Corvus cornix (hooded crow): 104694899
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Entry
104694899 CDS
T03546
Symbol
RAB11FIP1
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104694899 (RAB11FIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ccw04131
]
104694899 (RAB11FIP1)
Membrane trafficking [BR:
ccw04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
104694899 (RAB11FIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
Motif
Other DBs
NCBI-GeneID:
104694899
NCBI-ProteinID:
XP_039420244
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All DBs
Position
22:688449..701449
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AA seq
1388 aa
AA seq
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MAAAGWAPTHARVTVLRARGLRAKAAAGGSDAYAVMALGRDKFRTSVAERCRGEPLWREE
ATFELPARPAALRLTVLHRALAGADKFLGRAEVDLAALRDDGDRRHTRWYKLRSKPGKKE
KERGEIEVDIQFMRSNMTASMFDLSMKDKPRSPFGKLKDKLKGKRSSGLSDTASAIVPST
THSPADSEDEAVEKEKKKSKFKALFSKPGLQKTSLSQSLSVLPTQQPVTPRVRLRPSDFQ
PQWDEEESETSPTSERSFENALEEKPAPSPLFKSRKPAFLDSRQLTQGTTNHTKKDGLSL
FSGLKSKSDPISKSSLCINGSHVYMEETTTKDKTPTSSPSPHNLRRKQLFASEENLSSRS
TKSPEEMGRTSPGQAFSGSTSLETFKSMTLPSYKLLSSEEHLDTSVPPSVEAVRETKKPD
HKKSALLSLVTGKKETLKPSDAEIIPDRTLQSEENTITEEKSEEEAKCPEPPADGGGGSP
SGDAHHGEDAVATKQLLSPREEERKPEKAAPAKTKAVKPRLGLSPEEEPKATLPTLAPDP
LPAFLSVHRISSANNPFISKVGQTVQVPDSKNITSSPASLAAPAFAAELWNDKNPFTPEW
DRASRALDPNSITRFPSSHHPAASVPKAPCPGPVSARGNNPFAADWGQGPEGSDTEASRG
LSGPPTPSVPSGCHFNDNNPFVSKRGGQPVPGSQAVAGSSPSCLPGGEDCSSAGRPGPGA
SGGSSDVALTRDVTAVPDPLGTLSDPPAGPPGLAPELHCDSPQLQPEDSLESSEPGNAKS
KSFVLGGWQGVTSGDAGLGGQEGGEQHSGSSGRLRTGSGAAGEGAGFGGELGAGGYPSTE
LSGDSTHPTWSRDGTAVEVTGVNTEPCTRGDKGFVSLSKSSDSLVPEADRAPSPESELRE
KQESCGGERWVECVPMVEPQATPLAGNESLSPVKPTQRACPVSPRDSGTGGAGSEILVPP
RPAPRLAALLRKCPPISQAELRGDVPASGDGVKSTPGLLLLGDEASAARGCLPQSGSLET
VTPPVTPRGNSSDRPLKQEGDDNLSVSLTNLKSAIPVPGDRGSRLANLPAIPEGGSDDEL
LGDCQEGYGVTAGGKGALQTGEQPRGLTPLHGEQRELSDSSAAALVIPAALGGGGAVPGA
CKPGSSAVLPAGVGAPRVCVQGADSGLGVTSHSRECSGHFEKQELERSAGVEERAECDFS
EPSASSSSLSSPCQPYSSSHSLLSDTPNRRAESPKKPAAEGFADKAGNSGKKKLLQARVS
PSETFPNQTPWGGETVSPKHRLHPVKPMNAMANKPQSKNLNVISTMNEKLLEMSVKKYDP
SDPAYAYAQLTHDELIQLVLKQKDTITRKDLQVRELEDYIDNLLVRVMEETPNILRVSMS
GNKKAGKM
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcgggctgggcgcccacccacgcgcgggtgacggtgctgcgggcgcggggg
ctccgcgccaaggcggcggcgggcggcagcgacgcgtacgcggtgatggcgctgggccgc
gacaagttccgcacgtcggtggccgagcggtgccggggggagccgctgtggcgggaggag
gccacgttcgagctgccggcgcgccccgccgcgctgcgcctcacggtgctgcaccgcgcc
ctggccggcgccgacaagttcctgggccgcgccgaggtggatctggcggcgctgcgggac
gacggcgaccggcggcacacgaggtggtacaagcttcgctccaaaccggggaagaaggaa
aaagagagaggggagatcgaggtggatatccagtttatgaggagcaacatgacagccagc
atgtttgatctgtccatgaaggacaagccccgctctccctttgggaagctcaaagacaag
ctcaagggcaagaggagcagcggcctctcggacacggcatcggcgatcgtccccagcaca
acccactcccccgctgacagcgaggatgaggccgtcgagaaggagaagaagaaatccaag
ttcaaagcgctgttctccaagcccggcctgcagaagacgtccctgtcgcagtcgctgtcg
gtgctgcccacgcagcagcctgtcaccccgagggttcggctgcggcccagcgacttccag
ccgcagtgggacgaggaggagtccgagacctctccgacctcagaacgatcctttgaaaat
gccctggaagagaagccagctccttctcctctgttcaaatctcgtaaaccagcgtttttg
gacagtaggcagctcacccaaggaaccactaaccacaccaaaaaggatgggctctctttg
ttcagtggccttaaatccaaaagcgatcccatctccaagtccagtctgtgcatcaatggc
agtcacgtttatatggaagagaccacgacaaaggacaagactccaacctcctccccctct
cctcacaacctcaggaggaagcagctctttgcctcagaggagaacctgtcctccaggtcc
actaaatcacctgaagagatgggaagaacctctcctggtcaggctttctctgggtccaca
tccttggagactttcaaatccatgactttgccatcatacaaactgctcagtagcgaggag
cacctggacaccagcgttccaccgagcgtcgaggctgttagagagaccaaaaaaccagac
cacaaaaagtctgccttgctctccctggtcactgggaagaaggaaacgctgaagcccagc
gatgctgagattattcccgacaggaccctgcagagtgaggaaaacacaattacagaggag
aagagtgaagaggaggccaaatgccccgaacccccagcagatgggggaggagggagcccg
tcaggagacgctcaccatggggaggacgccgtcgcaaccaagcagctgctcagccctcgt
gaggaggaacggaaacccgagaaagctgcgccagccaagaccaaagctgtgaaacccaga
ctgggcctgtctccagaggaggaacccaaagccacacttcctactcttgcacctgaccct
ctccctgcttttctctctgtgcaccgtatcagcagtgcaaataatccttttatttctaaa
gtggggcagacagtccaagtgccagactctaaaaacatcaccagttctcctgcctctctc
gctgctcctgcttttgctgcagagctttggaatgacaagaacccctttactcctgagtgg
gacagggcatccagagccctggatcccaacagcatcacccgtttcccttcatcccatcat
cctgcagcgtctgttcccaaagctccttgtcctgggccagtctctgctaggggcaataat
ccttttgctgctgactgggggcaaggtcccgagggctctgacacagaggcttcccggggt
ctctctggcccacccacaccttctgtcccctctggctgtcatttcaatgacaataatccc
ttcgtgtccaagcgtgggggacagccagtgccaggttcccaggctgtcgctggttcttcc
ccttcctgccttcctggtggtgaggactgttcctctgcaggacgccctggtcctggtgct
tcaggaggctcttcggatgtggctttaaccagggatgtcacagctgtgccagaccctctt
ggcaccttgtctgacccccctgctggcccccctgggctggctccagagctgcactgtgat
tctccccagcttcagcctgaggattctttggaaagcagtgagccaggcaatgcgaaatct
aagtcctttgtccttggtggatggcagggtgttacatcaggtgatgcaggtttgggtggg
caggaggggggagagcagcactcgggttccagtggaaggttacggacgggttcaggggca
gcaggagagggagcagggtttgggggtgagctgggagcagggggttacccatcgacagag
ctctctggtgacagcacacatcccacctggagcagggatggaacagctgtggaggtcact
ggtgtaaacacggagccctgcacgaggggtgacaaaggttttgtgtctctctccaagtcc
agtgacagcctcgtgccagaggctgaccgggcaccgtcccccgagagcgagctcagggag
aagcaggagagctgtggtggagagcgatgggtggaatgtgtgcccatggtagagccccag
gcaactccacttgctggaaatgagtcactttctccagtcaaaccaacccagagagcctgc
ccggtgtcccctcgggactcgggtacaggaggggctggcagcgagatccttgtcccacca
aggccagccccacggctcgctgcactgctgaggaaatgcccacccatttcccaggctgag
ctaaggggtgatgtccctgcttcaggtgatggtgtgaaatccacaccagggcttctgtta
ctgggtgatgaagcctcagctgctcgtgggtgcctccctcaaagtggctccttggagact
gtcacccctccagtgacacccagaggtaacagcagtgacaggcctttaaaacaggaaggt
gatgacaatttatctgtcagtctcacaaatctcaagtctgccattcctgttcccggagac
cggggctcgagactggccaatcttccagcgatcccagagggaggctctgatgacgagctg
ctgggggactgtcaggagggctatggagtcactgcaggtggtaaaggtgctttacagact
ggagagcagccccgaggtctgacgcctttgcacggagaacaaagagagctctctgatagc
tctgctgcagctctggtgatcccggctgctctgggaggaggaggagctgttcctggtgcc
tgtaagccagggagttcagccgtgctgcctgctggagtgggtgctcccagggtctgtgtc
cagggagctgactcaggcttaggtgtgacgtctcattccagggagtgcagtggtcatttt
gagaaacaagagctggaaaggagtgcaggtgttgaggagcgtgcagagtgtgacttctct
gagccttctgcttcctcttcctccctgtcaagtccttgccagccctactcttcctctcat
tcccttctctctgacaccccaaatcgtagagcagagtctccgaaaaagccagcagccgag
ggcttcgcagataaagcgggaaattcgggcaagaagaaacttctccaggcacgggtttca
ccctctgaaacgttccctaaccaaaccccatggggtggtgaaaccgtgtctcccaagcac
agactccatcccgtgaagccaatgaatgccatggcaaacaagcctcagagtaagaacctg
aatgtcatcagcaccatgaatgaaaagctgctggaaatgagtgtgaagaaatacgatccc
tcagaccctgcctatgcgtatgctcagctgacacacgatgagctgatccagctggtgctg
aaacagaaggataccattaccaggaaggacctccaagtgcgggagctcgaggactacatc
gacaacctgcttgtcagagtcatggaagaaaccccaaacatcctccgtgtttccatgtct
gggaacaaaaaggctgggaagatgtga
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