Corvus cornix (hooded crow): 104695024
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Entry
104695024 CDS
T03546
Symbol
TRUB1
Name
(RefSeq) probable tRNA pseudouridine synthase 1 isoform X1
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccw03016
]
104695024 (TRUB1)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
104695024 (TRUB1)
Transfer RNA biogenesis [BR:
ccw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104695024 (TRUB1)
Prokaryotic type
104695024 (TRUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DMA
Motif
Other DBs
NCBI-GeneID:
104695024
NCBI-ProteinID:
XP_010406878
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All DBs
Position
6:complement(7666733..7698942)
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AA seq
287 aa
AA seq
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MAGEAGGAALGRAADRLFSLSGLFAVRKPKGPTSAAVLNLLKERLLAEAGVQTNGNKRNQ
VLKIGHGGTLDSAATGVLVVGIGKGTKMLGTMLTGSKKYTAIGMLGKATDTLDATGKVTE
EKPYDQVTKKDLENVLQKFTGDIMQVPPLYSALKKGGERLSTLMKRGEAVEAKPARPVRV
YSLSLQQFQPPLFTLGKDVECGGGFYVRSLVNDIGKELSTCATVQELTRTKQGPFTLEEH
ALHEDKWTIDEIARSLEHCTALLLGGPSRKKLKTEHPGETAVICEDK
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atggcgggggaggcgggcggcgccgcgctgggccgcgcggccgacaggctcttctcgctg
agcgggctcttcgctgtccgcaagcccaagggacccacctcggccgccgtgctcaacctg
ctcaaggagaggctgctggcagaagctggtgtgcaaacaaacgggaacaaaagaaatcag
gttttgaaaattggacatggaggaactttggacagtgcagccacaggagttctggtggtt
ggtattggaaaaggaacaaaaatgctgggaactatgttgacaggttccaagaaatacact
gccattggaatgctgggcaaggctactgatacattagatgctacaggaaaagtaactgaa
gaaaaaccttatgaccaggtaacaaaaaaagatcttgaaaatgtgctgcaaaagttcaca
ggggacatcatgcaagttcctccactctattctgctttgaagaagggtggagaaaggctt
tcaactctgatgaagagaggggaagcagtggaagcaaagccagctcggccagtaagagtg
tacagcctttctctccagcagttccagccaccactgttcacgctgggtaaagatgttgaa
tgtggtggtggcttttatgtcaggagcctggtcaatgacattggcaaagagctctctacc
tgtgccacagtgcaggagctgacccgcaccaagcaggggccgttcacgctggaggagcac
gccctgcacgaagacaaatggacaattgatgaaattgcccggtccttggagcactgcaca
gccctgctcctgggagggccatctcggaaaaaattgaagacagagcatcctggtgaaact
gctgtaatctgtgaggataagtga
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