Corvus cornix (hooded crow): 104694585
Help
Entry
104694585 CDS
T03546
Symbol
BARD1
Name
(RefSeq) BRCA1-associated RING domain protein 1
KO
K10683
BRCA1-associated RING domain protein 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
104694585 (BARD1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104694585 (BARD1)
04121 Ubiquitin system [BR:
ccw04121
]
104694585 (BARD1)
03036 Chromosome and associated proteins [BR:
ccw03036
]
104694585 (BARD1)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104694585 (BARD1)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Negative regulators of mRNA 3' end processing
104694585 (BARD1)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
104694585 (BARD1)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Regulators of centriole replication
104694585 (BARD1)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-core complex
104694585 (BARD1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_6
Ank
Ank_4
Ank_2
Ank_5
Ank_3
BRCT_2
BRCT
zf-RING_5
zf-C3HC4_2
zf-C3HC4
ANK_LRRK2
zf-C3HC4_4
NIBRIN_BRCT_II
zf-RING_UBOX
PTCB-BRCT
Siva
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
104694585
NCBI-ProteinID:
XP_010406260
LinkDB
All DBs
Position
7:complement(36569262..36610024)
Genome browser
AA seq
791 aa
AA seq
DB search
MREALRGRSGNQPAPGSPLRPAAPSMAPPGHPWSHTRAALGRLERALSCSRCAGVLREPV
SLGQCEHVFCLSCMGDCVGTECPVCHVPAWVQDAQINRQLDNMIQLCSKLRQLLGADASD
SAEVTSTPTDSDLGKKSKKEQIKMWFSPRSRKIRCVVKRSQSETKSNDLGQDTSSVYDFF
PSPPQEKPSKPTKRPTQRQRKNMKKKHLADINKEWNLEKPEQKGVEEKIPKEKCVTICSQ
PVVLCTPEPESPEERPQQESVKEADSSNNTEDMEVLPQAESPKKKDSGEVVCSARDSKEK
YCAAETTLSKEKAVMPLKRGRQQSRLQGTPQSKRARRSERDVPGKSGRQANGLEESLQGS
PISPATEHQTPVQISSSASNLTDTGMKTRRSAALQVINSPSLSESPSTPSTSKTCSQVAT
PLSPFVLKSPGGNTIARRNYKGETLLHVASIKGDLAAVEELLKNGADPNVKDNAGWTPLH
EACNHGHREVVELLLQHRALVNTTGYQNDSPLHDAARNGHVAIVELLLLHGASQDAVNIF
GLRPVDYAESEKMKSVLMLPVKNESFSLNQPSEALSSSQPRNGPLGVLGSNLSAEQQKLL
NKLATVLKAQRCTEFNSRVTHLVIPDVPMPSTVKCMMAVLTGCWVLKFEWVQACLQSCVR
EQEEKYEVQGGPQRGRLNREQLLPKLFDGCYFYFLGSFKHHQKSDLLDLVKAAGGQVLVR
QPKPDSDVTQTINTVAYHAEPTSDQRLCTQYVIYDVASKFQPEKIRQGKVWMAPSSWLID
CVMSFQLLPVK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgagggaggcgctgcgcggacgctcgggcaaccagccggccccgggcagccccctacgc
cccgccgccccctccatggcgccgcccgggcacccctggtcccacacccgcgccgcgctg
gggcggctggagagggcgctgagctgctcccgctgcgccggcgtcctgcgggagcccgtg
tccctggggcagtgcgagcacgtcttctgcctatcctgcatgggtgactgtgttggcacc
gagtgccccgtgtgccacgtgccagcctgggtgcaggacgcacagatcaaccggcagctg
gataacatgatccagctctgcagcaagctgcggcagctcctgggcgccgacgcctcagat
tcagcagaagttacatccacaccgactgactcagacttgggaaaaaagagcaagaaggaa
cagataaaaatgtggtttagtccaagaagcaggaagattcgatgtgttgtgaagaggagt
cagtctgagactaaaagcaatgaccttggtcaagacacatcttcagtttatgatttcttt
ccttcccctcctcaagagaagccctccaagccgacaaaaagaccaacccagagacagagg
aagaacatgaaaaagaaacatctagcagacattaacaaagagtggaacttagagaaacct
gagcagaaaggagtcgaggagaagattcccaaggaaaagtgtgtgaccatctgcagtcag
ccagtagtgctgtgcactccagaaccagagagtcctgaagaaagacctcagcaggagtct
gtaaaggaagctgactccagcaacaatacagaagatatggaagttctaccacaggcagaa
tccccaaagaagaaagatagcggcgaggttgtgtgctctgcacgagatagcaaggaaaaa
tattgtgctgcagagacaacactctcaaaagaaaaagcagttatgcctttgaaacgtgga
aggcagcaatccagacttcagggtactcctcagtctaaaagagcaaggagaagtgagagg
gatgttcctgggaagtcaggcaggcaggccaatggcttagaggagtcactgcagggctcc
cccatctccccagcgacggaacaccagacaccagttcagatttcttcctctgcatccaat
ctcactgacactggaatgaagacaagaagatctgcagcccttcaagtgataaacagtcct
tcactttcagaatctccttctaccccatccacttccaagacttgcagccaagtagcaaca
ccactcagtccttttgtgttgaaatcccctggtggcaacacaattgccagaaggaattac
aagggagagactttgctccatgttgcttccatcaagggtgacttagcagctgtggaggag
ctgctgaaaaacggggcagatcccaacgtcaaagataatgctggctggacaccactgcac
gaggcgtgtaaccacgggcacagggaggtggtggagctgctgctgcagcaccgggcgctg
gtgaacaccacgggctaccagaacgactccccgctccacgacgctgccaggaacgggcac
gtggccatcgtggagctgctgctcctgcacggcgcctcccaggatgcagttaatatattt
ggtctgcggcctgtggactatgcagaaagtgaaaagatgaaatctgtgctaatgttacca
gtgaagaatgaatcattttcacttaaccagccctctgaggcactgagctccagccagcca
agaaatggacctcttggtgtactggggagcaatcttagtgcggagcagcagaaattgctg
aacaaattagcaacagtcctgaaggcccagaggtgcactgaatttaacagcagagtaact
catcttgttatccccgatgttccaatgccaagtactgtcaaatgcatgatggctgttctg
actggatgttgggtcctcaagtttgaatgggtacaagcctgtctgcagagctgtgttcga
gagcaagaagagaagtacgaagtccaaggtggcccccagcgagggcggctcaaccgggag
cagctgctgcctaagttgtttgatggatgctacttctattttttgggatctttcaaacat
caccagaagagtgatctgctggacctggtgaaagcagcaggaggccaggtcctggttagg
cagcccaaaccagacagtgatgtgacacagaccatcaacacagtggcctaccatgcagag
cccacctctgaccagaggctctgcacccaatatgtcatctatgacgtggcttccaagttc
cagccggagaagatccggcagggcaaggtgtggatggccccctccagctggctcatagac
tgtgtgatgtcatttcagctcctgcctgtgaagtga
DBGET
integrated database retrieval system
