Corvus cornix (hooded crow): 104695141 Help Entry 104695141         CDS       T03546                                  Symbol ATG4C Name (RefSeq) cysteine protease ATG4C   KO K08342   cysteine protease ATG4 [EC:3.4.22.-] Organism ccw  Corvus cornix (hooded crow) Pathway ccw04136   Autophagy - other ccw04140   Autophagy - animal Brite KEGG Orthology (KO) [BR:ccw00001]  09140 Cellular Processes   09141 Transport and catabolism    04140 Autophagy - animal     104695141 (ATG4C)    04136 Autophagy - other     104695141 (ATG4C)  09180 Brite Hierarchies   09181 Protein families: metabolism    01002 Peptidases and inhibitors [BR:ccw01002]     104695141 (ATG4C)   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:ccw04131]     104695141 (ATG4C)    03029 Mitochondrial biogenesis [BR:ccw03029]     104695141 (ATG4C) Peptidases and inhibitors [BR:ccw01002]  Cysteine peptidases   Family C54: Aut2 peptidase family    104695141 (ATG4C) Membrane trafficking [BR:ccw04131]  Autophagy   Autophagosome formation proteins    Atg8 conjugation proteins     104695141 (ATG4C) Mitochondrial biogenesis [BR:ccw03029]  Mitochondrial quality control factors   Mitophagy factors    Autophagy-related proteins     104695141 (ATG4C) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Peptidase_C54 ATG4_LIR Motif Other DBs NCBI-GeneID:  104695141 NCBI-ProteinID:  XP_010407042 LinkDB All DBs Position 8:complement(2295691..2315820) Genome browser AA seq 459 aa AA seqDB search MEATGTDEVEKIKSKFMSAWHNMKYSWVLKTKTYFSRNSPVFLLGKCYHFKTEESGELST DGSNFDKINTEISGNVEEFRRDFISRIWLTYREEFPQIKGSALTTDCGWGCTLRTGQMLL AQGLMLHFLGRAWVWPDALDMDSSDLESWTSSTVRKLTASFEASLTAERDPKILPQPQRG PARRSWDVTEMRNEVYHRKIISWFGDSPVAAFGLHQLIEYGKKSGKIAGDWYGPAVVAHI LRKAVEEARDPELQGVTVYVAQDCTVYSSDVIDRQCSFMDSGKAGTKAVIILVPVRLGGE RTNTDYLEFVKGILSLEYCVGIIGGKPKQSYYFAGFQDDSLIYMDPHYCQSFVDVSIKDF PLESFHCPSPKKMSFKKMDPSCTIGFYCRTVQDFEKASEEITKMLKSSSKEKYPLFTFVK GHSRDYDFASSPLHEENDLFSEDEKKRLKRFSTEEFVLL NT seq 1380 nt NT seq  +upstreamnt  +downstreamnt atggaggccacagggacagatgaagtagaaaagatcaaatcaaagtttatgtctgcatgg cacaacatgaaatacagttgggtgttgaaaacaaaaacttacttcagtagaaactctcca gtctttctcctgggaaaatgttaccacttcaaaactgaggaatctggggagctctctaca gatgggtccaattttgataaaatcaacactgagatttcagggaacgttgaggagttccgc agagatttcatttctagaatctggctgacgtacagagaggaattccctcagatcaagggc tctgctttaaccacagactgtggctggggctgcacgctgagaacggggcagatgctgctg gctcagggcctgatgcttcatttccttgggagagcctgggtgtggccagatgcattggac atggacagctctgacttggagtcctggaccagcagcaccgtgaggaagctcacagcctcc ttcgaggcatcgctcacggccgagagggaccccaagatcctgccccagccccagcgcggc ccagcgaggaggagctgggatgtcaccgagatgaggaatgaagtttatcacaggaaaatc atctcctggtttggtgactccccagtggcagcctttgggctgcaccagctgatagaatac gggaagaagtccgggaagatcgcgggggattggtacgggcccgccgtggtcgcacacatc ttgagaaaagctgttgaagaagcaagggaccctgagctgcaaggagtaacagtctatgtt gctcaggattgtacagtctacagctcagatgttattgacagacagtgttcttttatggat tctgggaaagcaggcacaaaagctgtaattatattggttcctgtgagactcggtggagag agaacaaacacagactacttggagtttgtaaagggaattttaagcctggagtactgtgtt ggcattattggtggcaaacccaagcagtcctattactttgctggattccaagatgacagt ttgatttacatggatcctcattactgccaatcttttgtagatgtcagcataaaggatttc cctcttgagtcattccactgtccttctcccaaaaagatgtcattcaaaaaaatggatccg agctgcacaataggattttactgtaggactgtgcaggactttgagaaggcttctgaagaa atcaccaagatgctgaaatcttcatccaaggagaaatatcccctgtttacttttgtcaag ggtcattctagagactatgattttgcttccagtccactccatgaagaaaatgaccttttc tccgaggatgaaaagaaaagactaaagagatttagtacagaggagtttgtcttgctttga

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