Corvus cornix (hooded crow): 104694250
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Entry
104694250 CDS
T03546
Symbol
RHBDL3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104694250 (RHBDL3)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
104694250 (RHBDL3)
Peptidases and inhibitors [BR:
ccw01002
]
Serine peptidases
Family S54: Rhomboid family
104694250 (RHBDL3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_6
EF-hand_1
EF-hand_11
EF-hand_8
DUF5580_M
EF-hand_9
AIF-1
EH
Motif
Other DBs
NCBI-GeneID:
104694250
NCBI-ProteinID:
XP_039418267
LinkDB
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Position
18:8234705..8307248
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AA seq
407 aa
AA seq
DB search
MGDKLPEPHASPSPAVAASSEAEEIEVLDSEDVLPMAAEDHWKALFDQFDPDNTGYISTE
KFRSLLQRHSSELDPHKLEVLLALADSNSEGRICYQDFVNLMSNKRSNSFRQAILQGNRR
LCSKALLEETGLSLSQRLIRHVAYETLPREIDRKWYYDSYTCCPPPWFMITITIVEVAFF
LYNGVVLDRFVLQVSHPLYLKNALLYHPQLRAQAWRYLTYIFMHAGIEHLGLNVVLQLLV
GVPLEMVHGAARISFVYVAGVVAGSLAVSVADMRAPVVGSSGGVYALVSAHLANIVMNWS
GMKCQFKLLRMAVALICMSFEFGRAVWLRFHPSAYPPCPHPSFMAHLGGVMVGITLGVII
LRNYEQRLQDQTLWWIFLSIYIIFVLFAIFWNIFAYSLLDLKLPPPP
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgggagacaagctgccggagcctcacgccagcccttcccctgctgtggctgccagctcg
gaggcggaagaaatcgaggtgctggactccgaggatgtcctacctatggccgcagaggat
cactggaaagccctatttgatcagttcgatcctgacaacactggctacatcagcactgag
aagtttcgctcccttctccagagacacagctcggagctggatccccacaagctggaggtc
ctgctagccctggcagacagcaactctgaggggaggatctgctaccaggatttcgtcaac
ctgatgagcaacaaaaggtcgaacagtttccgccaagccatcctccaggggaacaggagg
ctgtgcagcaaggccctgctggaggagacaggactgagcctctcacagaggctgatccgg
cacgtggcatatgagaccctgccacgggagattgaccgcaagtggtactacgacagctac
acctgctgccccccgccctggttcatgatcaccatcactattgtagaggttgcctttttt
ctttacaatggagtggtcttagacagatttgtgctgcaagtcagccaccccttgtacctg
aagaatgcattactgtaccatccccagcttcgggcccaggcttggaggtacctaacctac
atattcatgcatgcagggatagaacaccttgggctcaatgttgtccttcagctcttggtt
ggggttcctctggaaatggtgcatggagctgcgaggatcagttttgtgtatgttgcagga
gttgtggcagggtccctggcagtgtcagtggctgacatgagagcacctgtggtgggctcc
tctggaggtgtgtatgctcttgtctctgctcacctggccaatattgtgatgaactggtca
ggaatgaagtgccaattcaaactgctgcgcatggctgttgccttgatctgtatgagcttt
gaatttggaagagccgtgtggctgcgattccacccctctgcttacccgccatgccctcac
cccagcttcatggctcacctgggaggggtgatggttggaatcacccttggtgtcatcatc
ctgaggaactatgagcagagactccaagatcagactttatggtggatcttcctttctatt
tacataatttttgtcttgtttgccatcttctggaatatttttgcctacagtctgttggat
ctaaagctacctcccccaccttaa
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