatgaaaaggagcgg
agctttaatcactggccaaaggaaaaccaaatgcagaagggtttaatgactatatatgaa
gatgagacaaaacaggatacaggaagtcgaagttcactggattctgagggaaaagggaat
gctgaaaaaagcaaaggatttacagagagaaaactccatggtgataactggcaaattcag
aggacagaatctgggtatgaaagcagtgaccatatcagcaacggatctgcaaatccagac
tctcctattattgaaggaatcaatacagcagatgccaagattgtgaaggaaagtgcttcc
tgcagtgaacagaacttgccaaccaaaaaagctgacagtgtgttacattcagcacctgag
cagaacagaaacttccatgccccagatttgaggaaagaccagatcagttccgaagttaac
tacaaacctcatcctcatgctggtttcccaacagaattatatttgcaggtgcccagtcct
ccagtaaagagagctgaaatgcctgagatcaataggaagtatttcccatcatcagttctc
cagccagttctcaaagagattgtgaagtcagacaacaggaacaaggcgaacgaggcaaac
tcttccgagtggcttcacacagagaggtttgagaaggtgaacgtgccggtgtattgtgca
gacagcgtgccccaccccttcccagacaatgcctgtggcaggaagccgatccacagcgac
tttcccccccctgcccagccgcagtctcaccacacaaaaacactgggtcccaaggtgggg
ctggtgccctgtgcgcctcagaccctgccggaaaggccggcggtgctgcccgcccctccc
agcgagcacgccggccaccccctccgaagggcggagcccctctgggtgcctgaagccgtg
taccagaacattcctccccccttacctccgaagaaatacgctctgagcactttgtcagga
gcagagaataactcggcagtggatgtaaaatcaccggaagcgttgcaaaatagtccatta
aggcaaacaggtgcaccttcaaaatctgcatcagaagcaagcgtagtcccagctgaacaa
aggcttaaagagccctttccagggaacgaagtgttcgttcataaaccggattctccacct
cgcttatcagttaatgagttctggactgtgtctgagaacatgctaaagaaaggatcccgt
cacacgggacccagccctggctatgcggatgggaatgacagcgtgtccctaaccacttac
ttctcggtagacagctgcatgactgacacctacaggctcaagtaccaccagaggcccaag
ctgtattttacagagagtggaagcttccacaaggagaagcatcctccagcagctggagta
gatctgaatgccacataccctgccactcttgagcccaggcatcccatccccgaacagagg
tacaaggcaaatgcagaaggaatacactgcagtagatag
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