Corvus cornix (hooded crow): 104695168
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Entry
104695168 CDS
T03546
Symbol
USP24
Name
(RefSeq) LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase 24
KO
K11840
ubiquitin carboxyl-terminal hydrolase 9/24 [EC:
3.4.19.12
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ccw01002
]
104695168 (USP24)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104695168 (USP24)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
104695168 (USP24)
Peptidases and inhibitors [BR:
ccw01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
104695168 (USP24)
Ubiquitin system [BR:
ccw04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
104695168 (USP24)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ARM_UBP24_USP9X-Y
UCH
UCH_1
UCH_UBL1
UBA
UBA_7
ubiquitin
Motif
Other DBs
NCBI-GeneID:
104695168
NCBI-ProteinID:
XP_039411772
LinkDB
All DBs
Position
8:4683291..4744945
Genome browser
AA seq
2613 aa
AA seq
DB search
MESEEEQHMTTLLCMGFSDAAAIRKALRLAKNDINEAVALLTNERPGLHYGGYEPMESGQ
GPPGGHGSPAGGQGSRGGDGDGGGXAGGGFDPPPAYHEVVETEKNDENGNCSGEGIEFPT
TNLYELESRVLTDHWSIPYKREESLGKCLIASTYLARLGLSDSDENCKRFMDRCMPEAFK
KLLTSSAVHKWGTEIHEGIYNMLMLLVDLVAERVKQDPIPVGLLGVLTMAFNPDNEYHFK
NRMKVCQRNWAEVFGEGNMHAVSPISTFQKEPHGWLVDLVNRFAELGGFSAIQSKLNSED
IELGAISALVQPFGVCAEYLNSSVVQPMLDPVIHKMIKYVQNVEEKDLKDKRLVSIPELL
SGIKLLCMRFQPDLVTAVDDLRLDILLRMLKSPHFSAKMNSLKEVTKLIEDSTVSKSVKN
AIDTDRLLNWLVENSVLSIALEGNIDQAQYCDRIKGIIELLGSKLSLDELTKIWRIQSGQ
SSTVIENIHTIIAAAAVKFSSDQLNHLFVLIQKSWETESDRVRQKLLSLIGRIGREARVE
TTTGKVLEVLWELAHLPTLPCSLIQQALEEHLTILSDAYAVKEAIKRSYIIKCIEDIKRK
MKPPRKVMSSSKNESSQHNNPQFVWVVPALRQLHEITRSFIKQTYQKQDKSIIQDLKKNF
EIVKLVTGSLISCHRLAASVAGPGGLVGATLVDGRYTYREYLEAHLKFLAFFLQEATLYL
GWNRAREIWECLVTGQDVCELDREMCFEWFTKGQHDLESDVQQQLFKEKILKLESYEITM
NGFSLFKTFFENVNLCDHRLKRQGTQLSVEKLELIGMDFIWKIAMESPDEEIANEAIQLI
INYSYINLTPRLKKDSVSLHKKFIADCYTRLEAASSALGGPTLTHAVTRATKMLTATAMP
TVATSVQSPYRSTKLVIIERLLLLAERYVITIEDLYSVPRTILPHGASFHGHLLTLNVTY
ESTKDTFTIEAHSNETVGSVRWKIAKMLNSPVDNIQIFANDSLLTVNKDQKLLHQLGFSD
EQILTVKTSGSGTPSGSSADSSTSSSNSSSVFSSSYAMEQEKSLPGVVMALVCNVFDMLY
QLANLEEPRITLRVRKLLLLIPTDPAIQEALDQLDSLGRKKTLLSESSSQSSKSPSLSSK
HQHQPSASSILESLFRSFAPGMSTFRVLYNLEVLSSKLMPTADDEMARNCAKSFCENFLR
AGGLSLVVNVMQRDSIPSEVDYETRQGVYSICLQLARFLLVGQTMPTLLDEDFIKDGVEA
LSSRPFRNVSRQASRQMSICGTPEKSSYRQLSVSDRSSIRVEEIIPAARVAIQTMEVNDF
TSTVACFMRLSWAAAAGRLDLVGSSQPIKESNSLIPAGIRNRLSSSGSNCSSGSEGEPTA
LHAGICVRQQSVSTKDALIAGEALSLLVTCLQLRSQQLGSFYNLPCVADFIIDILLGSPS
AEIRRVACDQLYTLSQTDTSAHPDVQKPNQFLLSVVLGAQLPLWSPTSIMRGINQRLLSQ
CTEYFDLRCQLLDDLTSSEMEQLKISPAAMLEDEITWLDNFEPNRTAECETSEADNILLA
GHLRLIKTLLSLCGAEKEMVGSSLIKPLLDDFLFRASRIILNSHSPAGSAAISQQDFHPK
CSTADSRLAAYEVLVMLADSSPSNLQLITKELLSMHHQCDPALTKEFDYLPPVDSRSISG
FVGLKNGGATCYMNAVFQQLYMQPGLPEALLSIDDDTDNPDDNVFYQVQSLFGHLMESKL
QYYVPENFWKIFKMWNKELYVREQQDAYEFFTSLIDQMDEYLKKIGRDQIFKNTFQGIFS
DQKICKDCPHRYEREEAFMALNLGVTSCQSLEISLDQFVRGEVLEGSNAYYCEKCKEKRT
TVKRTCIKVLPSLLVIHLMRFGFDWESGRSIKYDEQIRFPWMLNMEPYTVSGMARQDSSS
EVGENGRNTEQGGGGSPRKKVAPTENYELVGVIVHSGQAHAGHYYSFIKDRRGCGKGKWY
KFNDTVVEEFDLTDETLEYECFGGEYRPKVYDQSNPYPDVRRRYWNAYMLFYQRVSDQNS
PVLPKKSRVSVVRQEAEDLSLSAPSSPEISPQSSPRPHRPNSDRLSILTKLVRKGEKKGL
FVEKMPVRIYQMVRDENLKFMKNRDVYSSDYFSFVLSLASLNATKVKHPYYPCMAKVSLQ
LAVQFLFQTYLRTKKKLRADTEEWIATIDALLSKSIDACQWLVEYFVGPEGRELVKTFLL
ECSVREVRVAVATILEKTLDSALLYQEKLKTLHQLLEVLLALLDKDVPENCKNCAQYFLL
FNNFVQKQGIRASSLLLRHSALRHMINFLLGPNRQSNQNRRWSSAQAREFGYLHNTVALL
VLHSDVSSQRNVAPGLFKQRPPLSITASGLLLALHEEVEALLFLSEGKPYLMEVMHALRE
LTGSLSVLIEMVVYCCFCNEHFSFTVLHFIKTQLETAPPHELKNIFQLLHEILVIEDPLQ
VERIKFAFETENGLIALMHHSNHVDSSRCYQCVKFLVTLAQKCPTAKDYFKENSHHWSWA
VQWLQKKMSEHYWAPQSNVSNETSTAKTFQRTISAQDTLAYATALLNEKDQSGSSNGSES
SPANENGERHLQQGSESPMMIGEPKSDLDDVDP
NT seq
7842 nt
NT seq
+upstream
nt +downstream
nt
atggagagcgaggaggagcagcacatgaccacgctgctctgcatgggcttctcggacgcg
gccgccatccgcaaggccctgcgcctggccaagaacgacatcaacgaggccgtggcgctg
ctcaccaacgagcggcccggcctccactacggcggctacgagcccatggagagcgggcag
ggcccgccgggcgggcacggctcccccgccggcgggcagggctcccgcggcggcgacggg
gacggcggaggcnnggcgggaggcggcttcgacccgccgcccgcctaccacgaagtggtg
gagaccgagaaaaatgatgaaaatgggaattgctctggtgaagggattgagtttccaaca
accaacttgtatgaactggagagcagagttttgacagatcactggtccataccctacaag
cgggaggagtctctaggcaagtgcctaattgcatccacctacctggcaagactgggtctt
tctgattccgatgagaattgcaagaggtttatggacagatgcatgcctgaagcatttaaa
aagctgttgacatccagtgctgttcacaagtggggaaccgaaatccatgaaggaatctac
aacatgctcatgctgctggtggacctggttgcagaaagagtaaaacaagatcctattccc
gttggcctgcttggtgtgcttacaatggcgtttaatcccgacaatgaatatcatttcaag
aatcgaatgaaggtgtgccagagaaactgggcagaagtctttggggaagggaacatgcat
gctgtctcacccatatccacttttcagaaggaacctcacgggtggctggtggatctggta
aacaggtttgcagagttgggtggattttcagcaattcagtccaaactcaattcagaagat
attgaacttggggcaatctctgcattagttcaaccatttggagtttgtgcagaatatctt
aactcttctgtagtacagcccatgctggatccagtcattcataaaatgattaaatatgta
cagaacgtagaagagaaggacttgaaagacaagagactggtgagtatccctgagctcttg
tctgggatcaaactgctgtgtatgcgcttccaacctgacctggtcacggcggtcgatgac
ttgcggctggacattctgctgcgcatgttgaaatccccccacttcagtgcaaaaatgaat
tccctcaaagaagtaacgaaattaatagaagacagcactgtctccaagtcagtgaagaat
gccatagacacagaccgactgctgaactggctcgtggagaattcagtcctgtccattgct
ctggaaggtaatatagaccaagcacaatactgtgatcgtataaagggaattattgagctg
ctgggcagtaaattatccttagatgagctcactaaaatttggagaattcagtcgggacaa
tcctccactgtgattgagaacatacataccattattgctgcagctgctgtgaagtttagc
tctgatcagctcaatcatttatttgttctaatccaaaagagctgggagacagagagtgac
cgagtgaggcagaagctgctgagcctcatcggacgcatcggccgagaagcacgagtggaa
acaaccactggcaaggttctggaggtactttgggagctggctcatcttccaacgttaccg
tgtagtcttatccagcaggccttggaggaacacctgacaatcctcagtgatgcttatgca
gtgaaagaggcaatcaaaaggagctacatcatcaaatgcatagaggatattaagaggaaa
atgaagcctcccagaaaagtgatgagcagttctaaaaatgagtcgtcccagcacaataat
cctcagtttgtgtgggtggtgccagccttgcgtcagctccatgaaatcacacgttcattt
attaagcaaacttaccaaaaacaagacaagagcattattcaagatttaaagaagaacttt
gaaatagtgaagttggtgacaggaagcttgatatcttgtcaccgtttggctgcatctgtg
gcaggcccaggagggctggttggagcaacgctggtggatggccgatatacttaccgggag
tatttggaggcacatctaaaatttttggcattttttctgcaagaagccaccctttatttg
ggctggaatcgtgccagggagatctgggaatgccttgtaactggccaagacgtttgtgag
ttggatcgagagatgtgctttgagtggtttacaaaagggcagcatgatctggagagtgat
gtacagcaacagctcttcaaagagaaaattcttaaactggaatcatatgaaattactatg
aatggttttagtttatttaagactttctttgaaaatgtgaacctgtgtgaccatcgcctg
aagaggcaaggaactcagctgagcgtagaaaaactggaattaataggaatggatttcatt
tggaagattgcaatggagtcaccagatgaagaaattgccaatgaagctattcaactgata
ataaattacagctatattaatctaactcctagattgaaaaaggattcagtatcactgcac
aagaaattcattgctgactgctacacacgattagaggcagccagctctgcactcggcggt
ccaacactaacacacgccgttacaagagctacaaaaatgcttacagcaactgctatgcct
acagtggcaacatcagttcagtctccttacaggtcaactaaacttgtaataattgagaga
ctgctgctgttggcagagcgttacgtgataacaatagaggacctttactctgttccccga
actattctacctcatggtgcctctttccatggacatcttttaacccttaatgttacatat
gagtctaccaaagataccttcaccatagaggctcatagcaatgaaactgtaggaagtgtc
aggtggaagatagcaaagatgttgaattcacctgtggataacatacagatatttgccaat
gacagcctgctaacagtaaacaaagatcagaagctactccaccagctgggcttctctgat
gaacaaatccttacagtaaaaacatcgggaagtgggactccatcagggagctctgcagat
tcctcaaccagttccagcaacagcagcagtgtatttagttcctcgtatgcaatggaacag
gagaaatccctccctggagtagtcatggctctcgtgtgtaatgtgtttgatatgctttac
cagcttgccaacctggaggagccaaggataacactgcgagtgaggaaacttctgctcctg
attcccactgacccagctattcaggaggctcttgatcagcttgattccctgggaaggaag
aaaacactgctttcagaatccagttctcagtcctcaaaatccccatccttgtcttcaaaa
caccaacatcagcccagtgccagttcaatactagaaagtcttttcagatcttttgctcca
ggcatgtccaccttcagagtgctctacaatttggaggtgctgagctccaagctgatgcca
actgcagatgatgaaatggcaagaaactgtgccaagtccttctgtgaaaacttcctcaga
gcaggaggtttgagtttggtggtgaatgtgatgcagagagattccatcccatcagaggta
gactatgagacaagacaaggagtctattccatctgcctgcaacttgcaaggttcttgctg
gttggccagacaatgcccaccctgctggatgaggatttcattaaggatggggtggaagct
ctgtcctcacggcccttccgcaacgtgagccggcaggccagcaggcagatgtccatctgt
ggaactcctgagaagtcctcctaccgccagctctctgtgtctgacagatcctccatcagg
gtagaagaaatcatcccagctgcaagagttgccatacaaaccatggaggtgaacgatttc
acctccacagtggcttgtttcatgcgcctctcgtgggccgctgctgcgggacgcctggac
ctcgtgggaagtagtcagcccatcaaagagagcaacagtctcatccctgctgggattaga
aacagacttagcagctcaggaagtaactgcagttcaggaagcgaaggggagcccacggcg
ctgcacgctgggatctgcgtgaggcagcagtctgtgtccaccaaagatgctctcattgct
ggggaagccttgtctctcttagtaacctgccttcagctacgtagtcagcagctaggatct
ttttacaatttgccttgtgttgctgatttcatcattgatattctgcttggatcaccaagt
gctgagattcgtcgcgttgcctgcgaccagttgtacacccttagccagacagacacatca
gctcacccagatgtacaaaagccaaaccagttcctcctgagcgttgttcttggggcccag
ctgcctctttggtcaccaaccagcatcatgagaggaatcaaccagagacttttgtcccag
tgtacagaatattttgacctgagatgtcagttactggatgacctgacatcatcagaaatg
gagcagctgaagataagcccagctgccatgttagaagatgagatcacctggctcgacaat
ttcgagcccaaccgtacggcggagtgcgagaccagtgaggctgataacatcctcttagca
ggacacttgaggctcatcaagactctcctctcactttgtggggcagagaaggaaatggtt
ggttcatctttgattaagccattgttggatgatttcctgttccgagcctccaggattatc
ctgaatagccattccccagcaggcagtgctgcaatcagtcagcaagacttccatccaaag
tgcagtacagcagacagcagattagctgcttacgaagtgctggtaatgctggctgatagc
tcaccctccaatctccagctaattacaaaggagctgctttctatgcaccaccagtgtgac
cctgcactcaccaaggagtttgattatcttccaccagtggacagtcgctccatttctgga
tttgtgggactgaagaatggtggtgctacttgttacatgaatgctgttttccagcagctg
tatatgcagcctggtctcccagaggccttgctttccattgatgatgatacagacaatcct
gatgacaatgtgttctatcaagttcaatctctttttggtcatttgatggaaagcaagcta
cagtattatgtacctgagaacttttggaagattttcaagatgtggaataaggaactttat
gttagagagcaacaggatgcttatgagttcttcaccagtcttatagatcaaatggatgag
tacctcaagaaaataggaagagaccaaatatttaagaatacttttcaaggaatcttctcc
gatcagaagatctgcaaggactgtcctcacaggtatgagcgtgaggaagccttcatggct
ctcaaccttggtgtgacttcatgtcaaagcctggaaatatcactggatcagtttgttaga
ggagaggttctggaagggagcaatgcgtactactgtgaaaagtgcaaagaaaagagaact
acagtgaagcgcacctgcattaaggtcttaccaagcctgctggtgattcacctgatgaga
tttggctttgactgggagagcggccgttctattaaatatgatgaacaaataaggtttccc
tggatgctgaacatggaaccttacactgtgtcggggatggctcgtcaggactcgtcctca
gaagtgggggaaaatggcaggaacacagaacagggaggaggaggctccccaaggaagaaa
gttgctcctacggaaaactacgagctcgtcggtgtgattgtccacagcggccaggcacac
gcagggcactactactccttcatcaaggacaggagaggatgtggaaaaggaaagtggtat
aaatttaatgacactgttgttgaagaatttgatttgactgacgaaaccttggaatatgaa
tgttttggtggagagtatagacctaaagtctacgatcaatcaaacccctaccccgacgtg
cgccggcgctactggaatgcctacatgctgttctaccagagagtgtctgaccagaactct
cctgtcttaccaaagaaaagccgagtgagtgtcgtgcgtcaggaagctgaggacctctcc
ttatctgctccttcttcaccagaaatttcaccccagtcatcacctcgaccccacaggccc
aacagtgaccgtctttccatcttgactaagctggttcgaaaaggagaaaaaaagggactt
tttgtagagaaaatgcctgtgcggatatatcagatggtgagagatgaaaacttgaaattt
atgaaaaacagagatgtatacagtagcgactacttcagttttgttctgtcattagcatcc
ctgaatgctactaaggtaaagcatccctattatccctgcatggcaaaggtgagcttacag
ctggcagtccaattcctcttccaaacctatctccgaaccaagaagaaactcagggctgat
acagaagagtggattgccactatagatgcactgctctccaaaagcattgatgcttgtcag
tggttggttgagtatttcgttgggccagagggccgggagcttgtaaagactttcctcctg
gaatgcagcgtgagggaggtgcgagttgctgtggccactatccttgaaaaaaccctcgac
agtgccttgctttatcaggagaagttaaaaactttacaccagttactggaggtgctactt
gctctactggataaagatgtacctgaaaactgtaaaaactgtgctcagtactttttgctg
ttcaataactttgtacagaagcagggaataagggctagcagtcttctcctcagacactct
gccctgaggcacatgatcaactttctccttggccccaaccggcagagcaatcagaaccgc
aggtggagttcagcacaggcacgtgagtttggatatcttcacaacactgtagcactactt
gtcttgcactctgacgtctcctcacaaagaaatgttgctcctggtctctttaagcagcgt
ccacctctcagcatcaccgcttcaggactgcttctggcactccatgaagaagtggaagcc
ttgttattcctgtctgagggaaaaccctacttaatggaggtgatgcacgcgctgcgcgag
ctcacggggtcactgtcggtgctcatcgagatggtggtgtactgctgcttctgcaacgag
cacttctccttcactgtgctgcacttcatcaagactcaactggaaactgctccgcctcac
gaactgaaaaacatattccagttactccatgagatcctggttattgaagacccattacaa
gtagaacgcatcaaatttgcttttgaaactgaaaatggattaatagccttgatgcaccac
agcaaccacgtggacagcagtcgttgctaccagtgtgtcaagttccttgttactctggct
cagaagtgccctactgcaaaagattacttcaaggagaattcccaccactggagttgggct
gtgcagtggctacagaaaaagatgtctgaacattactgggctccccagagtaacgtgtcc
aatgaaacatccactgcaaaaaccttccagcgcactatttcagcacaggacaccctggcc
tatgccacagccctgctgaatgagaaggatcagtctggaagcagcaatgggtcagaaagc
agccctgccaacgagaatggagagaggcacctgcagcagggctcagagtctcccatgatg
attggggagcctaaaagtgaccttgatgatgttgacccttag
DBGET
integrated database retrieval system
