Corvus cornix (hooded crow): 104694031
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Entry
104694031 CDS
T03546
Symbol
SNX4
Name
(RefSeq) sorting nexin-4
KO
K17919
sorting nexin-4
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104694031 (SNX4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104694031 (SNX4)
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
104694031 (SNX4)
Membrane trafficking [BR:
ccw04131
]
SNARE
SNARE associated proteins
Others
104694031 (SNX4)
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
104694031 (SNX4)
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
104694031 (SNX4)
Domain-containing proteins not elsewhere classified [BR:
ccw04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
104694031 (SNX4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
CENP-B_dimeris
Indigoidine_A
SWAP1_C
Motif
Other DBs
NCBI-GeneID:
104694031
NCBI-ProteinID:
XP_039411059
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All DBs
Position
7:9314275..9347096
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AA seq
470 aa
AA seq
DB search
MGLPGARLSACAERRGRAPSPMESTEPEPSDSRPVEEEEEEEEEEEEEEEEEEEDDGALA
PPEQPLAAMEDCLAKKMEITVSEAEKRTGRNAMNIQETYTAYLIETRAVESQSEGQCAPV
DSLWRRYSEFELLRNYLSVTYPHIVVPPLPEKRADFVWHKLSADNMDPDFVERRRIGLEN
FLLRVASHPVLCQDKIFYAFLTQEGGWKEMVNETGFQLKADSRLKALNATFRVKNPDKRF
TELKHYSDELQSVISHLLRVRARVADRLYGVYKVHGNYGRVFSEWSAIEKEMGDGLQSAG
HHMDVYAASIDDILEEEEHYADQLKEYLFYAEALRAVCRKHELMQYDLEMAAQDLTSKKQ
QCEELATGTVRTFSLKGMTSKLFGQETPEQREAKIKVLEEQIQEGEEQLKSKNLEGRDFV
KSAWADIERFKEQKNHDLKEALISYAVMQISMCKKGIQVWTNAKECFSKM
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgggtttgcccggagcccggcttagcgcctgcgcggagcgccgcggccgagccccgagc
cccatggagagcaccgagcctgagccgagcgacagccgcccggtggaggaggaggaggag
gaggaggaagaggaggaagaggaggaagaagaggaggaggaagacgacggcgccctcgcg
cccccggagcagcccttggccgcgatggaagactgtttggcaaagaaaatggaaatcacg
gtttcagaagctgaaaaacggactgggaggaatgccatgaacatacaagaaacgtacact
gcttacctcattgagactagagctgttgagtcccagagtgagggacaatgtgcccctgtg
gactccctgtggcgacgttacagtgaatttgagttgctgaggaattatttgtcagttacc
tacccacatattgttgttccacctttgccagaaaaaagggctgactttgtttggcataag
ctatcagcagataatatggatccagattttgtggaaagaagaagaattggtttggaaaac
ttcttgttacgtgtggcttcacatcctgttctttgccaagacaaaatcttctatgctttt
ttaacgcaggaaggtggatggaaagaaatggtgaatgagactggatttcagttgaaggca
gattccagattaaaagctcttaatgcaacattcagagtgaaaaacccagacaagagattt
actgagctaaaacactacagcgatgaactgcagtccgtcatatcacaccttctgcgagtc
agagctagggtagcagaccggctttatggtgtctataaagtccatggcaactacggaaga
gtattcagtgagtggagtgcaatagaaaaggagatgggggatgggttgcagagtgctggc
caccacatggatgtatatgcagcttctattgatgacatactggaagaagaggaacactat
gcagatcagctgaaggaatatctcttctatgcagaagcactgcgggcagtttgcaggaag
catgaactaatgcaatatgatttggaaatggctgcacaggacttaacatctaagaaacag
cagtgtgaggagctggcaacaggaactgtgagaaccttctccctgaaggggatgaccagc
aagctctttgggcaagagacccctgagcagagggaagccaagataaaggttctagaagag
cagatacaggaaggagaagagcaactgaagtctaaaaatctggagggcagagactttgtg
aaaagtgcctgggctgacattgaacggtttaaagagcagaagaatcatgatttgaaggag
gcacttataagctacgctgttatgcagattagcatgtgcaaaaagggaattcaggtttgg
acaaatgcaaaggaatgcttcagcaagatgtga
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