KEGG   Corvus cornix (hooded crow): 104695029
Entry
104695029         CDS       T03546                                 
Symbol
SF3A1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    104695029 (SF3A1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ccw03041]
    104695029 (SF3A1)
Spliceosome [BR:ccw03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    104695029 (SF3A1)
 Complex B
    104695029 (SF3A1)
 Complex C
   U2 SnRNP specific factors
    104695029 (SF3A1)
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Ubiquitin_2 Rad60-SLD
Other DBs
NCBI-GeneID: 104695029
NCBI-ProteinID: XP_039417192
LinkDB
Position
15:12067534..12080765
AA seq 790 aa
MPAGPVQAVPPAQPAPPAESKPPEEEPKEEAAPAKPVVGIIYPPPEVRNIVDKTASFVAR
NGPEFEARIRQNEINNPKFNFLNPNDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQQQS
AQQQLPQKVQAQVIQETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLT
QLMQKEQRNYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLLKLKKEAENPKEVLDQV
YYRVEWAKFQERERKKEEEEKEKERVAYAQIDWHDFVVVETVDFQPNEQGNFPPPTTPEE
LGARILIQERYEKFGESEEVEMEVESDEEDEKQEKTDEPPAQLDQDTQVQDMDEGSDDED
EGQKVPPPPETPMPPPLPPTPDQVIVRKDYDPKASKPLPPAPAPDEYLVSPITGEKIPAS
KMQEHMRIGLLDPRWLEQRDRSIREKQSDDEVYAPGLDIESSLKQLAERRTDIFGVEETA
IGKKIGEEEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVPEDDSKE
KIGPSKPNEIPQPPPPSSASNPPASAQPITSVPRPPTMPPPVRAAVVSAVPVMPRPPMTS
VVRLPPGSVIATPMPPIIHTPRINVVPMPPSAPPIMSPRPPPMIVPTAFVPAPPVAPVPS
PAPMPPVHPPPPMEDEPVSKKLKSEDSLIPEEEFLRRNKGPVTVKVQVPNMQDKTEWKLN
GQVLVFTLPLSDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNMTSGSLIHL
ALKERGGRKK
NT seq 2373 nt   +upstreamnt  +downstreamnt
atgcccgccggacccgtgcaggctgtgcctccggcgcagcccgcgccccccgctgagagc
aaaccgccagaagaagagcctaaagaggaagcagcaccagccaagcctgtggtgggaatt
atttaccctcctccagaggtcaggaatattgtggacaagactgccagctttgtagccaga
aatggtccagaatttgaagccagaattcgtcagaacgaaataaataaccccaagttcaac
ttcttgaaccccaacgacccttaccatgcctactaccggcacaaggtcagcgagttcaag
gagggcaaagcccaggagccctcggctgccatccccaaggtcatgcagcagcagcagagt
gcccagcagcagctcccacagaaggtgcaggcccaggtgatccaggagacggtggtgcca
aaggagcctccgcccgagttcgagttcatcgcggaccctccatccatctcggccttcgac
ctggacgtggtgaagctcacggcgcagtttgtggcgcggaacgggaggcagttcctcacc
cagctcatgcagaaggagcagaggaactaccagtttgatttccttcgcccccagcacagc
ctcttcaactacttcaccaagctggtggagcagtacacaaagatcttgatcccgccgaag
ggcttgctcctcaagctcaagaaggaggctgaaaatcccaaggaagtcttggatcaggtc
tattacagagtggagtgggccaagttccaggagcgagagagaaagaaggaggaggaagag
aaggagaaggagcgtgttgcttatgcccagattgactggcatgactttgtggttgtggaa
acagttgacttccagcccaacgagcaagggaatttccctcctcccaccactccagaagag
ctgggagctcgaatcctgatccaggagcgttatgagaaatttggggaaagtgaggaggtg
gagatggaggtggaatcagatgaggaagatgaaaagcaagagaaaacagatgagcctcca
gcccagctggatcaggacacacaagtgcaggatatggatgaggggtcagatgatgaagat
gaaggtcagaaggttcctcctcctccagaaaccccgatgccacccccactccctcccaca
ccagatcaggtcattgtgcggaaagattacgatcccaaagcctcaaaaccgttaccaccc
gccccggctccagatgagtacctggtgtctcccatcactggagagaagattcctgccagt
aaaatgcaggaacacatgaggattgggctcctggatccacggtggctggagcagcgggat
cgatccatccgggagaagcagagtgatgacgaggtctatgccccaggtttggatattgag
agcagcctgaagcagctggcagagcgtcgtactgatatcttcggtgtggaagagactgcc
attggtaaaaagattggtgaagaggagatccagaaaccagaggaaaaggtgacctgggat
ggccactcgggcagcatggcccgcacacagcaggctgctcaggccaatatcactctgcaa
gagcaaattgaagccatccacaaggccaagggactggtgccagaggatgacagcaaggag
aagattgggcccagcaaacccaacgagataccccagccaccccctccttcctcagcctcc
aacccccctgccagcgcccagcccatcacatctgtacctcgtccacccaccatgcctcct
cccgtccgtgccgccgtggtttctgcagttccagtcatgcctcgtccccccatgacttcc
gtggtccggctgcctccggggtccgtcatagccacccccatgcctcccataatccacacc
ccacggatcaacgtggtgcccatgcccccctctgctccccccatcatgagcccccgcccg
ccccccatgatagtccccacagcctttgtccctgcgcctcccgtggctccggtcccgtcc
ccagcgccgatgcctcccgttcaccccccaccccccatggaggatgagccagtctccaag
aaactgaagagtgaggatagcctgattccagaggaggagtttctgcgtaggaacaagggc
ccagtcacggtcaaagtccaagttcccaacatgcaggacaagacagaatggaagctgaat
ggccaagtgctggtgttcaccctgcccctctcagaccaggtgtctgttatcaaggttaag
atccacgaggccacagggatgccagctgggaagcagaagctgcagtacgagggcatcttc
atcaaggattccaactccctggcttattacaacatgacgagtggctctctgattcacctg
gcactcaaagagagaggaggcaggaagaaatag

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