Corvus cornix (hooded crow): 104694035
Help
Entry
104694035 CDS
T03546
Symbol
RAG1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
104694035 (RAG1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104694035 (RAG1)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104694035 (RAG1)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104694035 (RAG1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-RAG1
zf-C3HC4
zf-C3HC4_2
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
104694035
NCBI-ProteinID:
XP_039408870
LinkDB
All DBs
Position
5:complement(43884180..43890309)
Genome browser
AA seq
1065 aa
AA seq
DB search
MHEREQTSLTFGTNWADIAAALQSDSELKKSVASQMDLPEELQHPYTKFSEWKFKLFKLR
SFEKTPSDDSQHINKDQAEEAVSSNKEFILHKDEAVPRGEKMELMGNRQGLEEDAHAMQT
QDNRAHQNNLKELCRICGVSFKTDCYKRTYPVHGPVDDETLWLLRKKEKTATSWPDLIAK
VFKIDVRGDVDTIHPTQFCHNCWSIIHRKFSNTLCEVYFPRNSTMEWQPHSPNCNVCRTT
RRGVKRKSQPPSVQRGKRVKTTGERARLNRGVKNQAQINNKNLMKEIVNCKNIHLSTKLL
AVDYPIDFIKSISCQICDHILADPVETTCRHLFCRTCILKCIRVMGSYCPSCWYPCFPTD
LVTPVKSFLNILDNLSIRCPVKECDEEILHGKYGQHLSSHKEMKDRELYSYINKGGRPRQ
HLLSLTRRAQKHRLRELKRQVKAFAEKEEGGDIKAVCMTLFLLALRAKNEHKQADELEAI
MQGRGSGLHPAVCLAIRINTFLSCSQYHKMYRTVKAVTGRQIFQPLHALRTAEKALLPGY
HPFEWKPPLKNVSTNTEVGIIDGLSGLPLSIDDYPVDTIAKRFRYDAALVCALKDMEEEI
LEGMKAKNLDDYLNGPFTVVVKESCDGMGDVSEKHGSGPAVPEKAVRFSFTVMNISIAHG
NENKRIFEEVKPNSELCCKPLCLMLADESDHETLTAILSPLIAEREAMKNSELLLEMGGI
LRTFRFIFRGTGYDEKLVREVEGLEASGSTYICTLCDATRLEASQNLVFHSITRSHAENL
ERYEIWRSNPYHESVDELRDRVKGVSAKPFIETVPSIDALHCDIGNATEFYRIFQMEIGE
LYKNPDVSKEERKRWQLTLDKHLRKKMNLKPMLKMSGNFARKLMSKETVEAVCELIKCEE
RHEALKELMDLYLKMKPVWRSSCPAKECPELLCQYSYNSQRFAELLSTKFKYRYEGKITN
YFHKTLAHVPEIIERDGSIGAWASEGNESGNKLFRRFRKMNARQSKVYEMEDVLKHHWLY
TSKYLQKFMNAHKTLKSQSFTIDSEGGLDDSLPLEVLENNDSAEL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgcatgagagagagcaaacaagcttgacatttggaacaaactgggcagacatagcagca
gctctacaatctgacagcgagctgaagaagtcagtagcatcacaaatggacctacctgaa
gaacttcagcatccgtatacaaagttttctgaatggaaattcaagctctttaaattgcga
tcatttgaaaaaacaccctctgatgacagccagcacataaacaaagatcaggcagaagag
gctgtttcttcaaacaaagaattcatcctgcataaagatgaagcagtgccaagaggagaa
aagatggagttaatgggcaataggcagggacttgaggaagatgcccatgcgatgcaaaca
caagacaatagagctcatcagaacaatttgaaggaactctgccgcatctgcggagtttca
tttaaaactgattgttacaagaggacttacccagtgcatgggccagtggatgatgaaact
ctgtggcttctgagaaagaaagaaaaaacagcaacctcttggccagaccttattgctaag
gttttcaagattgatgtgcgaggggatgttgatactatccaccccactcaattttgtcac
aactgttggagtattatacatagaaaattcagtaatactctatgtgaagtatattttcct
aggaacagcacaatggagtggcaaccacactccccaaactgtaatgtgtgccgtactacc
agacgaggagtcaagagaaaaagccagcccccaagcgtacaacgtggaaaacgtgtcaaa
accactggggagcgtgctcggctaaacagaggtgtaaagaaccaagcacagataaacaac
aaaaatttaatgaaggagattgtcaattgcaagaatatacatctcagcaccaagctgctt
gcagttgattacccaatagatttcattaaatccatttcttgccagatttgcgatcatatt
ttggcagatccagtggaaacaacatgcagacacttgttttgcagaacttgcatccttaaa
tgtatcagggttatgggcagctattgcccctcctgctggtatccttgctttcctactgat
ctggtaaccccagtgaaatccttcctgaacatccttgataacctgagtataagatgccct
gtaaaggaatgtgatgaagagatcttgcatggaaaatatggccaacacctctccagccac
aaggagatgaaagatagagagctctatagctacataaataaaggtggccgaccaaggcag
cacctcctgtctttgacgaggagagctcagaaacatcgtctgagggaactgaagcgtcaa
gtcaaggcttttgctgagaaagaagagggcggtgatataaaggctgtatgcatgacttta
tttctgctagctttgagagcaaaaaatgaacacaaacaagcagatgaactggaggctata
atgcaagggaggggatctggacttcatcctgctgtctgtctggccatccgaatcaacact
tttctcagctgtagtcagtatcataaaatgtatagaacagtaaaagctgtcactgggagg
cagatcttccagcctttgcatgctcttcgcactgctgagaaagccctcctaccaggttat
cacccatttgagtggaaacctcccttgaaaaatgtatccactaacacagaagtgggaatt
atagatggactatcgggactgccactctcaattgatgactacccagtagacacaattgca
aagagatttcgatatgatgcagccttggtttgtgccttaaaggacatggaggaggagatc
ttggaaggcatgaaagcaaaaaacctggatgactacttgaacggccccttcactgtggta
gtaaaagagtcctgtgatggaatgggagatgtcagtgagaagcatggaagtgggcctgct
gtcccagagaaggctgttcgcttttctttcacagtcatgaacatttctatagcacacggg
aatgaaaacaagaggatctttgaggaagtaaagcccaattcagagttgtgctgcaagccc
ttgtgcctcatgctggctgatgaatcagatcatgaaactctgacggcaatcctgagcccc
ctcatagcagaaagagaggctatgaaaaacagtgaactgctgcttgaaatgggaggcatc
ctgagaacatttagattcatctttaggggtacaggatatgatgagaaacttgtgcgggaa
gtggaagggctggaggcctcaggttccacttacatttgtacgctgtgtgatgcaacccgc
ttggaggcatcccaaaatctggtcttccactccataaccaggagccatgctgaaaatctg
gagcgatatgaaatatggaggtccaacccatatcacgaatctgttgatgagctccgtgac
agagtgaagggtgtttcagccaaaccttttattgagactgttccctccattgatgcattg
cactgtgacattggcaatgcaacagaattctacaggattttccagatggagattggtgaa
ctttacaagaatcctgatgtgtctaaagaggagaggaagaggtggcagctgactcttgac
aaacacctcaggaagaagatgaacttgaagcctatgttgaagatgagtggaaattttgct
agaaagctcatgtccaaggagactgtagaggccgtatgtgaattaataaagtgtgaggaa
aggcatgaagccctaaaagaactaatggacctttatctgaagatgaagccagtgtggcga
tcctcatgccctgccaaggagtgcccagaactgctgtgtcagtacagctacaattcacag
cgttttgcggagctcttatctacaaagttcaagtacagatatgagggcaagattacaaat
tatttccacaaaacacttgctcatgttcctgaaatcattgaaagagatgggtccattggg
gcctgggcaagtgaaggaaatgagtctggaaacaaactgtttaggaggttccgaaaaatg
aatgccaggcaatccaaagtctatgagatggaggatgtcttgaagcaccactggctatat
acctccaagtacctccagaagttcatgaatgctcataaaacattaaaaagccagagcttc
accattgattcagagggtggtttagatgactcgttgccactggaggtcttggaaaacaat
gattcagccgaactctaa
DBGET
integrated database retrieval system
