KEGG   Corvus cornix (hooded crow): 104694228
Entry
104694228         CDS       T03546                                 
Symbol
RIF1
Name
(RefSeq) telomere-associated protein RIF1 isoform X1
  KO
K11138  telomere-associated protein RIF1
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ccw03032]
    104694228 (RIF1)
DNA replication proteins [BR:ccw03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    104694228 (RIF1)
SSDB
Motif
Pfam: Rif1_N
Other DBs
NCBI-GeneID: 104694228
NCBI-ProteinID: XP_039410615
LinkDB
Position
7:complement(1531208..1558937)
AA seq 2323 aa
MSAPGPDPAAPGAGSSLGPLLHTLGDPAAPPGELTDAHLTIVSRLTGEGGKAFAADVRKH
FPQLCKVFKAHISSPNLELSNAALQALGFCTFNSNNTAELSATEIQDLLSAVNSVAVKSS
DKNTRTRALWVISKQAFPPEIVKKEVSSILSTLETILTKGEVQSVVVEYEALNVVIRLME
QTPAQMGEEAVRWAKLIIPLVVHSAHKVQLRGATALEMGMPLLLQKQQEVAAVTEHLMTT
KLISELQKLFSTKNETFVLKLWPLFVRLLGKTLHRSGSFINSLLQLEELGFRSGSPVVKK
IAFIAWKSLIDNFALNPDILCSAKRLKLLMQPLSSIHVRTEALALTKLEVWWYLLMRLGP
HLPSNFEQVCIPLIQSTLSVDPAAAFPGTPSRLPSNPSLGSATPGQKSGPFPFVSPGTPR
MALNTSTAGVVLFPSIQLLGIEMLLHFLMGPQVVDFAKQNKLVLSLEPLQYPLISSPSFF
CKHASTLINAVQDGFIAVGKEVPDCLLNVIWKDINGYVKTAIEAGNKKEKQGSEILTMLL
QALKNTVRSNSLPVQKILSLIDITVKELPPKVLGSPAYQVADMDLLNGTPALFLIQLPFH
NNLLECCVTDERFFVILETLVGYVLSGPTSALAFSESVICVIDQSGKQVGNKEHLWRMWS
IVVNPLTEWINQTNEVNQGDALEHNFSAVYSALLLPVSHIFPAQGFPQPTLKSLLRTWSD
LYRAFARCAALVATAEENLCCEEICAKIISGLEGETPVMFFMLEGLTHLVSVMVDCINFA
PYGTKFQPKTRSPQTPTDWAKKKKEPLGKLASLFKLLLMLLNSFHEFSSKETHSESLISV
GPSLLAALHTIISHISLPSLIGTTFAIFSKPLALFYEKTKLPEVPKVYSNLNSKLEKLLA
EILQCLQCHCPGSCDTELLQQLCPVLCVGFQHRNKQIRHQCAQLWNSTFAKTSSLTYPEE
LKSVLSQAKKKIPLLLPGFESIEMSEECSGPFSDTMENSQLDAKISGMEVKVGQKRDSIL
AQTSEPKNDGKDKSSNVQATPAKLKLEFSSPKTTSETLLEEEKSVDFVFIPPETKPRILT
EHQKEVLRSKRVDIPAMYNNLDASQDTTSFSQYTQSQEDSLEVPPSVENAKEDTANQPQE
ENAGSEGCQSEESPACNNKGESKNETAEMIPEETSVGEGLETSAMEAASEEASARKESTS
NISNSEEESKNETAEMIPEETSIGEGLDTSSEEAASQEASAGKENTSNVSNSSASSDIIS
GTPQPVSRRQSFITLEKFGAAENRPFSPAPLNSVLELSGSAAGAQENTSGSKASAKAEKS
GEENKNPPNPEADAGVTAIRRVTRRQSRMELQGNKSKLLSRSEESLASDSLESSAELCFA
GEDVEHVLLSQSQALHSAEADIKKAEDTIAEVEKAQALDMDSKENTPPDTTSCSEQAPGD
DSQVPQVSPHQKQLRRSSRRRSETVESSSGSQEKEDGLPKRDRRKEEEKAGQKKLSQGKG
DGSQKQKGIPGKTTEITKEGSQPERVAEDWSSKDSPASRGLDEDGSRGGRRAEDSPRAEG
EAQASLSTAGQKVVERPRYHTRRSSQGLLSSIENSEADSSEAKEGSTKKKKHIKVRSRSN
SLEGKMKEGQPGSQSLEVSPQGNETKNSLEATKDEPEVSTGAAVTAEPGGLEIQVIPAAA
GKAVGSGSSESPGALQDTSLEQNKGDASMESLSSSCVSDQDGRAAEENQQEEKQTSTGDC
APAANVSGAEPSSLQSPECPSKRSKRVKKIKSCDCCFKKPKQQVTEFKFMELKKEKTELE
EPQTTPVETPVNVSGHSDLEESLALAPCAMSTPLHPPKEPSTFSMESQGISVDNLQGSSV
VVEENPEGSAGETTESIEEIKEPAELKEETEQVLPESAPGEPRESCLDSRDQGEEPAAAE
KEEVNENGQLEEVPQELNADSKPEEKEMKELEGNQEDKGEAENTAGETCGVADEEVKEEP
LETEIKVAENVALENMSVDSPLKVEGDPSVQVTESPTSLQARCTWSPSASPSTSILKRGV
KRNQEDDSLSPANKIRRVSFANPIFQEGLADDIDRRSPVIRSHSSPSSRSLKTLSNMQHI
TTPTKGFLSPGSRTLKFKSSKKCLITEMAKESLPCPSEFVYPALAGCKAPVDVILPQITS
NICARGLGQLIRAKNIKTVGDLSTLTALEIKTLPIRSPKVSNVKRALKGYHEQQVKSRVL
EESTVPEDAEKPGNNVEEKSLCGDEEKLAADLVDAATTNSSEQPPAALLGQIQALAAQLS
SEDLHGYSGRQLFEMQEKLAGMASCILRNLQSRWQSPPHEGPE
NT seq 6972 nt   +upstreamnt  +downstreamnt
atgagcgctcccggccccgatcccgccgcgcccggcgccggctccagcctcggcccgctg
ctccacaccctgggcgaccccgccgccccgccgggagagctgacggacgcgcacctcacc
atcgtcagtcgcttgactggtgaaggaggcaaagcattcgccgcagatgtcaggaaacac
ttccctcaactctgcaaggtgtttaaggcacacatttctagtccaaacttggagctcagt
aatgcagcattgcaggccttgggattctgcacttttaattcaaataacacagctgaatta
tctgccactgaaatccaggacctgctgtcagcagtgaacagcgttgctgtgaaatcctca
gacaaaaacactcgcactcgggcactttgggtcatctctaagcaggcatttcctccagaa
attgtgaaaaaggaggtgtccagtatcctctcgaccctggaaacaatcctgactaaagga
gaagttcagtctgttgtggttgaatatgaagcacttaatgttgttatacgcttaatggag
caaactccagcccagatgggagaagaggctgtgaggtgggcaaagctgatcatccccctg
gttgtccactcagctcacaaagtgcagttaagaggtgccactgccctggagatgggaatg
ccactgctcctgcagaagcagcaggaggtggcagctgtcaccgagcacctgatgaccaca
aaattaatttccgaacttcagaaattgttttctacaaaaaatgagacctttgtgttaaaa
ctgtggcccctgtttgtgagattgcttggaaagactctgcatcgcagtggcagcttcatc
aactccctgctgcagctggaggagctgggattccgcagtggctccccagtggtgaagaaa
attgccttcattgcatggaagagcctcattgataattttgctctaaatccagacatcctg
tgcagtgctaaaaggctgaaactgctgatgcagcccctgagctccatccatgtgaggaca
gaggctctggcactgaccaaactggaggtgtggtggtatttactgatgagactgggacct
catctgccttcaaactttgaacaggtttgtatcccattaatccaaagcaccctgagtgtg
gatcctgctgctgcattcccaggaacgccctcacgcctgccaagcaaccccagcttgggc
tcagcaacccctgggcagaaatcaggtcctttcccgtttgtgagcccaggcacgcccagg
atggccctgaacaccagcacagcaggagtggtgctgttcccttccatccagctcctggga
attgaaatgctgctccacttcctcatgggaccacaagttgtggattttgctaagcaaaac
aaactggttcttagtttagagcctctccagtacccactgatcagtagcccttcttttttt
tgtaagcatgccagcactctgataaatgctgttcaggatggctttattgcagttggaaaa
gaagttcctgattgtttgctgaatgttatctggaaggacataaatggatatgtaaaaaca
gcaattgaagcaggaaacaagaaagaaaagcaaggctcagaaatactgaccatgttactc
caggccttaaaaaacactgtgagatcaaattctcttcctgtgcagaaaatactgtccctc
attgacatcactgtcaaggagttgcctccaaaagtattgggatcaccggcttatcaggtt
gctgatatggatcttttaaatggaactccagctttgttcttaatccagctgcctttccat
aataacctcttggaatgctgtgtgacagatgagagattctttgtgattctggaaactctg
gtgggttatgtcctgtctgggcccacctcggccctggctttcagtgagtctgtgatctgt
gtcattgaccagagtggaaagcaggtggggaacaaggagcacctctggagaatgtggagt
attgttgttaatcctctgactgagtggattaatcagactaacgaggtgaaccagggggat
gccttggagcacaacttcagtgctgtgtacagtgctttgttgctgccagtatcccacatc
ttccctgctcagggattcccacagccaactttgaaatccttgttgcgcacgtggtcagac
ctgtaccgagcttttgctcgctgtgctgctctagttgcaacagcagaagaaaacctgtgc
tgtgaagaaatttgtgccaaaataatatctgggctagaaggtgaaactccagtaatgttt
ttcatgctggaaggcctcactcaccttgtgtcagtcatggtggactgcatcaactttgca
ccctatggaactaaattccagccaaaaactagatctccccagacacccacagattgggct
aagaagaaaaaggagccccttggcaagcttgcctctctcttcaagctcctgctgatgctc
ctgaactctttccatgagttcagctccaaagaaacccattcagaatccctgatttctgtg
gggccttccctcctggctgctctccacaccatcatcagccacatctcgctgccttcactc
attggcaccacatttgccattttttccaagcccttggcactgttctatgaaaaaaccaag
ctccctgaggtacccaaagtctacagcaaccttaacagcaagcttgagaagctgctggca
gagatcctgcagtgcctgcagtgtcactgcccgggctcctgtgacactgagctcctgcag
cagctctgccccgtgctctgcgtgggcttccagcacaggaacaaacagatccgccaccag
tgtgcccagctctggaactccacctttgccaagacctcctctctgacttaccccgaggaa
ttaaaatctgtgttaagccaagccaaaaagaaaatccctctgctgctgcctggttttgaa
agcattgagatgtctgaggagtgcagtggccccttctctgacacgatggagaattcccag
ctggatgcaaagatcagtggaatggaggtgaaggtgggacagaaacgagattcgatattg
gcacagacgagtgaaccaaaaaatgatggcaaagacaagtccagcaacgtgcaagcaaca
cctgcaaagttgaaactagaattttcatctcctaagactacaagtgagacgcttctggaa
gaggagaaatctgttgattttgtgtttattcctcctgaaacaaaaccaagaatattgaca
gaacatcaaaaagaagtgctaaggtcaaagagagttgatattcctgccatgtacaacaac
ttggatgcatcacaggacaccacctcattttcccagtacactcagagccaggaagattct
ttggaagtaccaccttcagtagaaaatgccaaagaagacactgcaaaccaacctcaggag
gaaaacgcagggagtgaaggatgtcagtcagaggagagcccagcctgcaacaacaagggg
gagtccaaaaatgagacagctgagatgatcccagaggaaacatcagttggagagggattg
gagacaagtgctatggaagcagcttccgaggaggcctcagcgcggaaggagagcacctca
aatatcagcaacagcgaggaggagtccaaaaatgagacagctgagatgattccagaggaa
acatccattggagagggcctagacacaagttctgaggaagcagcttctcaggaggcctcg
gcagggaaggagaacacctcaaatgtcagcaacagctcagcttccagcgacatcatctct
ggcaccccccagcccgtgagccggcgccagtccttcatcaccctggagaaattcggggct
gcagagaacaggcccttcagcccagccccactgaactctgtgttagagctctctgggagt
gctgctggggcacaggaaaacaccagtggcagcaaggccagtgctaaagcagagaaatct
ggagaggaaaataaaaaccctccaaatcccgaggctgacgcgggggttacggcgatccgc
agggtgacgcgccggcagagcagaatggagctgcaagggaacaaatccaagctcctgagc
aggtcagaggagtccctggcctctgacagcctggaaagcagtgctgagctgtgctttgca
ggggaggacgtggagcatgtcctcctgagccagtcccaggctctgcactccgcggaagca
gacatcaaaaaagccgaggatacaatcgcagaagtggaaaaggcccaggcactggacatg
gactcgaaggaaaacacccccccagataccaccagctgctctgagcaggccccaggggat
gacagccaggtgccacaggtgtcccctcaccagaagcagctccggcgttcctccaggaga
cgctcagagactgtggagagctcctcagggagccaggagaaggaggatgggctcccaaag
agagacaggaggaaagaggaggagaaggctgggcagaagaagctgtcacagggtaaaggt
gatggatcccaaaagcagaaaggaattcctgggaaaacaacagaaatcacaaaagagggc
agccagcctgagagagtggcagaggactggagctccaaggactctcctgcttcccggggc
ctggatgaggatgggagcagaggtggcaggagggcagaggattccccaagggctgagggg
gaagctcaggccagcctcagcacagcagggcagaaggtggtggagcgcccacggtaccac
accaggagatcttcccaaggtttgctctccagcatagaaaactccgaggctgacagctct
gaggccaaggagggcagcacgaagaagaaaaaacacataaaagtgaggagtagaagcaat
tctcttgagggtaaaatgaaagagggacagccagggagccagagccttgaggtgtctccc
caagggaatgaaactaagaattcactggaagccactaaagatgaacctgaggtcagcaca
ggtgctgcagtgacagctgaaccaggtggcctggaaatccaggtaattcctgcagctgct
ggaaaagctgtagggtctggcagctctgagagtcccggtgctctgcaggacaccagcctg
gagcaaaacaagggtgatgcttccatggagtcactgagcagctcctgtgtgtctgaccag
gatgggagagcagcagaggaaaaccagcaggaggagaagcaaaccagcacaggggactgt
gcaccagcagcaaatgtttcaggtgctgagccctcctctctgcaaagccctgagtgtcca
agcaagagaagcaaaagggtgaaaaaaatcaagagctgtgattgctgctttaaaaagcca
aagcagcaggtgactgaattcaagttcatggaattaaaaaaggagaaaactgagctggag
gagccccagaccaccccagttgagacacctgtgaatgtttctggtcactcagatttggag
gagagcttggccctggctccttgtgcaatgagcactccattgcaccctcccaaggaaccc
agcaccttcagcatggaaagccagggaatttctgtggataacctgcagggcagcagtgtg
gtggtggaggagaatccagagggttcagcaggtgaaaccaccgagtccatagaggaaata
aaggaacctgctgagctgaaggaggaaacagaacaggttctgcctgagagtgctccagga
gagcccagggagagctgcctggactcacgggaccaaggggaagaaccagcagctgcagaa
aaggaagaagtaaatgaaaatggacaactcgaagaggtgccccaggaactgaatgctgac
agcaaacctgaggaaaaagagatgaaggagctagagggaaatcaggaggataaaggagaa
gctgagaacactgcaggagaaacttgtggtgttgcagatgaagaggtgaaggaggaaccg
ttggaaactgaaataaaagtggctgaaaacgtggccttggaaaatatgagtgtggattcc
cctctgaaggtggaaggggacccctcagtgcaggtgactgaaagccccaccagcctccag
gctcgctgcacgtggtccccctcagcctccccatccaccagcattctgaagagaggggtc
aaaaggaaccaggaggatgactccctgtcacctgctaataagatccgccgagtctccttt
gcaaatcccatttttcaggagggcctggcagatgacatcgacaggaggagtcctgtcatc
agatcccattcctcaccctcttccagaagtcttaaaaccctctctaacatgcagcacatt
accactccaaccaaaggatttctgtccccaggatctcgtacccttaaatttaagagctca
aagaagtgtttaatcacagaaatggccaaggaatctctgccatgcccttcggaatttgtg
tatcctgccttggctggctgcaaagctcccgtggatgtcattttacctcagatcacatcc
aacatctgtgccaggggcctggggcagctcatccgagccaagaacatcaagaccgtggga
gacctgagcactctgacagctttggaaatcaaaactctccccatccgctctcccaaagtc
tccaatgtcaaaagagctctgaaaggataccacgagcaacaggtgaaatctcgagtgttg
gaggaaagcacagtgcctgaagatgctgaaaagcctggaaataatgtggaggagaaatct
ctctgtggagatgaggaaaaacttgcagcagatttggtcgacgcagccaccaccaacagc
agcgagcagcccccggcagctctcctggggcagatccaggctctggctgctcagctgagc
tctgaagatctccatggatattctggcaggcagctgtttgagatgcaggagaagctggca
gggatggcctcgtgcatcctgaggaacctgcagtcccgctggcagtcccctccccacgag
ggccccgagtag

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