Corvus cornix (hooded crow): 104694005
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Entry
104694005 CDS
T03546
Symbol
CLASP1
Name
(RefSeq) CLIP-associating protein 1 isoform X28
KO
K16578
CLIP-associating protein 1/2
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104694005 (CLASP1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
ccw04812
]
104694005 (CLASP1)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
104694005 (CLASP1)
Cytoskeleton proteins [BR:
ccw04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
104694005 (CLASP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
HEAT_GCN1
HEAT_EF3_N
CEP104-like_TOG
TPR_CAND1
HEAT
TOR1L1_N
HEAT_MROH2B_C
Ltn1_1st
HEAT_DAAF5
RTP1_C1
Cnd1
MMS19_N
MMS19_C
ParcG
TPR_20
TPR_DNAAF5
HIGH_NTase1_ass
KH_DEAH11_1st
TAN
Sec7-like_HUS
Motif
Other DBs
NCBI-GeneID:
104694005
NCBI-ProteinID:
XP_019145947
LinkDB
All DBs
Position
7:11434200..11608035
Genome browser
AA seq
1360 aa
AA seq
DB search
MLRKLICRRICTYKIFDDEDSVDGNRPSSASSSTSSKAPANSRRVGMGTTRRLGSAALGS
KSSTAKEGAGAVDEEDFIKAFEDVPTVQIYSSRDLEESINKIREILSDDKHDWEQRVSAL
KKIRSLLLAGAAEYDNFFQHLRLLDGAFKLSAKDLRSQVVREACITLGHLSSVLGNKFDH
GAEAIMPTIFNLIPNSAKVMATSGVVAVRLIIRHTHIPRLIPIITSNCTSKSVAVRRRCF
EFLDLLLQEWQTHSLERHISVLAETIKKGIHDADSEARIEARKCYWGFHSHFSREAEHLY
HTLESSYQKALQSHLKNSDSIVSLPQSDRSSSSSQESLNRPLSAKRSPTGSTTSRASTVS
TKSVSTPGSLQRSRSDVDVNAAASAKSKVTSSGASTPFSSAAALPPGSYASLDGTTSKTE
GRIRTRRQSSGSATSVTSTPADTRGRSRAKVVSQSQRSRSANPAGAGSRSSSPGKLLGSS
YGGGLSSGTSRVQAVPSSSEKRSKIPRSQGCSRETSPNRIGLDFFFKSARSSRIPRPSMS
QGCSRDTSRESSRDTSPARGFPPLASRRHSRSTSALSTADSVGQSDRFGLGQPGRMPASV
NAMRVLSTSTDLEAAVADALLLGDSRSKKKPVRRRYEPYGMYSDDDANSDASSACSERSY
GSRNGGIPHYLRQTEDVAEVLNHCASSNWSERKEGLIGLQNLLKSQRTLSRVELKRLCEI
FTRMFADPHSKRVFSMFLETLVDFIIIHKDDLQDWLFVLLTQLLKKMGADLLGSVQAKVQ
KALDVTRDSFPFDQQFNILMRFIVDQTQTPNLKVKVAILKYIESLARQMDPTDFVNSSET
RLAVSRIITWTTEPKSSDVRKAAQIVLISLFELNTPEFTMLLGALPKTFQDGATKLLHNH
LKNSSNTSVGSPSNTLGRTPSRHSSSRTSPLTSPTNCSHGGLSPSRLWGWSADGLSKHPP
PLSQPNSIPTAPSHKTFRRSYSPSMLDYDTENLNSDEIYSSLRGVTEAIEKFSFRSQEDL
NEPIKRDGKKDCDIVSRDGGLALPTGDVRGSSDIVEGGRMALDNKTSLLNTQPPRAFSGP
RAREYNPYPYADTINTYDKTALKEAVFDDDMDQLRDEVPIDHSDLVADLLKELSNHNERV
EERKGALLELLKITREDNLGVWEEHFKTILLLLLETLGDKDHSIRALALRVLREILRNQP
ARFKNYAELTIMKTLEAHKDSHKEVVRAAEEAASTLASSIHPEQCIKVLCPIIQTADYPI
NLAAIKMQTKVIERISKESLHQLLPDIIPGLLQGYDNTESSVRKASVFCLVAIYSVIGEE
LKPHLAQLTGSKMKLLNLYIKRAQTTNSNSSSSSDVSTHS
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atgttgaggaagcttatttgcagaaggatatgtacttataaaatttttgatgatgaagac
tctgtggatgggaacagaccttcctcagccagctcctctacatcttcaaaggctcctgca
aattcacgcagagttgggatgggcactacccgcagacttggctctgcagctctgggctcc
aagtcttcaacagccaaagagggagcaggtgctgtggatgaagaagacttcattaaggca
tttgaagatgtcccaacagttcagatttattccagccgggatcttgaggaatccataaac
aagatcagagagatcctatcagatgataaacatgactgggaacagagagtttctgcgttg
aaaaagatccgctccttacttttggctggagctgcagaatatgataacttcttccaacac
ttaagacttttggatggagcatttaaattatctgctaaagacctgcggtctcaagtcgta
cgagaggcttgtatcacattgggacatctgtcatcagttctgggaaacaagtttgaccat
ggggcagaagccatcatgccaacaatttttaatctaattccaaatagtgccaaagtcatg
gccacttctggtgttgtagcagttagattaatcattcgacacacgcacatccctcggtta
atacccatcataaccagtaattgtacctccaagtctgttgcagttagaaggcgctgcttt
gagtttttagacttgctattgcaggagtggcaaacacactccttagaaagacacatatca
gtgttagctgaaacaataaagaagggaattcatgatgcagactctgaagccaggatagag
gcaagaaagtgctactggggtttccacagtcacttcagccgagaggcagagcatttgtac
cacaccttggagtcttcctaccagaaggccctgcagtcgcatttgaagaactctgacagc
atcgtgtccttgccacagtcagatcgctcctcctccagctcccaggagagtctcaaccgt
ccactgtctgccaaaagaagtcctactggaagtacaacatctagagcatctacagtaagt
acaaaatctgtgtcaacaccaggatctctgcagcgatcccgcagtgacgtcgatgtgaat
gcagcagctagtgccaagtcaaaagtgacgtcttctggagcatccacccccttcagttct
gctgcagccttgcccccagggtcatacgcatcactagatggtactaccagtaaaaccgag
ggtcggattcgtaccaggagacagagctctggcagtgccacaagcgtcacctcaacccct
gctgatactcgaggccgcagccgggctaaagtagtttcccagtcccagcgatccagatca
gctaatcctgctggtgctggtagccggtctagttctccgggtaagctcttaggaagctcc
tatggtggtggcctgagcagtggaacatccagagtccaggcagtgccatcatcctcagag
aagcgcagcaagattcctcggagccagggatgcagtcgggagacgagtcccaacagaata
ggcctagactttttttttaagtcagcacggagcagtcgtatcccccgacccagcatgagt
caggggtgcagtcgtgataccagccgtgagagcagtcgagatacaagccctgctcggggc
ttccctccacttgcttctcgacgtcattccaggtccactagtgctctctccactgctgat
tctgttgggcagtcagaccggtttggactcggacagccaggcaggatgcctgcttccgtg
aatgccatgcgagtcctgagcaccagcacagatctggaggctgctgtggccgatgcactg
ctgttaggagactccaggagcaagaaaaagccagtgagaagaagatacgagccctatggg
atgtactcggatgacgatgccaacagtgatgcatccagcgcttgctcggagcgctcctat
ggctccaggaacgggggcattccacactacctgcggcagactgaagatgtggctgaggtt
ctgaaccactgcgccagctccaactggtctgaaaggaaagaagggctcataggtcttcag
aatttactgaaaagccaacggacactgagccgagtcgagttaaaaaggctgtgtgaaata
tttactcgcatgtttgctgaccctcacagcaagagagtcttcagcatgtttctggaaacg
ctggttgatttcatcatcattcataaagatgacttgcaggattggctttttgttctcctg
acccagttgctgaagaaaatgggagcagatttgttggggtctgtgcaggcaaaagttcaa
aaagctctggatgtcaccagggattcttttccatttgatcagcaatttaacattttgatg
aggtttattgtagatcagacccagacaccaaacctgaaggtgaaagttgctatcctgaag
tatattgagtccttggcaagacagatggatccaacagactttgtgaactccagtgagaca
agacttgctgtatctagaattataacttggacaacagaaccaaagagctcagatgtgaga
aaggcagcacaaatagtcctgatttctctctttgaactgaacacccctgagtttaccatg
ttacttggtgccttgccaaaaacattccaggatggtgctaccaagctcctgcacaaccac
ctcaagaactccagtaacaccagtgtgggttctcccagcaatacccttggtcggactcct
tcccggcactccagcagcagaaccagccccttaacttcacctaccaactgttcccatggt
ggactgtctccaagtcggctctggggttggagtgcagacgggctgtcgaagcacccccct
cccctttctcagcctaactccatccccactgctccttcccacaagactttcagacgctct
tactctcccagtatgctggattatgacacggagaacctaaactctgatgaaatctacagc
tctcttcgtggagtcacagaagcgattgagaaatttagctttcgtagtcaagaggacctg
aatgagccaatcaaacgtgatggaaagaaagactgtgacattgtatctcgagatggtggc
cttgctctccctaccggtgatgtccgtggaagcagtgacattgtggaaggtggaaggatg
gctctggataacaaaacctccctcctgaacacccagcctccccgcgccttttcagggccc
cgtgctcgggaatacaacccctatccttacgctgacacaatcaacacttacgacaagact
gcactgaaggaagcagtgttcgatgacgacatggatcagcttcgggatgaagtacccatt
gaccattcggatttggtggctgatcttctgaaagagctctccaaccacaacgagcgggtg
gaggagcggaaaggagctctcctggaattgctaaagatcacaagggaagataatcttgga
gtttgggaggagcatttcaagaccattctgctcttgctgctggaaacgcttggagacaaa
gatcattcgataagagccctggcactgcgagtcctgagggagattctacggaaccagccg
gcgaggtttaagaattacgcggagctgactatcatgaaaacactggaagcacataaggat
tcccacaaggaggtcgtcagagctgctgaagaagctgcttccaccctggcgagttccatc
caccccgagcagtgcatcaaggtgctttgccccatcattcagactgcagattatccaatt
aacttagctgccatcaaaatgcaaacgaaagtcatcgagaggatttccaaggaatcgttg
catcagctcctacccgatatcattcctgggttgttacagggctatgataacacggagagc
agtgtccgaaaagccagtgtattttgcctagtggctatttattcagtaattggagaagaa
ctgaaacctcatctcgcacaactcacaggaagcaagatgaagctactaaacttgtatata
aagagggcccagaccaccaacagcaacagcagctcctcttcagatgtttcaacgcacagt
taa
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