Corvus cornix (hooded crow): 104694478 Help Entry 104694478         CDS       T03546                                  Symbol THOC2 Name (RefSeq) THO complex subunit 2 isoform X1   KO K12879   THO complex subunit 2 Organism ccw  Corvus cornix (hooded crow) Pathway ccw03013   Nucleocytoplasmic transport ccw03040   Spliceosome Brite KEGG Orthology (KO) [BR:ccw00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     104694478 (THOC2)   09122 Translation    03013 Nucleocytoplasmic transport     104694478 (THOC2)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:ccw03019]     104694478 (THOC2)    03041 Spliceosome [BR:ccw03041]     104694478 (THOC2) Messenger RNA biogenesis [BR:ccw03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      104694478 (THOC2) Spliceosome [BR:ccw03041]  Complex C   Other components    EJC/TREX     104694478 (THOC2)  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     104694478 (THOC2) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  104694478 NCBI-ProteinID:  XP_039427727 LinkDB All DBs Position 4A:complement(10410490..10461008) Genome browser AA seq 1620 aa AA seqDB search MAALLPAEWIKNWEKGGKSEFVQLCRALSENKNHDVGFRDIQQALYELAYHVVRGNLKHD QASNVLGDVIEFREDMPSILADVFCILDIETSCLEEKNKRDHFTQLVLACLYLVSDTVLK ERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELGQDLS GNITSDLILENIKSLIGCFNLDPNRVLDIILEVYECRPEYDDFFVPLIESYMYMCEPQTL CHILGFKFKFYQDPSGETPSSLYRVAAVLLQHNLIDLEDLYVHLLPGDNTIIEEHKREIV EAKQIVRKLTMVVLSSEKTEEKEKEKEKEEEKTEKPPDNQKLGLLEALLKIGDWHHSQSI MDQMPPFYATSHKPIAIALCQLVHVTVEPLYRRVGVPKGAKGSPISSLPNKRAPKQAESF EELRKEVFNMLCYLGPHLSHDPILFAKVVRLGKAFMKEFQSDGSKQEDKEKMETLFSCLL SITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQYRYRLYGQWKNETYNSHPLLVKVKAQ TIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYILSQIQKYDNLITPVVDSLKYL TSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIELAGLLQYV ANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYFGQIRNTKK SSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQFGGFL ASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKAEKGNKQQH KVHKYITSCELVMAPVHEAVISLHLPKVWDDISPQFYATFWSLTMYDLAVPHSSYDREVN KLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQLEHVQRVLQRLKLEKDNWL LAKSTKNETITKFLQLCIFPRCIFSAIDAVYCAHFVELVHQQKTPNFSTLLCYDRVFSDI IYTVASCTENEASRYGRFLCCMLETVTRWHSDRVIYEKECGNYPGFLTILRATGFDGGNK ADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNLGQAL ERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKPFMIPENEFHHKDPPARNAVPATVQNG PGGAGMPTSLTINTVRLEEGTTEETDKLKEKSQGVVKVINKTVNATPKVTTSNGNSASNS KIIKEKDDKEKSGKEKDKEKKDKTPAATPEMKALGKDGKDKPKEERANKDEKAREIKEKT PKSDKDKEKVKKEEKASKEEKSKTVVTIIESKSTAEKEREKEPSRERDLAKEMKSKENAK GGEKVPVAGSLKSPVPRSETSESEREQKRRKVDTHSSPSHSSTVKGTAVLPKVPLVSENY SSSRVISVHFLQDNLNELKDSSAKHYVNHTTPTLSKSKEREVEKKDLDKSRERSREREKK DEKDRKDRKRDHSNSDREVPQDSTKRRKEENGTTGSSKHSKSESPSDSPRLNEKEKDKNK SKSSGKEKGDSIKAEKMEKSSSGSKKESRHDKEKAEKKEKRDSTGGKEEKKHHKSSDKHR NT seq 4863 nt NT seq  +upstreamnt  +downstreamnt atggcggcgctgctcccggccgagtggataaagaactgggagaaaggcggcaagagcgag tttgtgcagctgtgtcgtgctctcagtgaaaacaaaaaccatgatgtgggtttcagagat atccagcaggctttgtacgagcttgcttaccacgttgtcagaggaaacttaaagcatgat caagcttctaatgttcttggtgatgtcatagaattccgagaagacatgccttctatcctt gctgatgtattctgcatattagatattgaaacaagttgtttagaagaaaaaaataagagg gatcattttacacaactagtattggcctgtttgtatcttgtatctgacactgtcctaaag gagcgtttagatccagagacgctggagtcactgggacttatcaagcagtctcaacagttc aatcaaaaatctgttaaaataaagacaaaactattttataagcaacagaagtttaatttg ctaagagaggagaatgaaggttatgcaaagctcattgcggaactgggtcaagacttatct ggaaatatcactagtgatttaatccttgaaaatatcaaatctttaataggatgtttcaat cttgatcctaacagagttttggatattatcctagaagtctatgagtgcaggcctgagtat gatgatttcttcgtaccactgatagagtcttacatgtacatgtgtgaacctcaaactcta tgccatatccttgggttcaaattcaaattttatcaggatccaagtggtgagaccccttcc tccttatacagagttgctgctgtccttttgcaacataatctcatagatttggaagatctt tatgttcatcttctaccaggggataataccatcattgaggagcacaagcgagagatagtg gaagctaaacaaattgtcagaaaacttacaatggtcgtcttatcatctgaaaagactgag gaaaaggagaaagaaaaggaaaaagaggaggagaaaactgaaaagcctcctgataatcag aaacttggcttattggaagccttattaaaaattggtgattggcaccattcacaaagtatt atggatcagatgcctccgttctacgctacttcgcacaagccgattgcgatcgcgctttgc cagcttgtccacgtgacagttgagcctctgtaccgcagagttggtgtacctaaaggagct aaagggtcaccaatttcctctttgccaaacaagagagcaccaaaacaagcagagagcttt gaggaattgagaaaggaagtgttcaacatgctttgttaccttggtcctcatctgtcccat gatcccattttatttgcaaaagtagtacgtcttggaaaagcatttatgaaagagtttcag tctgatggaagcaaacaggaagataaagagaaaatggagacactgttcagctgtttgttg agtattactgatcaagtcttgcttccatctctttccttgatggactgcaatgcatgcatg tctgaggaattatggggaatgttcaaaacctttccataccagtaccggtaccgtctctat gggcaatggaagaatgaaacatacaatagtcacccacttcttgtgaaagttaaagctcaa accatagaccgagccaaatacatcatgaagcgtttaactaaggaaaatgtgaaaccctct ggaagacaaattgggaagctcagccacagcaatcctacaattttatttgattatatttta tcacaaatacaaaaatatgataacttgataactccggttgttgattcactgaaatacctc acttccctgaactacgatgtcttggcatattgtatcattgaggcattggcaaaccctgag aaggagagaatgaagcatgatgacactacaatctcaagctggctgcagagtctggcaagc ttttgtggtgctgttttccgaaaatacccaattgaacttgcaggcctcctgcagtatgta gccaaccagctgaaagctggcaagagctttgatttgcttattttaaaagaggtagtgcag aaaatggcggggatagaaattactgaagaaatgaccatggaacaattggaagccatgact ggtggagaacaactgaaagctgagggtggatactttggccaaatcaggaatacaaaaaag tcatctcagagattgaaagatgcgttattggaccatgatcttgccctcccactgtgcctg cttatggctcaacagagaaatggtgtcatctttcaggaaggaggggaaaaacatctgaag ctggtgggaaagctgtatgatcagtgccatgacaccctggtacaatttggtgggttttta gcatccaatctaagcacagaggattacattaagcgagtgccttctattgatgttctctgt aatgagtttcacacgcctcatgatgctgcattcttcctctcaagacccatgtatgcacac cacatttcatcaaagtatgatgaactgaaaaaagctgagaagggaaataaacagcagcac aaagttcacaaatacattacatcatgtgagctggtgatggctcctgttcacgaagctgtg atttctctgcacctccctaaagtttgggatgacatcagccctcagttttatgctacattc tggtctttaacaatgtatgaccttgctgtgccacacagcagctatgacagagaagtcaat aaacttaaagtccagatgaaagccatagatgacaatcaggaaatgcctccaaataaaaag aaaaaagaaaaagaacgttgcacagctctgcaggacaagctccttgaagaggagaagaag caattggagcatgtgcagagggttctacagagactgaaactagagaaagataactggctt ctggcaaaatctaccaaaaatgagactatcaccaaatttttacagttgtgtatatttcct cgatgcattttttcggcaattgatgcagtttactgtgctcactttgttgaactggtgcat caacaaaaaacacccaacttctctacacttctctgctatgaccgagtattctctgatatt atatatacagttgcaagttgcacggaaaatgaagccagtagatatggcaggtttttatgc tgtatgctggagaccgtgaccagatggcacagtgacagagtcatatatgaaaaggaatgt ggcaactatccaggcttcctaactatattacgagcaactgggtttgatggtggaaataag gctgatcaattggattatgagaattttagacacgtggtacacaaatggcactataaatta actaaggcttctgtgcactgcctggaaacaggtgaatatacacatatcagaaacatcctg atcgtgctgaccaaaatccttccatggtatccaaaagtgctgaacctgggtcaagccttg gaaagaagagtacacaagatatgtcaggaagagaaagagaagagacctgatctatatgca ttggcaatgggctattctggacagttgaaaagtaggaagcctttcatgatacctgaaaat gaatttcaccacaaagacccacctgccaggaatgctgtacctgcaacagtacaaaatggg ccaggtggtgctgggatgcctacgtctctcacaataaatacagttagactggaagagggc actactgaggagactgataagctaaaggagaagtctcagggtgtggtgaaagttattaat aaaactgtcaacgctacaccgaaggtgacaacaagcaatggaaacagtgcatctaatagc aaaattattaaagagaaagatgataaagagaaaagcgggaaggaaaaagataaagaaaaa aaagacaagactccagctgccactccggagatgaaggcacttgggaaagatgggaaagat aaaccgaaggaagaacgggcaaacaaagatgagaaagcaagagagatcaaggagaaaacg ccaaaatctgacaaagataaggaaaaagtgaagaaagaagaaaaagcttcaaaagaggaa aagtccaagacggttgttaccatcattgagtcaaagtcaactgcagaaaaggagagagaa aaggagccatccagagaaagagatctagcgaaggagatgaaatccaaggaaaatgctaaa ggaggagaaaaggtgccagtagctgggtccttgaagtcacctgttccccgatcagaaaca tcagaatctgaaagggaacaaaaacgccgcaaagttgatacacattcttctccgtcacat tcctcaacagtaaagggtacggccgtgcttcccaaagtccctctggtttctgaaaactat tccagctcacgtgtcatctccgttcattttctacaggacaacctcaacgaactcaaggac tcttcagcaaagcactacgtaaaccacactactccaacactgtccaagagtaaggagaga gaagtggagaagaaagatttggacaagtcaagggaaagatccagagagagagagaagaaa gatgaaaaggacaggaaagatcgaaaaagggatcattcaaacagtgaccgagaggtaccg caggattcaactaaacgacgcaaagaggaaaacggcacaactggttcttcaaaacacagc aaaagtgaaagtccttctgattcccctcgcttaaatgaaaaagagaaggataaaaacaaa tcaaaatcttcaggaaaagagaaaggtgattcaatcaaggcagaaaagatggagaagagc tcctccggtagcaaaaaggaatcaagacatgataaagaaaaagcagagaagaaagaaaaa cgggacagtactggggggaaagaagaaaagaaacatcataaatcttcagacaagcacaga taa

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