KEGG   Corvus cornix (hooded crow): 104694437
Entry
104694437         CDS       T03546                                 
Symbol
CUL4B
Name
(RefSeq) cullin-4B
  KO
K10609  cullin 4
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03420  Nucleotide excision repair
ccw04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    104694437 (CUL4B)
  09124 Replication and repair
   03420 Nucleotide excision repair
    104694437 (CUL4B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:ccw04121]
    104694437 (CUL4B)
   03400 DNA repair and recombination proteins [BR:ccw03400]
    104694437 (CUL4B)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccw04147]
    104694437 (CUL4B)
Ubiquitin system [BR:ccw04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Cullin
     104694437 (CUL4B)
DNA repair and recombination proteins [BR:ccw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cul4-DDB2 complex
      104694437 (CUL4B)
    TCR (transcription coupled repair) factors
     Cul4-CSA complex
      104694437 (CUL4B)
Exosome [BR:ccw04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   104694437 (CUL4B)
SSDB
Motif
Pfam: Cullin Cullin_Nedd8 SecA_SW
Other DBs
NCBI-GeneID: 104694437
NCBI-ProteinID: XP_010405981
LinkDB
Position
4A:complement(9709401..9735262)
AA seq 885 aa
MFPTGFSSPNPPAAAQEVRPATDGNTSSSSSCKKRKLNNNSNSEKEEFDSISSCTSSPSK
NTSSSSSSVITTSSCSSSGVASSNHHLQKKLRFEDSVDFIGLDVKMAEESSSSSSPAASS
QQQHQQQLKNKSLLISSVAVGHHANGLTKAASSTVSSFANSKPGSAKKLVIKNFKDKPKL
PENYTDETWQKLKEAVEAIQNSTSIKYNLEELYQAVENLCSYKISANLYKQLRQICEDHI
KAQIHQFREDSLDSVLFLKKIDKCWQDHCRQMIMIRSIFLFLDRTYVLQNSMLPSIWDMG
LELFRTHIISDQKVQNKTIDGILLLIERERNGEAIDRSLLRSLLSMLSDLQIYQDSFEHR
FLEETNRLYAAEGQRLMQEREVPEYLHHVNKRLEEEADRIITYLDQSTQKPLIATVEKQL
LGEHLTAILQKGLNHLLDENRIQDLSLLYQLFSRVRGGVQVLLQHWIEYIKAFGSTIVIN
PEKDKTMVQELLDFKDKVDHIIDVCFLKNEKFVNAMKEAFETFINKRPNKPAELIAKYVD
SKLRAGNKEATDEELEKMLDKIMIIFRFIYGKDVFEAFYKKDLAKRLLVGKSASVDAEKS
MLSKLKHECGAAFTSKLEGMFKDMELSKDIMIQFKQYMQNQNVPGNIELTVNILTMGYWP
TYVPMEVHLPPEMVKLQEIFKTFYLGKHSGRKLQWQSTLGHCVLKAEFKEGKKELQVSLF
QTLVLLMFNEGEEFSLEEIKQATGIEDGELRRTLQSLACGKARVLTKSPKGKDVEDGDKF
TCNDDFRHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQIDAAIVRIMKMRKTLSHNL
LVSEVYNQLKFPVKPADLKKRIESLIDRDYMERDKENPNQYNYIA
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgtttcccacaggtttctcttcccccaaccccccagctgcagcccaggaggtcagacct
gccactgatggtaacactagcagcagctcctcctgcaagaagagaaagttaaataacaac
agcaattccgaaaaagaagaatttgattccatttcctcctgcacctcttctccttccaaa
aacacctcctcgtcatcttcctctgtcatcaccacttcctcgtgctcctcctcaggggtc
gcttcctccaaccatcacctccagaagaagctgcgctttgaggactccgtggattttatt
ggactcgatgtgaagatggctgaagagtcttcttcctcctcctctcctgctgcctcttct
cagcagcagcaccaacaacagctcaaaaataaaagccttttaatttcgtcagtggctgtg
gggcaccatgcaaatggcctgaccaaagctgcctcctctactgtttccagtttcgccaac
agtaaacctggttctgccaagaaattagtgatcaagaactttaaagataaacccaaattg
cctgaaaactacacagatgaaacctggcaaaaactgaaagaagctgtagaagctatccag
aacagtacttcaattaagtacaatttagaagagctctatcaggctgttgaaaatctctgc
tcctacaagatctctgcaaatttgtacaaacaattgaggcagatctgtgaagaccacatt
aaagcacaaattcaccaattcagagaggattcattggatagtgtcctttttctaaagaaa
atagacaaatgttggcaagatcactgcagacaaatgattatgattagaagtatctttttg
ttcttggatcgaacttacgtacttcagaattcaatgctgccatctatttgggatatgggg
ctagaattgttcagaactcatataatcagtgatcagaaggttcagaacaaaactattgat
ggcattcttctgctgatcgagagggaaagaaatggtgaggctattgacaggagtttactg
cgaagccttctgagcatgctttctgacttgcagatttatcaggactctttcgaacataga
ttcttggaagagactaatcgcctgtatgcagcagagggacagaggcttatgcaggaacga
gaggttccagaatatcttcaccatgtcaacaagcgcttggaagaagaagcagacagaata
atcacttacttagatcagagcacacagaagccactaattgctactgtagaaaagcaactt
ctaggtgaacatttaacagccattcttcagaaaggtttaaatcaccttcttgatgaaaac
cgaattcaagacctgtctcttctatatcagttattcagccgtgtgagaggtggagtacag
gttctcttgcagcactggattgaatacataaaggcatttggtagcaccatagtgattaat
cctgaaaaagacaaaaccatggtccaagaacttcttgattttaaagacaaagttgaccat
attattgatgtttgctttctcaagaatgagaagtttgtaaatgccatgaaagaagccttt
gaaacattcattaacaaaagaccaaataagccagctgaactcatagctaaatatgtagat
tcaaagcttcgtgcaggcaacaaagaagctactgatgaagaacttgaaaaaatgctggat
aaaattatgatcatatttagattcatatatggaaaagatgtctttgaggccttttataaa
aaagatctagcaaagagactattagttgggaagagtgcatcagtagatgctgaaaaatct
atgctttccaaactcaaacatgaatgtggagctgctttcaccagcaaacttgaaggaatg
tttaaagatatggagctttcaaaagacataatgatacaattcaaacagtatatgcaaaat
cagaatgtccctggcaacattgaactaacagtgaatattctgactatgggttattggcca
acctacgtgcctatggaggtccacctgcccccagagatggtaaaactgcaggagattttc
aagaccttttatttaggaaagcacagtggtaggaaacttcagtggcagtcaacactagga
cactgtgtactaaaagcagaatttaaagagggcaaaaaagaacttcaggtctccttgttc
cagacactggtgctgctcatgtttaatgaaggagaggagttcagtttagaggagataaag
caagccactgggatagaggatggagagctgagaaggacacttcaatctctggcttgtggc
aaagctagagtactgactaaaagccccaaaggcaaagatgtggaagatggtgataaattc
acatgtaatgatgatttcagacataagctcttcaggataaaaatcaaccaaattcagatg
aaagaaacggtggaggagcaggcaagcactacagagagagtattccaggaccggcagtac
cagatcgacgctgccattgtgcggatcatgaagatgcgcaagacgctgagtcataacctg
cttgtgtcagaggtctacaaccagctgaagttcccagtcaagcctgctgaccttaagaag
agaatagaatccttaattgacagggactacatggaaagagataaagaaaacccgaatcag
tacaactatattgcataa

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