KEGG   Corvus cornix (hooded crow): 104694587
Entry
104694587         CDS       T03546                                 
Symbol
FN1
Name
(RefSeq) LOW QUALITY PROTEIN: fibronectin
  KO
K05717  fibronectin 1
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04510  Focal adhesion
ccw04512  ECM-receptor interaction
ccw04518  Integrin signaling
ccw04810  Regulation of actin cytoskeleton
ccw04820  Cytoskeleton in muscle cells
ccw05100  Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    104694587 (FN1)
   04518 Integrin signaling
    104694587 (FN1)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    104694587 (FN1)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    104694587 (FN1)
   04810 Regulation of actin cytoskeleton
    104694587 (FN1)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05100 Bacterial invasion of epithelial cells
    104694587 (FN1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:ccw04131]
    104694587 (FN1)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:ccw04147]
    104694587 (FN1)
   00536 Glycosaminoglycan binding proteins [BR:ccw00536]
    104694587 (FN1)
   04990 Domain-containing proteins not elsewhere classified [BR:ccw04990]
    104694587 (FN1)
Membrane trafficking [BR:ccw04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   ER-Golgi intermediate compartment (ERGIC) proteins
    104694587 (FN1)
Exosome [BR:ccw04147]
 Exosomal proteins
  Exosomal proteins of bladder cancer cells
   104694587 (FN1)
Glycosaminoglycan binding proteins [BR:ccw00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   104694587 (FN1)
Domain-containing proteins not elsewhere classified [BR:ccw04990]
 Fibronectin (FN) domain-containing proteins
  Fibronectin type I domain-containing proteins
   104694587 (FN1)
SSDB
Motif
Pfam: fn3 fn1 FN3_DSCAM-DSCAML_C Fn3_PBP1 Pur_ac_phosph_N Fn3_Dep-1_3rd Fn3_VIN3 fn2 Fn3_Dep-1_2nd NDNF Fn3_ROS1 FN3_Tor_3rd fn3_2 Ig_RIMBP2
Other DBs
NCBI-GeneID: 104694587
NCBI-ProteinID: XP_039410629
LinkDB
Position
7
AA seq 2481 aa
MPGRAVWRLALLALCLGAAAVGGHRRGAGGKSRRQAQTQTTSLPQGTAAQGKQTCYDNGR
YYQINQQWERTYLGNTLVCTCYGGSRGFNCESKPEPEETCFDKYTGSTYRVGETYERPKD
SMIWDCTCIGAGRGRISCTIANRCHEGGQSYKIGDTWRRPHETGGYMLECVCLGNGKGEW
TCKPVAERCYDNTAGTSYVVGETWEKPYQGWMMVDCTCLGEGSGRITCTSRNRCNDHDTK
TSYRIGDNWSKKDNRGNLLQCVCTGNGRGEWKCERHTALHTTSTGSGSPSITNVQTALYQ
PQQPQPQPYGQCITDNGIVYSVGMQWLKTQGSQQMLCTCLGNGVSCQEIAVTQTYGGNSD
GEPCVLPFTYDGRTFYSCTTEGRTDGHFWCSTTSNFEQDRRYSFCTEQNVLVQTRGGNSN
GALCHFPFLYNNRNYTDCTSEGRRDNMKWCGTTENYDADQKFGFCPMAAHEEICTTNDGV
MYRVGDQWDKQHDMGHMMRCTCVGNGRGEWTCIAYSQLRDQCIVDGITYDVNQTFHKRHD
EGHMLNCTCFGQGRGRWKCDPVDQCQDSETRTFYQIGDSWEKYVHGVRYQCYCYGRGIGE
WHCQPLQTYPGSTGPVQVIITESTNQPNSHPIQWNAPERSHITQYILRWRPKNSGRQWKE
ATIPGHRNSYTISGLKPGVIYEGQLISVQQYGHKEVTRFDFTTTSTTAVTSNTVSGETTL
LPPVVATSESVTEITSNSFVVSWVSASDTVSGFRVEYELSEEGDEPQYLDLPSTATSVNI
PDLLPGRKYIVNVYQISEEGEQNLILSTSQTTAPDAPPEHTVESVDDTSIVISWSRPQAP
ITGYRIVYVPSVEGSSTELNLPDTATSVTLSDLMPGVQYNISIYAVEENQESTPVFIQQE
TTGVPRTDEVPSPRDLQFVEVSDIKITIMWTPPQSQVSGYRVEVIPVNRPGQHGQRLPIT
RSSFAEVIDLIPGTTYLFKIFAVNQGRESKPLTGEQTTKLDAPTNLRFLNTTEHSVLVLW
TRPRAVITGYKLTAGPTRGGQPRTYNVGPSATKYLLRNLQPGTEYTVYLVAVKGDLQSNR
ETGVFTTYQPAGSVPPFNTEVTETSIVITWTPAPRIGFKLGVRPSQGGEAPREVISDSGS
IVISGLTPGVEYTYSLTVLMDGQERESPIVRRVTTPLAPPTGLRLRSNPDTGILIVSWER
STSPGISGYRVTTAPTDGQQGSTLEEVVGADQTTCTFENLNPGVEYNVSVYSVKDNQESV
PISETITPEVPQLTDLSFLDITDSSIGLRWTPLNASTIIGYRITVVAAGESVPIFEDFVD
SSVGYYTVTGLEPGIDYDISVITLINGGESAPTTLTQQTAVPPPTDLRFTSVGPDTMRVT
WTAPTSIVLSGFLVRYSPAKKEEDVAEVTVSPSDRMVILTNLLPGTEYLVKVYSVSEQRE
SAPLYGIQKTGLDSPTGLDFSDITANSFTVHWIAPRATITGYRIRYQPEQGGARPKEERV
PPSRNSITLTNLLPGTEYVVSIIAINGREESLPLVGQQTTVSDVPRDLEVTPTSPTSLRI
SWDAPAVTVRYYRITYGETGGSSPVQEFTVPGTVSTATITGIKPGVEYTITVYAVTGRGD
SPASSKPVTVTYRTEIDTPSQLQVTDVQDNSISIRWLPSTSPVTGYRVTAVPKKGHVPTK
IKNVPADQTQVTIEGLQPTVEYTVSVFAQNQNGESQPLVDTAVTNIDRPKGLTFTEVDVD
SIKIAWESPQGQVTRYRVTYSSPEDGIHELLPAPGGEEDTAELHGLRPGSEYTISIVAIY
DDMESLPLTGTQSTAIPPPTNLKFTQVTPTSLTINWNAPNVRLTGYRVRVNPKEKTGPMK
EINLSPDSTSAVVSGLMVATKYEVSVYALKDSLTSRPAQGVVTTLENVSPPRRPRVTDVT
ETTITITWRTKTETITGFLVEAIPAGGQNPIQRTISPELRSYTITGLQPGTDYKIYLYTL
NENARSSPVVLDASTAIDAPSNLRFLTTTSNSLLATWQPPRAKITGYIIRYEKPGSPVKE
ILPRPRPGTTEATITGLEPGTEYIIYIIAVKNSQKSEPLVGRKRTDELPTLISRPHPNQP
DILDVPSIDEGTPYLTNNRYDNGNGIQLPGSSGHPQTVGHQGQQVFFEEHGYRRPGPTTA
TPLRPGSRRPLPSVDEAIEIPGYQVPIVVEPSYPHSRGPRRNDTTGQEALSQTTISWRPL
LESSEYIISCQPVSQDEDTLQFRVPGTSSSATLKGLTRGATYNIIVEALKDHRRQKVLEE
VVTVGNTVSEGLNQPADDTCFDTYTGSFYSIGEEWERLSETGFKLWCQCLGFGSGHFRCD
SSKWCHDNGVNYKIGEKWDRQGENGQMMSCTCLGNGKGEFKCEPHETTCYDDGKMYHVGE
QWQKEYFGAICSCTCYGGQQGWRCDNCRRPSVEVAPEGSAGHTYTQFTQRYHQATNTNVN
CPIECFMPLDVQADTQHPRGQ
NT seq 7446 nt   +upstreamnt  +downstreamnt
atgccgggccgcgccgtgtggcggctggcgctgctcgccctctgcctgggggccgcggcg
gtggggggacatcgccgcggagccggcggcaagagccggcggcaagcgcagacccaaacc
acctcgctcccgcagggcaccgccgcgcagggaaagcagacctgctatgacaatggacgg
tactatcagataaaccagcagtgggagcgtacttacctgggaaacactctagtctgtacc
tgctacggtgggagccgagggttcaactgcgagagcaagcccgaacctgaagagacctgc
tttgacaaatacactggatccacttacagggtaggggagacttacgagcgccccaaggac
tccatgatctgggactgtacttgcattggagctggacgtgggagaatcagctgcaccatt
gccaatcgctgccatgagggtggccagtcctacaagatcggcgatacatggcgccggccc
cacgaaacaggcgggtacatgctggagtgtgtgtgcctgggcaatggaaagggcgagtgg
acctgcaaacctgtggccgagcgatgctacgacaacacagctgggacatcctacgtggtg
ggagagacctgggagaagccctaccagggctggatgatggtggactgcacctgcctcggt
gagggcagcggccgcatcacctgcacctccagaaatcgctgcaatgaccacgacaccaag
acttcctacagaattggggacaactggagcaagaaggataaccgtgggaacttgctccag
tgcgtctgcaccgggaacggcagaggcgagtggaaatgcgagagacacacggccctgcac
accaccagcactggctctggctctcccagcatcaccaacgtgcagacggcgctgtaccag
ccgcagcagccccagccccagccctacggccagtgcatcacggacaacggcatcgtgtac
tccgtgggcatgcagtggctcaagacacagggcagccagcaaatgctgtgcacctgcctg
ggcaacggagtcagctgccaggagatagctgtgacccaaacgtatggtggcaattctgat
ggagaaccctgtgtcctgcccttcacctacgatggaaggactttctattcctgcaccacc
gaaggccgcacagatgggcacttctggtgcagcaccacttccaacttcgagcaggacagg
agatactccttctgtaccgagcagaatgttttggtccagacacgtggtggcaattccaat
ggtgctctgtgccacttccccttcctgtacaacaaccgcaactacaccgactgtacttct
gagggacggagggacaacatgaagtggtgtggaaccaccgagaactacgatgctgaccag
aagtttggattctgccccatggctgcccatgaagaaatctgcacaaccaatgatggtgtc
atgtaccgtgttggggaccagtgggataagcagcacgacatgggccacatgatgagatgt
acttgtgtaggaaatggccgtggagaatggacctgcattgcctattcacagctcagagac
cagtgcattgtggatggcatcacctatgatgtgaaccagaccttccacaagcgtcatgat
gaggggcacatgctgaactgcacctgctttggccagggccgggggagatggaagtgtgat
cctgttgaccagtgccaggactcggaaacccgcaccttctaccaaattggagactcctgg
gagaagtatgtccatggggtcagataccagtgctattgctatggccgtgggattggagaa
tggcactgccaacctctgcagacctacccaggatcaactgggcctgttcaggtgatcatc
acagagagcacgaatcagccaaactcccaccccatccagtggaatgctcctgaacggtct
cacatcacccagtacatcttgcgctggagaccgaaaaactctggaaggcagtggaaggaa
gccaccatccctggccaccggaactcctacaccatctcaggcctgaagcctggtgtgata
tatgaaggacagctcatcagtgtccagcagtatggccacaaagaagtcacccgctttgat
tttaccacaaccagcaccacagcagtgacaagcaacactgtttcaggagagacaactctt
cttcctcccgtggttgctacctcagaatctgtcactgaaatcacatccaacagctttgtt
gtctcctgggtttctgcttctgacaccgtttctggattccgtgttgagtatgagctgagc
gaggagggtgatgaaccacagtaccttgatcttccaagcacagccacttctgtcaacatc
cctgacttgcttcctggtcgcaagtatattgttaatgtctatcagatctctgaagaagga
gagcagaatctgatcctgtctacttcacagactacagctcctgatgcacctcccgagcac
acagtggaaagtgtggatgacacatccattgtcatcagctggagcagaccacaggctcca
atcacaggctacaggattgtctacgtaccctctgtggaaggcagcagcacagagctcaac
ctgcctgacactgccacctctgtaacactcagtgacctgatgccaggggttcagtacaac
atcagcatctatgcagtggaagaaaaccaggagagcactcctgtcttcatccagcaggaa
accactggggtcccacgcacagatgaagtgccttcccccagagatctgcagtttgtggag
gtttctgacatcaagatcaccatcatgtggaccccaccccagagccaagtgtccggctat
cgggtggaggtgatccctgtcaaccgccctggccagcacggccagagactgcccatcacc
aggagctcttttgctgaagtcattgacctgatcccaggaacaacctatctcttcaagatc
tttgctgtaaaccagggcagggagagcaaacctttgactggagagcaaaccaccaagctc
gatgcccccaccaacctgaggttcctcaacaccacggagcactcggtgctggtgctgtgg
acacggccccgtgctgtgatcacggggtacaagctgacagcagggcccaccaggggaggg
cagccccgcacctacaacgtgggaccctctgccaccaagtacctcctgaggaacctgcag
cctggcaccgagtacaccgtgtacctcgtggcggttaaaggcgacttgcaaagcaacagg
gagaccggagtcttcaccacttatcagcctgctggctctgttcctccttttaacacagaa
gtgactgagacctctattgtcatcacctggacacctgccccaaggattggtttcaagctg
ggagtgcgcccaagccagggcggagaggctcctcgggaggtgatctcggactccggcagc
atcgtgatctccgggctgacccctggcgtggagtacacctacagcctcacagtgctgatg
gatggccaggagagagagagccccatcgtcaggagagtcactacaccactggctccgcca
accggcctgcgcctgaggtccaatcctgacactggcatcctgatagtctcgtgggagaga
agcacatctccaggcatcagcgggtaccgcgtgaccacggctcccaccgacgggcagcag
ggctctaccctggaggaggtggtgggtgcagatcagaccacctgcacctttgagaacctc
aaccccggcgtggagtacaatgtcagtgtctactctgtcaaggacaaccaggagagtgtc
cccatctcggaaaccatcaccccagaggtgccccagctcactgacctaagctttcttgac
ataactgactcgagcatcggcctgaggtggaccccgttaaatgcctccaccattattggg
taccgcatcacagtagttgcggcaggagagagtgtccctatatttgaagattttgtggac
tcctcagtaggatactacacagtgacaggcttggagccgggcattgattacgacatcagt
gtaatcacactcattaatggcggagagagcgcccctaccactctgacacagcaaacggct
gtgcctcctcccaccgatctgcgcttcaccagtgtggggcctgacaccatgagggtgact
tggactgccccgacttccatcgtgctgagcggtttcctggtgcgctactcccctgccaag
aaggaggaggatgttgcagaggtgacagtctcaccctcagaccgcatggtcatcttaaca
aacctgctccctggtactgaatatctggtgaaagtctacagtgtttccgagcagcgcgag
agtgcgcctttgtatggaatccagaaaacaggtctcgattcccccaccggcctcgacttc
tcagatataaccgcaaactccttcaccgtgcactggattgctcctcgtgccaccatcacg
ggctacaggatccgctaccagccggagcagggcggggcccggcccaaggaggaacgtgtg
cctccctcaaggaactccatcaccctcaccaacctgctgccaggcaccgagtacgtggtc
agcatcatcgccatcaatggcagggaggagagcctgcccttggttggccagcaaacaaca
gtgtctgatgttccaagggacctggaagtcactcctaccagcccaaccagcctcaggatt
tcctgggatgctcctgcagtgacagtcagatactaccggatcacttatggtgaaacaggt
ggaagcagccctgtacaggagttcacagtgcctggcactgtgtctactgccaccattact
ggcatcaaacctggtgttgaatacaccatcactgtgtacgctgtaactggccgtggagac
agccctgccagcagcaagccagtcactgtcacctacagaacagaaatagacacaccatcc
cagctgcaagtcaccgatgtccaggacaacagtatcagcatcagatggctcccttcaaca
tccccagtcacagggtatcgagtgactgctgtccccaagaagggacacgtgcccacaaaa
attaaaaatgtccctgcagatcaaactcaagtcactattgaaggtctgcagcccacagtg
gagtacacggtcagtgtctttgctcagaatcagaacggagagagccagcccttggttgat
acagctgtcaccaacattgaccgccctaaaggactaacattcactgaggtggatgttgat
tccatcaaaattgcttgggaaagcccgcaggggcaagtcaccaggtacagggtgacctac
tcaagccctgaggatggaatccatgagctattgccggccccaggtggcgaagaagacact
gctgagctgcatggcctcaggccaggttctgagtacactatcagtatcgttgccatatac
gatgacatggagagcctgcccctcactgggacccagtccacagcaattccacctccaaca
aacctgaagtttactcaggtaactcccaccagtctcaccatcaactggaatgcaccaaat
gttcgcctcactggttacagagtcagagtgaaccccaaagaaaagactggtcctatgaaa
gaaatcaacctttctccagacagcacatctgcagtcgtgtctggcttgatggtagcaacc
aagtatgaagtgagtgtgtatgccctgaaggactccctgaccagcagacccgcccagggg
gtggtcaccacccttgaaaatgtgagtccccctcgcaggccccgggtgacagatgtcacg
gagacaaccatcaccattacctggagaaccaagactgagaccatcactggcttccttgtg
gaagccattcctgcgggtggccagaaccccattcagaggaccatcagccctgaactcagg
agttacactatcactggcttgcagcctggcactgactacaagatctacctgtacactctg
aatgagaatgcacgcagctccccagtggtactggatgcctccactgctatcgatgctcct
tctaacctgcgcttccttacaaccacaagcaactccctgctggccacctggcagcctccc
cgagccaaaatcactggctacatcatcagatatgagaaacctggctcaccagtcaaggag
atcctgcctcgcccccggcctggcaccaccgaggctaccattactggtttggaacctggc
actgaatacatcatctacatcattgctgtgaagaacagtcaaaagagtgaaccactggtt
ggcagaaaaaggacagatgagctccccacgctgattagcagaccacaccccaaccagccc
gacatcctggacgtgccttccattgatgaggggaccccttacctcacgaacaataggtat
gacaatggcaacggtatccaacttccaggctcctctgggcaccctcagacagtaggacac
caggggcagcaagtcttcttcgaggagcacgggtacaggcggcctggacccaccacagcc
actcccctcaggccgggatccaggcggccgctgcccagcgtggatgaagccatcgagatc
ccgggataccaggtgcccatcgtcgtggagccctcgtacccgcactcccgtgggccccgg
cgcaacgacaccacagggcaagaagccctttctcagaccaccatctcctggaggccgctg
ctggagagctctgagtacatcatctcctgccagcccgtcagccaggacgaggacactctg
cagttcagggttcctggcacttcctccagtgccacactcaagggccttacaagaggggcc
acctacaacatcatagtggaagccctgaaggatcaccggaggcagaaggtgctggaggag
gtggtcacagttggcaacactgtgtctgaaggactaaaccagccagctgacgacacctgc
tttgatacttacactggctccttctattccattggcgaggaatgggagcgcttatctgaa
actggctttaagctctggtgccagtgtttaggctttggcagtggccatttcagatgtgac
tcttctaagtggtgccatgacaatggagttaactacaagattggggagaagtgggacagg
caaggggagaatggccagatgatgagctgcacctgccttgggaatggaaaaggagaattc
aagtgtgaacctcatgagaccacgtgctatgatgatgggaagatgtaccacgttggggag
cagtggcagaaggagtactttggggccatctgctcctgcacttgttacggaggacagcag
ggctggcgctgtgacaactgccgcaggcccagcgtggaggtggcccccgaaggctctgct
ggccacacctacacacagttcacacagaggtaccaccaggccaccaacaccaacgtcaac
tgccccattgagtgtttcatgcccctagatgtacaggcagacacacaacatccacgggga
cagtaa

DBGET integrated database retrieval system