Corvus cornix (hooded crow): 104695018
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Entry
104695018 CDS
T03546
Symbol
POLE
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03030
DNA replication
ccw03410
Base excision repair
ccw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104695018 (POLE)
03410 Base excision repair
104695018 (POLE)
03420 Nucleotide excision repair
104695018 (POLE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccw03032
]
104695018 (POLE)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104695018 (POLE)
Enzymes [BR:
ccw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104695018 (POLE)
DNA replication proteins [BR:
ccw03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
104695018 (POLE)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
104695018 (POLE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf_DPOE_2
zf-DPOE
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
APP_N
Motif
Other DBs
NCBI-GeneID:
104695018
NCBI-ProteinID:
XP_010406869
LinkDB
All DBs
Position
15:complement(10967510..10999200)
Genome browser
AA seq
2291 aa
AA seq
DB search
MGLRDGAEPETARRGRRPGGPWEPADGAGSGRDDAPALSALKRLERAQRTDRLDALFGFE
RPTEPGERTGWLINMHPTEVLDEDRRSVSAVDYYFIQEDGSRFKVALPYKPYFYIATQKG
CEREVSSFLSKKFQGKIAKLETVPKEDLDLPNHLVGLKRNYIKLSFNTVEDLVKVRKEIS
PAVRKNREQDQASDVYTAMLSSALSGGSLSTDEQGASRKIANQMDNIVDMREYDVPYHVR
LSIDLKIHVAHWYNVRYWGNTYPPEIIRRDDLVERPDPVVLAFDIETTKLPLKFPDADTD
QIMMISYMIDGQGYLITNREIVSEDIEDFEFTPKPEYEGPFCVFNEPDEAHLIQRWFEHV
QETKPTIIVTYNGDFFDWPFVEARAAAHGINMYQEIGFQKDSQGEYKASQCIHMDCLRWV
KRDSYLPVGSHNLKAAAKAKLGYDPVELDPEEMCRMATEEPQTLATYSVSDAVATYYMYM
KYVHPFIFALCTIIPMEPDEVLRKGSGTLCEALLMVQAYHANIIFPNKQEQEFNKLTEDG
HVLDSETYVGGHVEALESGVFRSDIPCRFKMNPAAFDFLVQHVEKTLQHAIEEEEGLPLN
QVTNFQEVCDEIKVKLNSLKDVPNRIECPLIYHLDVGAMYPNIILTNRLQPSAMVDEATC
AACDFNKPGANCQRRMTWQWRGEFMPASRSEYHRIQQQLESEKFPPLFADGPPRAFHELS
QEEQAKYEKKRLADYCRKAYKKIHVTKVEERVTTICQRENSFYVDTVRAFRDRRYEFKGL
HKVWKKKLSAAVEVGDASEVKRCKNMEILYDSLQLAHKCILNSFYGYVMRKGARWYSMEM
AGIVCFTGANIITQARELIEQIGRPLELDTDGIWCVLPNSFPENFVIKSTNIKKPKVTIS
YPGAMLNILVKEGFTNDQYQELQDPASLTYITRSENSIFFEVDGPYLAMILPASKEEGKK
LKKRYAVFNEDGSLAELKGFEVKRRGELQLVKIFQSSVFEAFLKGSTLEEVYASVAKVAD
YWLDVLYSKAANMPDSELFELISENRSMSRKLEDYGEQKSTSISTAKRLAEFLGDQMVKD
AGLSCRFIISKKPEGSPVTERAIPLAIFQAEPSVRKHYLRKWLKSPSLQDFNIRAILDWD
YYIERLGSTIQKIITIPAALQQVKNPVPRVRHPDWLHKKLLEKNDVYKQKKINELFVSEG
KRQVLACQPAEGTPNSQVGDIEDFGAVKIPQPLVPIANKRKRIPAAEESQQLSQDLELSQ
SWREILGPPPPLGTTKEERLVWLRFHQKKWELQARQRQERRKRRRLEDGGVVAGGGVVRD
ALSKGLSGYLRRTARSILDLPWQVVQIAETSQPGLFRLWAVIGSDLHCIKLSIPRVFYVN
QRVPKPEEGTAYRKVNRILPRSNLVYNLYEYSVPEDMYQEHINEINADLSAPDIEGVYET
QVPLLFRALIHLGCVCMVSRQLVRHLAGREAETFNIEHLEMRSLAQFTYLEPGSIRHIYL
YHSSQGSKALLGLFIPSQRKAAVFVLDKVRSNQMPNLTTLFSAERTALLEKVGKELLPPD
KHTFEVRAETDPKAIYRGVQRLLLGYKDERRGPTLVAVQSNWDLKRLASGIPIIEEFPLV
PIRLVDDISYSVLDWQRHAARRMIRHYLNLDTCLSQAFEMSRYYHIPIGNLPDDISTFGS
DLFFSRHLRHHNHLLWLSPTARPDLGGKEADDNRLVMEFDERASVEINNPGCYSTVCLEL
DIQSLAVNTVLQSHHVNDMEGGSSMSISFDVIQQASLEDMVTGNQAANIPASYDETALCS
STFRILKSMVVSWVKEITQYHNVYADNQVIHFYRWLRSPSSLLYDPALHRTLHNMMKKLF
LQLVAEFKRLGSSVVYANFNRIILCTKKRRIEDAISYMEYIINSIHSKEIFHSLTISFSR
CWEFLLWMDPANYGGIKGRVDSRIHYGETDTSKRQALEEDSEEEEEEVAREEGEPDVEEL
LENSWNIAQFLPQAASCQSYFLMIVSAYIVAVYHSMKEELRRNTPGSTPIKRRSTSQVSQ
EALGELGAMPGMITFSQDYVSNELTQSFFTITQKIQKKMAGSRNATEPSDMFPVLPGSYL
PLNNPALEFIKYVCKVLSLDANITNQVNKLRRDLLRLIEVGEFSEAAQFRDPCRSYVLPE
VICRNCNFCRDLDLCKDPALSQDGLVLPSWVCPSCQVQYDTDAIETALVEALQKKLMAFV
LQDLVCKKCHGVKETHMPVYCSCAGDFTLTISSQAFMDHVGVFQNIARHYGMAYLLETIE
WLLHTNLQLQR
NT seq
6876 nt
NT seq
+upstream
nt +downstream
nt
atggggctgcgggacggcgccgagcccgagacagcgcggcggggccggcggccaggcggg
ccctgggagccggcggacggcgcgggctccggccgtgacgatgctcccgcgctgtctgcg
ctcaagcgcctagagcgggcacagcgcacggaccggctggacgccctgttcggcttcgag
cggcccacggagcccggtgagcggacgggctggctcatcaacatgcacccgacggaagtg
ctggatgaggaccggcggtcggtgagcgcagtggactactacttcatccaggaggatggg
agccgcttcaaggtggccctaccctacaagccctacttctacatcgccacccagaagggc
tgtgagcgggaagtgtcctccttcctctccaagaagttccaagggaagattgcaaagctg
gaaactgtccccaaagaggacttggacctgccaaaccacttggtgggcctgaagaggaac
tacatcaagctgtccttcaacacagtggaggacttggtgaaggtgcggaaggagatctct
cctgctgtgaggaaaaacagggagcaggaccaggcgagtgacgtctacacagccatgctg
tcaagtgctctgagtgggggcagtctaagcacagatgagcaaggagcctccagaaaaatt
gccaaccagatggacaacattgtggatatgcgggagtatgatgtgccctaccatgttcgc
ctttccatcgacctgaagatccatgtggctcactggtacaacgtgcgatactggggcaac
acctaccccccggaaatcatccgccgagatgaccttgtggaacggccggatcctgttgtt
cttgcctttgatattgaaacaaccaaactccctttgaagtttcctgatgcagacacagac
cagatcatgatgatctcctacatgattgatgggcagggctacttgatcacaaacagggag
attgtctcagaggacattgaagactttgagtttactcccaagccagagtatgagggtcca
ttttgtgtcttcaatgaaccagatgaggctcatttaatccagagatggtttgaacatgtc
caggagaccaaacccaccatcattgtcacatacaacggagacttctttgactggcccttt
gtggaagcaagagcagcagctcatggaattaatatgtatcaggaaattgggtttcagaag
gatagccagggagagtacaaggcatcccagtgtatccacatggactgtctgaggtgggtg
aagagagacagttacctcccagtgggaagtcacaacctgaaagcagcagctaaagcaaaa
ctgggttacgatccagtggagctggaccctgaggagatgtgccggatggccacagaggag
cctcagaccctggccacctactcagtgtctgatgccgttgctacttactacatgtatatg
aagtatgtgcatcccttcatttttgccttgtgtaccatcattcccatggagcctgatgag
gtgttaagaaaaggatctggtacactgtgtgaggcactgctgatggttcaggcctaccat
gccaacatcatcttccccaataagcaggagcaggaattcaacaaacttacagaagatgga
catgtgctggactcggagacctacgtgggaggccacgtggaagcactggaatctggggtt
ttccgcagcgacattccctgccgcttcaaaatgaatcctgctgcctttgacttcctggtg
cagcacgtggagaagaccctgcagcacgccatcgaggaggaggagggtctgcccttgaat
caggtcaccaacttccaggaggtttgtgatgaaatcaaggtcaaactgaattccctgaag
gatgttcccaacagaattgagtgtcctcttatctatcatctggatgtgggggccatgtac
cccaacatcatcctgaccaacaggttgcagccctcggccatggtggatgaggccacatgt
gctgcctgtgatttcaacaagccgggtgccaactgccagcgccggatgacatggcagtgg
agaggagagttcatgcctgccagccgcagcgagtatcaccgtatccagcagcagctggag
tcagagaagttccctcccttgttcgctgatggaccaccccgtgccttccatgagctctcc
caggaagaacaagccaagtatgagaaaaagcgcctggcagattactgccgcaaggcatac
aagaagatccatgttaccaaggtggaggagcgagtcaccaccatctgccaacgagagaac
tctttctatgtggacacagtgcgagcattccgggaccgccgatatgagttcaaggggctg
cacaaggtgtggaagaagaagctatctgcagcagtggaggtgggagatgcctctgaagtg
aaacgctgcaagaacatggagatcctctatgactccctgcagctggcccacaagtgcatc
ctcaactccttctatggatatgtcatgcggaagggagctcgctggtactccatggaaatg
gctggcattgtctgcttcacaggggcaaatatcatcacccaggccagagagttgatcgag
cagattgggagacctctggaactggataccgatgggatttggtgtgtccttcccaacagc
ttcccagagaacttcgtcatcaagtcaaccaatatcaagaagccaaaagtgaccatctct
tacccaggtgccatgctgaacatcctggtgaaggaaggcttcacaaatgaccagtaccaa
gaactgcaggatccagcctcactcacatacatcacgcgctcagagaacagcatctttttt
gaagtggatggtccatacttggccatgatccttccagcctccaaagaggagggcaagaag
ctgaagaaaaggtacgctgtgttcaacgaggacgggtccctggctgagctgaaggggttt
gaggtgaaacgccggggagagctgcagctggtgaagatattccagtcgtctgtgttcgaa
gcctttctgaaaggcagcaccctggaggaggtctacgcttctgtggccaaggtggctgat
tactggctggatgtgctctacagcaaggctgccaacatgcccgattcagagctgtttgag
ctcatctcagagaaccggtccatgtcacgcaaactggaagactacggggagcagaagtcc
acctccatcagcactgccaagcgcctggcagagtttttgggggaccagatggtgaaggac
gcaggactgagctgtcgcttcatcatttccaagaaaccagaagggtctccagtcaccgag
agggccatcccccttgccatcttccaagccgagcccagcgtgcgcaaacactacctccga
aaatggctgaagagcccatcgctgcaggacttcaacatccgtgcaatcctggactgggac
tactacatcgagagactgggcagcaccatccagaaaatcatcaccattcctgcagccctg
cagcaggtgaagaacccagtgccacgggtccgacacccagactggcttcacaagaaactc
ctggagaagaatgatgtgtacaaacagaaaaaaatcaatgagctctttgtttcagaaggc
aagagacaggttcttgcctgccagcctgcagaggggacacccaactcacaggtgggtgac
atagaagactttggggctgtcaagatccctcagccactggttcccattgcaaataagcgg
aagcgcatccctgcagcagaggaaagccaacagctgtcccaggacctggagctgtcccag
tcctggcgggagatcctgggcccacctccaccccttggcaccaccaaggaagagcgtctg
gtctggctgcgcttccaccagaagaagtgggagctgcaggctcggcagcggcaggagcgg
cggaagaggcgacggctggaagatggtggggtggtggcaggtggaggagtggtccgggat
gccctctccaaagggctgagtggctatctgcgccggacagcgcgcagcattctggacttg
ccctggcaggtcgtgcagatcgccgagaccagccagcctgggctgttccggctgtgggca
gtgatagggagcgacctgcactgcatcaagctgagcatcccccgtgtcttctatgtcaac
cagcgtgtcccaaagcctgaggagggaacagcctacaggaaggtaaacaggatcctgcct
cgctcaaacttagtttacaacttgtacgaatactctgtccctgaagacatgtaccaagag
cacatcaacgaaatcaacgcagacctctctgctccggacattgagggagtgtatgagaca
caggtgccgctgctcttccgtgccctgatccacctgggctgcgtgtgcatggtcagcagg
cagctcgtccggcacctggcagggcgagaggctgaaaccttcaacatcgagcacctggag
atgcgctcgctggcccagttcacttacctagagccaggaagcattcgccacatctacctt
taccacagctcccagggcagcaaggcgctcctgggcctcttcatcccctcacagcgcaag
gctgccgtcttcgtgctggacaaggtacgcagcaaccagatgccaaacctcaccaccttg
ttctcagcagagcgcacagctctgctggaaaaggtgggcaaggagctcctgccaccggac
aaacacacctttgaggtgcgcgctgagaccgaccccaaggccatctacagaggtgtccag
cggctgctcttgggctacaaggacgagcgccggggccccacattggtggctgtgcagtcc
aactgggacctgaaacggctggcaagtgggatccccatcattgaggagttccccttggtc
cccatccggctggtagatgacatcagctactcggtcctggactggcagcgccatgctgcc
cgccgtatgatccgccactatctcaacctggacacctgcctctcccaggcttttgagatg
agcagatactaccacatccccattgggaacctccctgatgacatctccaccttcggctct
gacctgttcttctcacgccaccttcgtcatcacaaccacctgttgtggctgtcccccacg
gcccgccctgacctgggggggaaggaggctgatgacaaccgcctggtcatggagtttgat
gagagagcctcagttgagatcaacaatcctggctgctactccacagtgtgtctggagctg
gacatccagagcctggctgtgaacaccgtgttgcagtcccaccacgtgaacgacatggaa
ggaggctccagcatgagcattagcttcgatgtgattcagcaggcatccctggaggacatg
gtgacagggaaccaagctgccaacatcccagccagctatgatgagactgccctctgctcg
agcactttcaggatcctgaagagcatggtggtgagctgggtgaaggagataacgcagtac
cacaacgtctatgcagacaaccaggtcattcacttttaccgctggctccgctctccttcc
tccctgctctatgacccggcgctgcaccgcacactccacaacatgatgaagaagcttttc
ctgcagctggtggccgaattcaagcgcctgggctcctctgtggtctacgccaacttcaac
cgcatcatcctgtgcaccaagaagcggcgcattgaggatgccatcagctacatggaatac
atcatcaacagcatccactccaaggagatcttccactctctgaccatctccttctcccgc
tgctgggagttcctgctctggatggacccagcaaattatggaggtatcaagggaagagtg
gattctcgcatccactatggggagacggacaccagcaagaggcaggcattggaggaggac
agcgaggaagaggaggaggaggtagcgagggaggaaggggagccagatgtggaggagctg
ctggagaacagctggaacattgcgcagttcctgccccaggccgcctcctgccagagctac
ttcttgatgattgtatcagcctacattgtggctgtgtaccacagcatgaaggaggaactg
cggcgtaacacccctgggagcacccccatcaagaggaggagcaccagccaggtgtcccag
gaggctctgggggagctgggggccatgcctggcatgatcaccttctcacaagattatgtg
tccaatgagctcacccagagcttcttcaccatcacccagaagatccagaagaagatggct
ggttcccgcaatgccacagagccctcagacatgttcccagtcctgcctggctcctacctg
cccctcaacaacccagctctggagttcatcaaatacgtttgcaaggtcctctccctggat
gctaacataaccaaccaggtgaacaaactacgccgggacctgctgcgcctcattgaggtg
ggcgagttctcagaagcagcccagtttcgggacccttgccgctcctacgtgcttcctgaa
gtcatctgcaggaactgcaacttctgcagggacctggacctctgcaaggaccctgccctc
tcccaggatgggttggtgctgcccagctgggtctgccccagctgccaggtgcagtacgac
accgatgccatcgagacagcactggtggaagccctgcagaagaaacttatggccttcgtg
ctgcaggacctggtgtgcaagaagtgtcatggcgtgaaggagacgcacatgcccgtgtac
tgcagctgtgctggagacttcactctcaccatctcctcccaggcctttatggaccacgtc
ggcgtcttccagaacatcgcccggcactatggcatggcctacctgctggaaaccattgag
tggctgctgcacaccaacctccagctccagcggtga
DBGET
integrated database retrieval system
