Corvus cornix (hooded crow): 104693791
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Entry
104693791 CDS
T03546
Symbol
PIGM
Name
(RefSeq) GPI mannosyltransferase 1
KO
K05284
GPI mannosyltransferase 1 subunit M [EC:2.4.1.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00563
Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
ccw01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis
104693791 (PIGM)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccw01003
]
104693791 (PIGM)
Glycosyltransferases [BR:
ccw01003
]
GPI-anchor biosynthesis
Core oligosaccharide
104693791 (PIGM)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mannosyl_trans
PIG-U
GT87
Motif
Other DBs
NCBI-GeneID:
104693791
NCBI-ProteinID:
XP_010404933
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Position
3:46858846..46864913
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AA seq
417 aa
AA seq
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MAGAGAALLAGLLARLALVLYGLYQDRAMRVRYTDVDYRVFTDAARLVTEGRSPYRRATY
RYTPLLAWLLTPNVFFVEAFGKMLFVAGDLAAAVVAYRALRRRGAAAGRACGCCAAAWLL
NPLPMAVSSRGNAEALVALLVLATLYWVETGSVGKAAVCYGLAVHMKIYPLTYALPIALR
LRTRPRRGEGALDAGGNKTAKFTFMARLWHLFIKMLNCDVLLFGTLAGSVLAALTLAFYH
LYGWEFLEHAYLYHLTRRDIRHNFSPYFYMLYLTAESKWSFALGLAAFLPQLLLLLVVSI
AFYRDLAFSCFLHTTIFVTFNKVCTSQYFVWYLCLLPLVMPSIKMSWRRGVLLLLLWFIG
QGLWLTPAYFLEFKGYNTFLFIWLAGLLFLLINSLIIVQIISHYQKEAQVAKKLKQW
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgcgggcgcggccctgctcgcggggctgctggcgaggctggcgctggtgctg
tacgggctgtaccaggaccgcgccatgcgggtgcgctacaccgacgtcgactaccgggtg
ttcacggacgcggcgcggctggtgaccgaggggcgttcgccctaccggcgggccacgtac
cgctacacgccgctcctggcctggctgctgacgcccaacgtgttcttcgtcgaggctttc
ggcaagatgctcttcgtggccggggacctggcggctgctgtcgtcgcctaccgggccctg
cggcgccgaggagccgccgccggccgcgcctgcgggtgctgcgccgccgcctggctcctc
aaccccctgcccatggccgtgtccagccggggcaacgcggaggcgctggtggcgctgctg
gtgctcgccaccctgtactgggtggagacgggcagcgtgggcaaggccgccgtgtgctac
gggctggccgtgcacatgaaaatttatcccctgacctacgcgctgcccatagcgctccgc
ctgcgcaccaggccgcgccgcggggaaggggcgctggatgcggggggtaacaaaacagcg
aagttcacgttcatggcgcgcctctggcacctttttataaagatgctgaactgcgacgtg
ctgctctttggaacgcttgccggatcagtgctggctgccttgactctggcattttatcac
ctctatggctgggagtttttggagcatgcctacctctatcacttgaccaggagggatatc
cgtcataacttctctccctatttctacatgttgtacttgacagcagagagcaaatggagt
tttgcccttgggctcgcagctttcctgccccagctgcttttgctcctggttgtgtccata
gcattctacagagaccttgccttcagttgtttcctacacaccactatttttgtgactttt
aacaaagtatgcacatcccagtactttgtttggtatctctgtcttttgccccttgtaatg
cctagtattaagatgtcctggcgtcggggcgtgctgcttcttcttctgtggttcatcgga
caagggctgtggcttactcctgcatactttctggagttcaaaggatataacactttctta
tttatatggttggcaggcttgcttttccttttaattaatagcctcataattgttcagatt
atttcacattatcaaaaagaagcacaagttgcaaaaaaactgaaacaatggtaa
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