Corvus cornix (hooded crow): 104693926
Help
Entry
104693926 CDS
T03546
Symbol
HBS1L
Name
(RefSeq) HBS1-like protein isoform X1
KO
K14416
elongation factor 1 alpha-like protein
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
104693926 (HBS1L)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104693926 (HBS1L)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
104693926 (HBS1L)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
HBS1_N
GTP_EFTU_D2
MMR_HSR1
Astrovir_pp_1
AAA_22
DO-GTPase2
GIP1_N
MMR1
Motif
Other DBs
NCBI-GeneID:
104693926
NCBI-ProteinID:
XP_039424014
LinkDB
All DBs
Position
3:57869703..57930663
Genome browser
AA seq
710 aa
AA seq
DB search
MADLGRPRQRHRGRASETAAAIVMSRHRNVRGYNYDEDFEDDDVYGQSVEDDYCISPSTA
AQFIYSRRDKPATFAEPLEEEYGYEGTDAAADCFPSTHQLTEVDRARLNSCLDQMREVLA
ESIPEQAMVQAVLDTKFDVQKALDLVLSQGSKQNVKTKNKDAVILAKTTKGKTRDSQSTR
MESEIVPKITKMTVSGKKQSMGFEVPCAIAEENGHTNTPQKGLLPEDARVASGVLEAVSK
STLPPQVVQVSEEQNMVPSPAKKSSKAKPQIDVKAELEKRQGGKQLLNLVVIGHVDAGKS
TLMGHLLYLLGNVNKRTMHKYEQESKKAGKASFAYAWVLDETGEERERGVTMDVGMTKFE
TPTKVITLMDAPGHKDFIPNMITGAAQADVAILVVDASRGEFEAGFETGGQTREHGLLVR
SLGVTQLAVAVNKMDQVNWQQERFQEITSKLGQFLKQAGFKESDVAYVPTSGLGGENLVT
RGQSSDLTQWYKGKCLLEQIDSFKPPQRSVDKPFRLCVADVFKDQGSGFCVTGKIEAGYI
QVGERLLAMPPNETCTAKGITLHDEPVDWAAAGDHVNLTLTGMDIIKINVGCVFCDPKEP
IKACTRFRARVLIFNIEVPITKGFPVLLHYQTVSEPATITRLLSVLHKSTGEVTKKKPKF
LAKGQNALIELQTQRPVALELYKDFKELGRFMLRYSGSTIAAGVVTEIKE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atggccgacctaggccggccgcgccagcgccaccgcgggcgggcgagcgagaccgccgcc
gccatcgtcatgtcccggcacaggaacgtccgaggatataactacgacgaagactttgaa
gatgatgatgtgtatggccaatcagtagaagatgattattgcatttctccttcaacagca
gctcaatttatttactccagacgagacaaaccagccacatttgctgagccattagaagaa
gaatatggctatgaaggtaccgatgctgctgctgattgttttccatccacgcatcagttg
actgaagttgatagagcccgtcttaattcatgccttgatcaaatgagagaagttttggca
gagtccataccagaacaagcaatggtgcaagcagtactggatactaaatttgatgtacaa
aaggctttggatcttgtgctttcacaaggcagtaagcaaaatgtgaagaccaagaataag
gatgctgtgattttagcaaagactacaaaaggaaaaacaagggattcccagtcaaccaga
atggaatctgaaattgtgccaaaaattaccaaaatgacagtgtctggaaagaaacaatct
atgggatttgaagttccatgtgcgattgctgaggaaaatggccacactaacacacctcag
aaaggactgttacctgaagacgccagagtagcttctggggtacttgaggctgtctcaaaa
tctactcttccacctcaagtagtgcaggtttcagaagagcagaatatggtgcctagtcca
gcaaaaaagtcaagcaaggcaaaaccacaaatagatgtgaaagcagagttggagaagaga
caaggaggaaagcaactgctgaatttggtggtaataggacatgttgatgcaggcaaaagt
actttaatgggtcatttgctctaccttttgggaaatgtgaacaaaagaactatgcacaaa
tatgaacaggaatctaaaaaggctggtaaagcttcatttgcctatgcatgggtcttggat
gaaactggtgaagaaagagaaaggggagtgacaatggatgtgggtatgaccaaatttgag
acaccgactaaagtaattacgctgatggatgctccaggccacaaagacttcattccaaat
atgatcacaggagctgcacaggctgatgtggcaattttggttgtggatgccagcagagga
gagtttgaggcaggatttgagacaggtggacaaactcgagaacatggattattagtgcgc
tctcttggagtgacgcagctggctgttgcagtcaataaaatggaccaggttaattggcaa
caggaaagatttcaggaaattacaagtaagcttggccaatttcttaagcaagctggcttt
aaggaatcagatgtggcttatgttccaacaagtggccttggtggtgaaaacctagtcaca
aggggtcagtcaagtgacctcacacaatggtataaaggaaagtgtttgttagagcaaatt
gattctttcaaaccaccacagagatcagtggataaaccatttagactgtgtgttgctgat
gtttttaaagaccaagggtcaggattttgtgtgactggtaaaatagaagcaggctatatt
caagttggagaacgacttctggcaatgcctcccaatgaaacttgcactgcaaaaggaatc
acactgcacgatgaaccagttgattgggctgcagcaggagatcacgttaatctcactttg
accggcatggatatcatcaaaatcaatgtgggctgtgtattttgtgatcccaaggaaccc
attaaagcttgcactcggttcagagctcgagttctcatcttcaatattgaggttccaatc
actaaaggatttcctgtgcttttacactatcaaacagtaagtgaacctgctactattaca
aggctgttgagtgtcctgcacaaaagcactggtgaagtgacaaagaaaaaacctaagttc
ttggctaaaggacagaatgctctaatagaactacaaactcaaagacctgttgctttagag
ttgtacaaagattttaaagagctggggaggtttatgttacgctacagtggttccactatt
gctgcaggagttgttacagagattaaagaatga
DBGET
integrated database retrieval system
