Corvus cornix (hooded crow): 104694369
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Entry
104694369 CDS
T03546
Symbol
GRIN2C
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2C
KO
K05211
glutamate receptor ionotropic, NMDA 2C
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04020
Calcium signaling pathway
ccw04080
Neuroactive ligand-receptor interaction
ccw04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
104694369 (GRIN2C)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
104694369 (GRIN2C)
04082 Neuroactive ligand signaling
104694369 (GRIN2C)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ccw04040
]
104694369 (GRIN2C)
Ion channels [BR:
ccw04040
]
Ligand-gated channels
Glutamate (ionotropic)
104694369 (GRIN2C)
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Gene cluster
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
ANF_receptor
NMDAR2_C
SBP_bac_3
Motif
Other DBs
NCBI-GeneID:
104694369
NCBI-ProteinID:
XP_039418247
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All DBs
Position
18:5501162..5515816
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AA seq
1333 aa
AA seq
DB search
MGRAPAHALLLSMVLGCSAAFTDILLPGPEEPVVNVAVVFGGTSYPLHIRSRLSPQSFLD
MPLEIHPITVVVNNTNPSTLLTQICNILASHKIHGIVFEDNVGTEAVAQILDFISSQTQV
PIISISGGSAVVLTPKEPGSAFLQLGVSIEQQIQVIFKVLEEYDWGSFAVITSLYPGYNI
FLDVIRSFTDASYFGWELQEVLTFEMSQEQSSSRMQRLLRQIDAQVLIVYCSREEAEYLF
SMAEQAGLVGPGYVWIVPSMTVGNMEVPPSSFPVGLISVVTESWKLSLRQKVRDGVAIIA
MGAASFFRAHGYLPEVGRDCWTPTRATATNTSFYRHLLNVTWEHRDFSFNEGGYLVRPTM
VVITLNQHRLWEMVGKWEKGIIHMKYPVWPRYGSFMQPVVDNRHLTVATLEERPFVIVEN
TDPSTGVCVRNTVPCRKQTNSSQSGDGLVDPYTKLCCKGFCIDILKKLAKTVKFSYDLYL
VTNGKHGKIVRGVWNGMIGEVYYKRADMAIGSLTINEERSEIVDFSVPFVETGISVMVAR
SNGTVSPSAFLEPYSPAVWVMMFVMCLTVVAITVFVFEYFSPVGYNQNLTSGKRPGGPTF
TIGKSVWLLWALVFNNSVPIENPKGTTSKIMVLIWAFFAVIFLASYTANLAAFMIQEQYI
DTVSGLSDRKFQRPQEQYPPFRFGTVPNGSTERNIRSNYPDMHTHMVKYNQRSVEDALTS
LKMGKLDAFIYDAAVLNYMAGKDEGCKLVTIGSGKVFATTGYGIALQKDSHWKRAIDLAL
LQFLGDGETQKLETVWLSGICQNEKNEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEH
LVYWKLRHSVPKSHKLDFLLAISRGIYSCFNGVQSLSSPGRAPTPDVTASSAQANVLKML
QAAKEMVTTASVGGSLEQATRTIEDWSNHSERLQTTFSLRTPQLVVQNSTGAHRGPXSGP
HPTERLGRAYAPKGAPLGLPLPQPIPVDSRLHGEENWRGANEHLHLLHPLKFRGGCVGDE
ALTGFPHLLVKTSPGGDYGEQVLVGNHVGAPLPPPTSPRDLPPPDIYREHKRPSGRGDRL
QNNPLLQRDGAHGSSGTLPRLLSAAEKKREVGSAFLPPSCSRGAFPKVTRTCRARGEPAR
QEAAVMEREKPNRWASSARAPGERGEKRRPGGLRRCGAARPPARTDVPDLFPEAEAGYGC
GSRCPQAAGRLPPRSPVTRLPSYREACRQNPRATATVPACAPHACMNSYANLPLYAGHLS
RGSPPPREHPGVHPCDRGSGRWDSACRDCGRRGELAFLRALGAERRDPLVARGVASPCAG
GSWRRVSSLESEV
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atgggcagagcgccggcgcacgctctgctactgtcgatggtgctgggctgctcggctgcc
ttcacggacatcctgctgccgggccctgaggagccggtggtcaacgtggccgtggtgttt
gggggcacgtcctaccccctgcacatccgctcccgcctgagcccccagagcttcctggac
atgcccctggagatccaccccatcactgtcgtcgtcaacaacaccaaccccagcaccctc
ctcacccagatctgcaacatcctcgccagtcacaagatccacggcatcgtctttgaggac
aacgtgggcacggaggccgtggcccagatccttgacttcatctcctcccagacccaggtc
cccatcatcagcatcagtggcgggtctgcagtggtcctgaccccaaaggagcccggatca
gctttcctgcagttgggtgtctccatcgagcagcaaatccaggtgatcttcaaggtgctg
gaggaatacgactggggctcctttgctgtcatcaccagcctctacccaggctacaacatc
ttcctggatgtcatccgctccttcacggatgccagctacttcggctgggagctgcaggag
gtgctcaccttcgagatgagccaggagcagagcagctccaggatgcagcggctcctgcgc
cagatcgatgcccaggtcctcattgtttactgctcccgagaggaggccgagtatctcttc
tccatggcggaacaagctgggcttgtggggccaggatacgtctggatcgtgcccagcatg
acagtaggcaacatggaggtgccgccctcctccttccctgtcggcctcatcagcgtggtg
acagagagctggaagctgagcctgaggcagaaggtgcgggatggggtggccatcattgcc
atgggggcagccagcttcttccgtgcccatggctacctcccagaggtggggcgggactgc
tggacccccaccagggccacagccaccaacacaagcttctaccggcacctcctcaatgtg
acgtgggagcacagggacttctccttcaatgaaggtggctacctggtcaggcccaccatg
gtggtgatcacgctcaaccagcaccggctctgggagatggtgggcaagtgggagaaaggc
atcatccacatgaagtacccggtgtggccccgctacggctccttcatgcagcctgtggtc
gacaaccgccacctgacagtggccaccctggaggagagacccttcgtcatcgtggagaac
acggaccccagcactggggtctgcgtgcgcaacaccgtgccctgccgcaagcagaccaac
tcctcccagagtggcgatggcctcgtggatccctacaccaagctgtgctgcaaaggtttc
tgcatagacatcctgaagaagctggccaagacagtgaagttctcctacgacctctacctg
gtgaccaatggcaaacatggcaagatcgtccgtggggtctggaatggcatgattggtgag
gtgtactacaagcgtgcagacatggccatcggctccctcaccatcaacgaggagcgctcc
gagattgtggatttctccgtgccctttgtggagacgggcatcagcgtcatggtggcccgg
agcaacggcaccgtgtccccctccgctttcctggaaccttatagtccagccgtgtgggtc
atgatgttcgtcatgtgcctcaccgtggtggccatcaccgtcttcgtgttcgagtatttc
agccccgttggctacaaccagaacctcaccagtggcaagaggccgggaggtcccaccttc
accatcggcaagtccgtgtggctgctgtgggctctggtcttcaacaactcagtgcccatc
gagaatcccaagggcaccaccagcaagatcatggtgctcatctgggctttcttcgctgtc
atcttcctcgccagctacacagccaacctggctgccttcatgatccaggagcagtacatt
gacactgtgtcggggctgagtgacaggaagttccagaggccgcaggagcagtacccaccc
ttccgctttggcactgtccccaacggcagcaccgagaggaacatccgcagcaactacccc
gacatgcacacccacatggtgaagtacaaccagcgctctgtggaggacgccctcaccagc
ctcaaaatggggaagctggatgccttcatctacgacgcggcagtgctcaactacatggcg
ggcaaggacgagggctgcaagctggtgaccatcggcagtgggaaggtgtttgccaccacg
ggctacggcatcgccctgcagaaggactcacactggaagcgggccatcgacctggccctg
ctccagttcctgggagacggagagacccagaagctggagacggtttggctgtcagggatc
tgccagaatgagaagaatgaggtgatgagcagcaagctggacatcgacaacatggccggg
gttttctacatgctgctggtggccatggggctgagcctgctggtcttcgcctgggagcac
ctcgtctactggaagctgcgtcactctgtccccaagtcccacaagcttgacttcctcctg
gccatcagcaggggcatctacagctgcttcaatggggttcagagcctgtcgagccccggg
cgggcgcccacacccgatgtcactgccagctcagcccaggccaacgtgctgaagatgctg
caggctgccaaggagatggtgacaacagccagcgtgggcggctcgctggagcaggccacc
cgcaccatcgaggactggagcaaccacagcgagcgcctccagaccaccttctccctgagg
acaccccagcttgtggtgcagaacagcaccggcgcacaccggggccccncctctggcccg
caccccaccgagaggctggggagagcctacgctcccaagggtgctcccctggggctgccg
ctgccccagcccatccctgtggactcccgtctgcacggggaggagaactggagaggggca
aacgagcacctccacctgctacaccccttgaagtttcggggtggctgtgtaggggatgaa
gcccttacaggtttcccccacctcctggtgaagacttccccaggaggggattatggggag
caggtgctggtggggaaccatgtcggggctcccctcccgccccccacatcccccagggac
ctcccaccaccggacatctacagggagcacaagcggccatcggggcggggggaccggctc
caaaacaaccccctgctccagagggacggggcacacgggagctcagggactctgcctcgg
ctgctctcggcagcggagaaaaagcgggaggtgggcagcgccttcctgcctccatcctgc
tctcgcggagccttcccgaaagtcaccaggacttgcagagccaggggcgagccggcgcgg
caggaggcggcggtgatggagcgggagaagccgaaccggtgggcgagctcggccagggcg
cccggggagcgcggcgagaagcggcgtcccggggggctgcggcgctgcggggccgctcgc
ccgcccgcccgcaccgacgtgcccgacctcttccccgaagccgaggccggctacggctgc
ggctcccgctgtccacaggccgctggccggctcccaccgcgctcgcccgtgaccaggctg
ccgtcctaccgggaggcttgccggcaaaacccccgtgccaccgccaccgtgccggcgtgc
gcgccccacgcctgcatgaactcctacgccaacctgcccctctacgcgggacacctctcg
cgggggtccccgccgccccgggagcaccccggggtgcacccctgtgaccgggggtccggg
cgctgggacagcgcctgcagagactgtgggaggcgcggggagctggcctttctgcgggcg
ctgggggcggagaggagggacccgctggtggcccgcggggtggcgagtccctgcgccggc
gggtcctggcggcgggtctccagcctggagtcggaggtgtga
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