Corvus cornix (hooded crow): 104694398
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Entry
104694398 CDS
T03546
Symbol
MGAT5B
Name
(RefSeq) alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B isoform X1
KO
K09661
mannosyl alpha-1,6-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase, isozyme B [EC:2.4.1.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw00510
N-Glycan biosynthesis
ccw00515
Mannose type O-glycan biosynthesis
ccw01100
Metabolic pathways
Module
ccw_M00075
N-glycan biosynthesis, complex type
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00510 N-Glycan biosynthesis
104694398 (MGAT5B)
00515 Mannose type O-glycan biosynthesis
104694398 (MGAT5B)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
ccw01003
]
104694398 (MGAT5B)
Glycosyltransferases [BR:
ccw01003
]
Glycan extension
Wide specificity
104694398 (MGAT5B)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_18
Motif
Other DBs
NCBI-GeneID:
104694398
NCBI-ProteinID:
XP_039418265
LinkDB
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Position
18:complement(4135792..4200464)
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AA seq
796 aa
AA seq
DB search
MITVNADGKIMVRRCLVTLRPFRIFVLGIGFFTLCFLMTSLGGQFSAKRLGDSPFTIRTE
VMGALESRGVLRRMSDMLEMLMKRMDILARLENSTEFHRGDEARFPLDRFQPAAGLMERI
QAIAQNVSDIAIKVDQILRNSLLNGKVMEGRRDQCEVPRDPKYPDCAGKVEWMRARWTSD
PCYAFFGVDGTECSFLIYLSEVEWFCPPLPWRNRTVAVPSPPVPPRAQAAFRRDLARLLE
LIGTGKESLSFMKKRIRHLAQQWLRAARRLEQKLAGRQRDQKHILIHIGFLTEESGDVFS
PRVLKGGPLGEMVQWADILAALFVLGHSLRVTVSLKELQSHLGVPPGRGNCPLTSPLPFD
LIYTDYHGLQQMKQHMGLSFKKYRCRVRVIDTFGTEPAYNHEEYATLRGYRTNWGYWNLQ
PAQFMTMFPHTPDNSFMGFVSEELNQTERQLIKASKVSSMAVVYGKEASIWKLQGKEKFL
AILNKYMEIHGTVYYETQRPPEVPAFVKNHGLLPQHEFQQLLRKAKLFIGFGFPYEGPAP
LEAIANGCVFLQARFNPPHSSLNHEFFRGKPTSREVSSQHPYAEDFIGKPHVWTVDYNNS
EEFEAAIKTIMRTQVDPYLPYEYTCEGMLERIHAYIQHQDFCTTSSLPPSPKTKSPAMQS
PPSLLALSPNATHLVWSPSAGRVPQAWPPVASLQVWVSEPQHTCTETCRRHGLVCEPTFF
RFLNKEEVFLQLSIACDSTEYEMNHLYPAVAENVHECYLQKEPLLFSCAGYNTKYRRLCP
CRDFRHGQVALCRDCL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgatcacagtcaacgcggatggcaagataatggtcagaagatgcctcgtcaccttgaga
ccctttaggattttcgtgctgggcattggatttttcacgctgtgcttcctgatgacatcg
ctgggagggcagttctcagccaagcgcctgggggactcccccttcaccatccgcaccgaa
gtgatgggcgcgctggagtcccgaggggtgctgcgcaggatgagcgacatgctggagatg
ctgatgaagaggatggacatcctggccaggctggagaacagcacggagttccacagaggg
gatgaagcacgattccctctggacaggttccagccagcagctgggttgatggagaggatc
caggccatagctcagaacgtgtcggacattgcaataaaagtggatcagattctccggaac
agcctcctgaatgggaaagtgatggaaggcaggagggatcagtgtgaggtgcccagggac
cccaaataccccgactgtgcagggaaggtggagtggatgagggcccgctggacctctgac
ccctgctatgcgttttttggagtggacggcaccgagtgctccttcctcatctacctcagc
gaggtcgagtggttctgcccgcccctgccctggcgaaaccggacggtggccgtgccctcg
ccgccggtgccgccccgggcacaggcagctttccggagggacctggctcgcctgctggag
ctcatcggcacgggcaaggagtccctgagcttcatgaagaagaggatccggcacctggcc
cagcagtggctgcgggcggcgcggcgcctcgagcagaagctggcggggcggcagagggac
cagaaacacatcttgatccatattggcttcctgacagaggagtcgggggacgttttcagc
ccacgggtgctgaagggaggccccctgggtgagatggtgcagtgggctgacatcctggct
gccctcttcgtgctgggacacagcctgagggtcacggtctccctgaaggagctgcagagt
cacttaggggtgcctccaggacgggggaactgccccttgaccagtcccctgcctttcgac
ctgatttacaccgactaccacggcctccagcagatgaagcagcacatggggctctccttt
aagaaatacaggtgccgtgtccgggtcatcgacacgtttgggacagagccggcctacaac
cacgaggagtacgccacgctgcgcggctaccgcaccaactggggctactggaacctgcag
cccgcccagttcatgaccatgttccctcacacccctgacaactccttcatgggcttcgtg
tcggaagagctcaaccagaccgagaggcagctcatcaaggccagcaaagtgagcagcatg
gccgtggtgtacggcaaggaggccagcatctggaagttgcagggcaaggagaagttcctg
gccatcctcaacaagtacatggagatccacggcacggtttattatgagacacagaggcca
cccgaggtgccggcgttcgtgaagaaccacgggctgctgccccagcacgagttccagcag
ctgctgaggaaggcaaagctcttcattggctttggattcccttacgagggcccggccccg
ctggaggccatcgccaacggctgcgttttcctgcaggcgcggttcaaccctccccacagc
tccctcaaccacgagttcttccgcgggaagcccacgtccagagaggtgtcctcccaacac
ccatatgctgaagacttcattgggaagccccacgtgtggactgttgactacaacaactcc
gaggagttcgaagctgccatcaaaaccatcatgaggacacaggtggacccttacctgcct
tacgagtacacctgcgaggggatgctggagcggatccacgcctacattcagcaccaggat
ttctgcaccacgtcatctcttcctccatctcccaagaccaagagtcctgctatgcaaagc
cctccaagcctgctggccctgtcccccaatgccacccacctggtgtggtctcccagcgct
gggcgggtgccccaggcgtggcccccggtggcgtcgctgcaggtgtgggtgtcggagccc
cagcacacgtgcacggagacgtgccggcggcacgggctggtctgcgagcccaccttcttc
aggttcctcaacaaggaggaggtgtttctccagctcagcatcgcctgcgacagcaccgag
tatgagatgaaccatctgtaccccgcggtggccgagaacgtccacgagtgctacctccag
aaggagccgctgctcttcagctgcgccggctacaacaccaagtaccggcgcctctgcccc
tgccgcgacttccgccacggacaggtggctctgtgcagggactgcttgtga
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