KEGG   Corvus cornix (hooded crow): 104694925
Entry
104694925         CDS       T03546                                 
Name
(RefSeq) opsin-VA-like
  KO
K04256  c-opsin
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:ccw01009]
    104694925
  09183 Protein families: signaling and cellular processes
   04030 G protein-coupled receptors [BR:ccw04030]
    104694925
Protein phosphatases and associated proteins [BR:ccw01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     104694925
G protein-coupled receptors [BR:ccw04030]
 Rhodopsin family
  Vision
   Opsin
    104694925
SSDB
Motif
Pfam: 7tm_1 7TM_GPCR_Srw 7TM_GPCR_Srsx 7TM_GPCR_Srv 7tm_4
Other DBs
NCBI-GeneID: 104694925
NCBI-ProteinID: XP_010406713
LinkDB
Position
6:complement(179344..190118)
AA seq 395 aa
MILFLLSEVMDAFRAFENESLLSSYSVPARLDPFRRPLDSIQPWQFRLLAAVMLVVTSLS
LAENLAVILVTFKFKQLRQPVNYIIVNLSVADFLVSLIGGTISFLTNLKGYFYMGYWACV
LEGFAVTFFGIVALWSLALLAFERYIVICRPLRNMRLRGKQAALGIVFVWTFSFIWTIPP
TTGWSSYTTSKIGTTCEPNWYSGAYTDRTYIIAFFTTCFIVPLLVILVSYGKLVWKLKKV
SDAQGRLRTTRKPERQVTRMVVFMIIAFLICWMPYATFSILVTAYPSIELDPCLAAIPAF
FSKTATVYNPIIYVFMNKQFRQCLIQMFSCSAIGTVESNMNLTSERAVLTQDRRGSEMSP
MAVPSTISETKTGVEHRNRQSLALLKTSENKICPM
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgatattatttttgctgagtgaagtaatggatgcattcagagcatttgaaaatgagtcg
cttttgtcgagttactctgttcctgccagattggatcccttccgtcgtcccttggactcc
atccagccctggcaattcaggcttctggcagcagtaatgttggtggtgacctccctgtca
cttgctgagaacctggctgtaatcctggtaacttttaagttcaagcaattgagacaacct
gtcaattatattatagtcaatttgtctgtggctgatttcctggtctcactgattggtggt
accatcagctttttaacaaatctgaaaggttatttttatatgggatactgggcttgtgta
ctggaaggatttgctgtcacattttttggcattgtagctctctggtctcttgctctgttg
gcttttgagcgctacattgtgatctgccgcccgctgagaaatatgcgcttgagggggaag
caggcagctctaggtattgtctttgtgtggactttttccttcatttggaccattccacca
acaactggttggagcagttacacgaccagtaagattggaactacttgtgagcctaactgg
tactcaggagcctatactgaccgtacatacattattgcattcttcaccacctgttttata
gtacccttattggtgattttggtatcctatggaaaattggtgtggaagctaaaaaaggtg
tcagatgcacaaggcaggctgcgaactaccaggaaacctgaaagacaagtgactagaatg
gttgtttttatgatcattgcctttctaatctgctggatgccatacgctaccttttctatc
ctcgtcactgcatatccctccattgagctggatccttgtctggcagcaattccggctttc
ttttccaaaacagctaccgtttacaatccaattatttatgtctttatgaacaaacagttc
aggcagtgtctgattcaaatgttcagttgcagtgccataggaactgtggagtccaacatg
aacctgacttcagagagagcagtgctaacccaggacagaagaggcagcgagatgtccccc
atggcagttcctagcaccatttctgagacgaaaactggagttgaacacagaaatagacaa
tctttggctctgttgaaaacttcagaaaacaaaatttgtcccatgtag

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