Corvus cornix (hooded crow): 104693984
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Entry
104693984 CDS
T03546
Symbol
SMARCAL1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 isoform X1
KO
K14440
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104693984 (SMARCAL1)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
104693984 (SMARCAL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARP
SNF2-rel_dom
Helicase_C
ResIII
ERCC3_RAD25_C
DUF7480
Flavi_DEAD
Hac8_like_N
Motif
Other DBs
NCBI-GeneID:
104693984
NCBI-ProteinID:
XP_010405268
LinkDB
All DBs
Position
7:14591137..14628832
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AA seq
971 aa
AA seq
DB search
MSSGLTEEQKRRIEENRRLALARRAERLAAQRAGHVGIAAPPQKEQSLGNPGNSREENNH
VRVTSQHRQNANSPVEQKSCLQKGCNHYTANQQMAGSHREQQKSYSEDSEQASGLKQFPA
TISNSLNYSHKHYLEAGSQEHGQHTSINLGTFQQPKCYPNAFKNPTGPPHPRLIDSRHPD
GSKDLQTQNKSAIKYVSPPSSAALSDSEMLVNTNRLTESAGGGFVSQAAGRMQKLTSSAG
LGSSFEAASHKKANNVTKGKCVKHGEDRFQVEIGYNAELIAVFKKVPSKAYDPAMKKWNF
SMEDYSSLLKAANQLSSVILAPLEGENAVGLASGSHSVGSGVDVKSLLKMCKNWKKPSAL
VKGKCVLISRLRFEVDIGYSAEVIGVFKQMDSRNYDMNTRKWNFLLEDYPKLMEVLLSLV
SVEVEPLPEAVIRTFAAHLQRSPSQTDIPDADLSVVDSKIVTSLMPFQREGVNFAISRNG
RLLLADDMGLGKTIQAICIAAYYQQEWPLLVVTPSSVRFTWAEAFHRWLPSLSSGSTNVI
MSGKDNLTGSLINIISFDLLSRMDKLLKSTFQVVIIDESHFLKNTKTARCQAAMPLLKAA
KRVILLSGTPAMSRPAELYTQIAAVQPTFFPQFHSFALRYCDARKMPWGWDYSGSSNLTE
LKILLEESIMIRRLKSDVLSQLPAKQRKMVVVAPEGISAKTKAVLAAEAKKMAKGYESKQ
QEKEALLVFFSRTAEAKIRSVVEYILELLESGNNKFLVFAHHKIMLDAVVVELKKKHVEH
IRIDGSTSSAERQSLCQKFQFSEKQAVAVLSLTAANMGLTLSAADLVVFAELFWNPGILI
QAEDRAHRIGQTSSVNVHYLVAKGTADDYLWPMIQEKIKVLGEAGLSETNFSETAESTNY
YAKPDPKQKTIYDLFQKTFSESRDDTDDVLFLEAADAGCEFDSGSALQDREAETCSVSPK
KKRRIEEFFKE
NT seq
2916 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaggccttacagaggagcaaaagagaaggattgaagagaatcgccggctagct
ttggctaggagagcagagaggctggcagcccagagagctgggcatgtgggcatcgctgca
cctccgcagaaagaacagagcctgggcaatccgggaaactcgagggaagaaaataatcat
gtcagggtcaccagccagcaccgacagaatgcaaacagtcctgtggagcagaagagctgt
ctccagaaaggctgtaaccattacacagcaaaccaacagatggctggctcacacagagag
cagcaaaagagttattcagaggactcagaacaagcaagtggccttaagcagttccctgca
acgatctcaaattctctgaattattcccataaacattacttggaagctggtagtcaggaa
catggacaacacacttcaattaatcttggaacattccagcagcccaaatgctacccaaat
gctttcaaaaaccccacaggaccacctcatccaagattaattgatagcaggcaccctgat
ggtagtaaagatttacaaactcagaacaaatctgccatcaaatatgtttcaccaccaagc
agcgccgccctgagtgattcagaaatgctggtaaacacaaacagactgacagaaagtgca
gggggaggttttgtctctcaggctgctggtaggatgcagaagctgaccagctctgctggt
ttgggctcttcctttgaagctgcctcgcacaagaaagcaaataatgttacaaaaggaaaa
tgtgtgaaacacggggaagaccgattccaggtcgaaatagggtataatgctgaacttatt
gctgtgtttaagaaggtaccaagcaaagcctatgatcctgctatgaaaaaatggaatttc
agcatggaagattacagcagtctcttgaaagcagcaaatcaactttcatcagtaattctg
gcaccactggaaggagaaaatgcagttggcttggcatcaggctctcattctgttggcagt
ggggttgatgtgaaatccctcttgaagatgtgtaagaactggaagaaaccctcagccctt
gtcaaagggaagtgtgttcttatctctcgcttacgatttgaggttgatattgggtattct
gcagaagtgattggagtgttcaaacagatggattccagaaattatgatatgaataccaga
aagtggaatttcctgctggaggattaccccaaactaatggaagtgttactgagcctcgtg
tccgtagaagtggagccactgcccgaagcagtaattaggacctttgcagctcatctacag
aggtctccatcacagacagacattcctgatgctgacctttcagtagtggactccaaaatt
gtgacgagcctcatgccctttcagcgggaaggtgtgaattttgcaatttccagaaacgga
cgtttgcttcttgcggatgacatgggcctgggcaagaccatccaggccatctgcattgct
gcctattaccagcaggaatggcccttgctggtggtcactccttcttctgtgaggtttaca
tgggcagaggcatttcacagatggcttccatccttgagttcaggaagcaccaatgtcata
atgagtggcaaagacaacctaacaggaagcttgatcaacatcatcagttttgatctcctc
agcaggatggacaagctgcttaagagcacattccaagtagttatcattgatgaatctcat
ttcctgaagaacacaaaaactgcacgctgccaagctgccatgcctctactcaaggctgcc
aagagagtgatcctgctttcgggaacgccggccatgtcccggcctgcagagctctacacg
cagatcgccgctgtccagccaacgttcttcccacagttccactccttcgcgctgcgctac
tgtgatgccaggaagatgccatggggttgggactactctggatcatccaacttaactgaa
ctgaagattttgctggaggagtccatcatgatccgacgtttgaaatcagatgtgctttcc
cagcttccagcaaagcaacgcaaaatggttgtggtagctcctgaaggcattagtgcaaag
accaaagctgtcttggcagctgaagcaaagaagatggccaaaggatatgaaagtaaacaa
caggagaaggaagctcttcttgtcttcttcagcagaacagcagaagctaaaatccgctca
gtcgtagaatacatcctggagttactggaaagtgggaataataaatttttggtgtttgct
catcacaagataatgctggatgcagtagttgtagagctgaagaagaaacacgttgagcac
attcgcattgatggctccacatcttcagctgagcggcagtctctgtgccagaagttccag
ttctcagagaagcaggctgtggctgtcctttccctcactgctgcaaacatgggcctgaca
ttgtctgctgcagatctggtggtgtttgcagagctcttctggaacccagggattttgatc
caagcagaagatcgggcacatcgaattggacagaccagctccgttaatgttcactacctg
gtggctaaaggcacagcagatgactacttatggccaatgattcaggagaaaatcaaagtg
ctgggcgaagctggtctttcagaaaccaatttctccgaaacagctgagtcaactaattac
tatgctaagccagatccaaagcagaagacgatctatgaccttttccagaagaccttctct
gagagcagagatgacactgatgatgttttgtttttggaggcagctgatgctggctgtgag
tttgactctgggagtgctttgcaagacagagaagcagagacatgttcagtgagtcccaaa
aaaaagcggcgtattgaggagtttttcaaagagtaa
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