Corvus cornix (hooded crow): 104694902
Help
Entry
104694902 CDS
T03546
Symbol
LSM1
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104694902 (LSM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104694902 (LSM1)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104694902 (LSM1)
mRNA degradation factors
5'-3' decay
Lsm complex
104694902 (LSM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
104694902
NCBI-ProteinID:
XP_039420293
LinkDB
All DBs
Position
22:645258..646969
Genome browser
AA seq
133 aa
AA seq
DB search
MNYMPGTASLIQDIDKKHLVLLRDGRTLIGYLRSIDQFANLVLHQTVERIHVGKKYGDIP
RGIFVVRGENVVLLGEIDLEKESDTPLQQVSIEEILEEQRVEQQAKQESEKLKVQALKER
GLSVPRADTLDEY
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgaactacatgcccggcacggccagcctcatccaggacatcgacaagaagcacctggtg
ctgctgcgggacggccggacgctcatcgggtacctgcgcagcatcgaccagttcgcgaac
ttggtgttgcaccagactgtggagcgcatccacgtgggcaagaagtatggggacatccct
cggggcatcttcgtggtgaggggcgagaatgtggtgctgctgggggaaattgacctggag
aaggagagtgacacacctctgcagcaggtgtccatcgaggagatcctggaggagcagcgg
gtggagcagcaggccaagcaggagtcggagaagctgaaggtgcaggcgctgaaggagcgg
ggcctctccgtcccacgggcagacacgctggatgagtactga
DBGET
integrated database retrieval system
