Corvus cornix (hooded crow): 104694604
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Entry
104694604 CDS
T03546
Name
(RefSeq) aryl hydrocarbon receptor-like isoform X1
KO
K09093
aryl hydrocarbon receptor
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104694604
Transcription factors [BR:
ccw03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
104694604
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
PAS
PAS_11
PAS_9
bHLH_HIF1A
Motif
Other DBs
NCBI-GeneID:
104694604
NCBI-ProteinID:
XP_039411431
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Position
7:38961805..38981130
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AA seq
952 aa
AA seq
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MYAGRRRRKPVPRVTRPGPAEGGGSNPSKRHRERLNRELERLAGLLPFPPDVVAGLDKLS
VLRLSAGFLRARSFFGVALKNPSAKEAQRDGDCAPGPAPGSAAVPEGELLLQALNGFVLV
VTAEGLIFYSSHTIQDYLGFHQTEVMHQSIFELIHTEDQPEFRRNLHWALDPPRAPEGEP
SPEVGKSLGSSAVIYKPDQLPPENSSFLERSFVCRFRCLLDNSSGFLALNLQGRLKFLHG
QNKRSADGSALPPQLALFAISTPLQPPSILQIQTKNMIFRTKHKLDFTPLACDPKGKIVL
GYTEAELRMCGTGYQFVHAADTLYCAENHVRMMRTGESGLTVFRLLTKENRWKWVQANAR
LVYKNGEPEYIVVTQRPLVDEEGGEHLRKRSMHLPFTFATGEALLYQSAHPLPGFPDPFQ
SKGKPGKCRKPSCSRGGRSQKNGADPRSLLGTVMRQDKAVYASHPALTPSPSLSSTSHLG
NVSLPGAGRNAWSMGTAPVSSRGNSLKEKLLDLQQEDPLLATLDSLSIKSDESCSNNELF
TALEGLGLNAEDLELLLLDEKMVMVNMDPDHPSLNNSLVSNQVLSYIPCPLVKEHEGGQQ
VCPLPGTSPSPQGGTAPCHTTNKDSRYCLAQRAGRPCTASGQPPVPLWDQPLSAVPGLLL
ELAEQEEPSSGSQWRPAGEKALLRFLQPAPSTPWDKAPSSAPGTPCLQGSPGAQQLQGGF
PAVQPLQGDAHQSFSLPSQRQARVALPSRSERCHLLVNGVCGHGPGSPPRPSPWQDYVSP
LLGSPAQPGSYGLSHDLMSQQQGCWGPRPSMPPQHFILKGSCGVGAAGTGDSWEEVAPYP
HFFPSSCQLIPEKQLSPFPSVPQHPFPSSAAGHFGSIGSPLDTLNSCGTRTSALSQEGRH
RPHSSCGLPSSPRGLPQEHPVLGGSLALPCQPQPRAEVLPDPPHASRGDFCL
NT seq
2859 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcggggcgcaggcggaggaagccggtgccgcgggtgacgcggccgggcccggcc
gaaggcggcggctccaacccgtccaagcggcaccgggagcggctgaaccgggagctggag
cggctggcggggctgctgcccttcccgcccgacgtggtggccgggctggacaagctctcg
gtgcttcgcctcagcgccggcttcctgcgcgccaggagcttcttcggagttgccctgaag
aatcctagtgccaaagaggcccagagggacggagactgtgcccccggaccagctccgggc
tcggcagcggtgcctgagggtgagctgctcctacaggcactcaatggcttcgtgctggtg
gtgacagcagaagggctgatattttactcctcgcatacaatccaggactatctgggattt
catcagacagaggtcatgcaccagagcatcttcgagctgatccacactgaggaccagccg
gaattcaggcgcaacctccactgggccctcgacccaccacgcgctcctgagggtgagcct
tctccagaagtggggaagagtcttggctcttctgctgtcatctacaagccggatcaactg
cccccagagaactcctccttcctggagaggagctttgtgtgccgctttcgctgcctcctg
gataattcctccggcttcctggctttaaaccttcaaggcaggctgaaattccttcatggg
cagaacaaaaggtctgcagatggctctgccctgcccccccagctcgctctgttcgccatc
tccacgcccctgcagcccccgtccatcctgcagatccaaaccaagaacatgatcttcagg
acgaagcacaagctggacttcacgcccttggcgtgtgatcccaaggggaagattgtcctg
ggctacaccgaggcggagctgcggatgtgtggcaccgggtaccagtttgtccacgctgct
gacacgctgtactgtgctgagaaccacgtcaggatgatgaggacgggggagagcggcctg
acggtgttccggctgctgaccaaggagaaccgctggaagtgggtgcaggccaatgcgcgg
ctcgtctacaagaacggcgaacccgagtacatcgtggtcacgcagagacccctcgtagat
gaagaaggaggagagcaccttcggaaacggtccatgcatcttccctttacctttgctacg
ggagaggcgctcctgtaccaaagcgcccaccctctcccgggcttccctgatcctttccag
agcaaagggaaacccggcaagtgcaggaagccctcctgcagccgtggagggcgctcccag
aagaacggcgctgaccccaggtctctgctgggcactgtgatgcggcaggacaaggcagtg
tacgcctcccacccggctctcactcccagcccttccctcagcagcacttcccacctcggg
aatgtgtccttgccaggtgcaggaaggaatgcctggagtatgggcactgctccagtttcc
tccagggggaacagcctcaaagagaagctgctggatttgcagcaggaagaccctctcttg
gccactctggactcgctctcaattaagagtgacgagagctgttccaacaacgagcttttc
actgctctggagggcctgggcttgaacgctgaggacctggagctcctgctgctggatgag
aaaatggtgatggtcaatatggacccagaccacccatccctgaacaacagcctggtcagc
aaccaggttctctcctacatcccctgccctctggtgaaggagcacgagggagggcagcag
gtctgtcccctgccaggcacgtcccccagcccacagggaggcactgccccatgccacacg
acgaacaaggactcgaggtactgcctggcacagcgtgcagggcggccctgcactgcctcg
ggccagccccctgtcccgctgtgggatcagcccctcagtgctgtgccagggctgcttctg
gagctggctgagcaggaagagccgtccagtggctcccagtggagaccagctggggagaag
gctctgctccgcttcctccagccagcgccgagcaccccatgggacaaggcccccagctca
gccccgggaaccccctgcctgcaggggtcgcccggggcccagcagctgcagggtggcttc
ccagccgtgcagcccctccaaggggatgcccaccagtccttctccctgcccagccagcgc
caggcccgcgtggcactgcccagccggtcagagcgctgtcacttgctggtgaacggggtg
tgtggccatggccccggctcccctccacgccccagcccgtggcaggactatgtctcccca
ctcctggggtctccagctcagcctggctcttacggcctcagccatgacttgatgtcccag
cagcagggctgttggggccccaggcccagtatgcccccacagcactttatcctgaaggga
tcctgcggcgtgggagctgcaggcactggggactcctgggaagaggtggctccatacccc
catttttttccctcttcctgccagcttattcccgaaaagcagctgagcccttttccctct
gtgccccagcaccctttccccagctcagctgcagggcactttgggagcatcggcagccct
ctggacactctgaattcctgtggaacacgcacctctgcactgagccaggagggcaggcac
aggccccacagcagctgtggtttgcccagctctcccaggggattgccccaagagcacccg
gtgctggggggaagcctggcactgccctgccagcctcagccccgggcagaagtgctgcca
gatccccctcacgcctccaggggagacttctgtctgtag
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