Corvus cornix (hooded crow): 104694434
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Entry
104694434 CDS
T03546
Symbol
LAMP2
Name
(RefSeq) LOW QUALITY PROTEIN: lysosome-associated membrane glycoprotein 2
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03272
Virion - Hepatitis viruses
ccw03273
Virion - Lassa virus and SFTS virus
ccw04140
Autophagy - animal
ccw04142
Lysosome
ccw04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
104694434 (LAMP2)
03272 Virion - Hepatitis viruses
104694434 (LAMP2)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
104694434 (LAMP2)
04142 Lysosome
104694434 (LAMP2)
04140 Autophagy - animal
104694434 (LAMP2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104694434 (LAMP2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ccw04147
]
104694434 (LAMP2)
04090 CD molecules [BR:
ccw04090
]
104694434 (LAMP2)
Membrane trafficking [BR:
ccw04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
104694434 (LAMP2)
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
104694434 (LAMP2)
Other autophagy associated proteins
RNautophagy/DNautophagy
104694434 (LAMP2)
Exosome [BR:
ccw04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
104694434 (LAMP2)
CD molecules [BR:
ccw04090
]
Proteins
104694434 (LAMP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
104694434
NCBI-ProteinID:
XP_039428249
LinkDB
All DBs
Position
4A:complement(9687282..9701411)
Genome browser
AA seq
481 aa
AA seq
DB search
MESSGGAERRLAARGRPRPAPHMTAGEVFVAPARRPPVSXTAGSGSSTTAMGPSRSAASS
CRRFLLPLLLLGVSGFFQSYAVEVDIKDASNATCLYADWMMRFLITYESNNGDYKTTTLN
LSSSVTHNGSVCGNDTQAALVAVQFGEGHSWSINITKNNETYQGDFITLTYNTNDTAVFP
DAKRKGPVTVLVKDPLHPVQLNTVFVCHNSYFIEAENITQIFWNVTMQAFVQNGTVSKKE
SRCPADTPTSAPTVPPTIANVTTAFTTTLAPAPTTAPKPVENPDTGNYSLKSGNKTCFLA
TVGLQLNVSQDKPLLININPKTTVADGACGNTTATLKLNDGNSTLIGFTFAVKNTSASVQ
KFYLREVNVTLLSRLNGSVISSADNSNFSKWDAFLGSSYMCRKEQTLQINEDVQVHTFNL
WIQPFLVEANKFATAEECIADSDLNFLIPIAVGVALGFLIILVFISYIIGRRKSRTGYQS
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgagcggcggcgctgagcggcgattggcggcgcgcgggcggccccgccctgcc
cctcacatgaccgctggcgaggtttttgtcgcgcccgctcgccgtcctccggtgtccncc
accgccggcagcggcagcagcaccaccgccatgggcccaagccgctccgccgcttcctcg
tgccgccgcttcctcctgccgctactgctgctcggcgtctccggttttttccagtcctat
gcagtggaagtagatataaaggatgcctctaatgctacttgcctgtatgcagattggatg
atgaggttcttgataacatatgaatcaaacaatggtgattataaaaccacaaccctgaat
ttgtcatcaagtgtgacacacaatggaagcgtctgtggcaatgacacacaagctgcactt
gtggcagtgcagtttggagaaggtcattcttggagcattaacatcacaaaaaacaatgaa
acttaccagggagacttcatcacactgacctacaacaccaatgacacagctgtatttcct
gatgctaaaagaaaaggaccagttactgttcttgtgaaggatcctttgcatccagttcaa
ctgaacactgtctttgtgtgtcataattcctactttattgaagcagaaaatataacgcag
attttctggaatgttactatgcaggcttttgttcagaatggcacagtcagtaaaaaagag
tctagatgtcctgctgatacacctacttctgcacctactgttccacctactattgccaac
gtaactactgcatttaccactactttggctcctgctccaacaactgctcccaaacccgtg
gagaatccagacacaggaaactattctcttaaaagtggaaataaaacttgtttcctggct
actgtggggctgcaactgaatgtttcccaagacaagcctctcctgatcaacatcaatcca
aagacaactgtcgcagatggtgcctgtggtaacacaacagctactctgaaactgaatgat
ggaaatagcacactgattggtttcacatttgctgttaaaaatacaagtgcaagtgtacaa
aagttttatctgagagaggtgaatgttacgctgcttagccgtctgaatggttctgtcatt
tcaagtgcagataacagcaatttcagcaagtgggatgctttccttggtagctcttacatg
tgccgaaaagagcaaactcttcagattaatgaagatgttcaagtacatacttttaatcta
tggattcagccattccttgtggaggcaaataagtttgctacagctgaagaatgcattgct
gattctgacctgaactttcttattcccatcgcagtgggtgtggcacttggattccttatc
attcttgtctttatatcttacatcattggaagaagaaaaagtcgtactggctatcagtct
gtataa
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