Corvus cornix (hooded crow): 104695180
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Entry
104695180 CDS
T03546
Symbol
NDC1
Name
(RefSeq) nucleoporin NDC1 isoform X1
KO
K14315
nucleoporin NDC1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104695180 (NDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104695180 (NDC1)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
104695180 (NDC1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
GP41
Motif
Other DBs
NCBI-GeneID:
104695180
NCBI-ProteinID:
XP_039412107
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Position
8:4981780..4996999
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AA seq
675 aa
AA seq
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MEAAAAAAGGQRALLRQVLGWRVAAAVTWSVLLLPICTAAFIVLSGLDLFHPVRWISNSF
NDLYTSYVIFCIFLMSVVIIVISIFNVEFYAVVPSIPCSRLALIGKIIHPHQVIHSFVHA
IMGMLVAWCATVMTKGRFQFLAVSCTPSESLEDAVPQMCLNEYHLFFLLSGAFLGYSYSL
FYLINNMNYLPFPIIQQYKYLRFRRSLPLLIKHSCVESLYFVRNFCVTYYFFGYIPKVWI
CTTMDLHTDSKLHPLDTLSGLLDLSLFYHTWLSGVFLLMTWYIAWLLFKIYATESHHFPI
QPTFAQETDQCLPKILNSNPPLLIKFLALQDLMLLSQYSPVRRQEVFSLSQPGGHPHNWT
AISRECLSLLSDLTQRLMAQQEAAAANGRAKPPVGELKVPPQTPGAVGIEDMAFQSQRSN
IVLRASMSPLVKPSLLPVKTSPGSDVGSPFSSPALSYKMGVVDVKSPWHGPVQSPHVMRR
GPKLWTSVPDQQMNGSHHESFPVVSAARTGSEAVQPRFIYTWLQNKQEQMKNFLSKRALI
MYFFSKHPEASIQAVFSDAQMHIWALEGLSHLVAASFTEDQFGVVQTTLPAILNTLLTLQ
EVVDRHFKLPHVSSKPPRISGSLVDTSYKTLRFALRASLKTALYRITTVFGEHLNAVQVA
TEHKKRLQQFLEYKE
NT seq
2028 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcagcagcggcggcgggcgggcagcgggcgctgctccggcaggttctgggc
tggcgagtggccgccgccgtcacctggtccgtgctgctgctgcccatctgcaccgcggcc
ttcatcgtcctcagcggcctcgacctgttccacccggtgcgctggatctcgaattctttc
aatgacttgtatacttcctatgtcatcttttgtatcttcctgatgtctgtggtgataata
gtaataagcatcttcaatgttgaattttatgcagttgtgccatcgataccatgctctcga
ttagcactgataggaaaaattattcaccctcatcaagtcatccattcctttgttcatgct
atcatgggaatgctggttgcttggtgtgctacagtcatgacaaaaggcaggttccagttt
cttgctgtgtcctgcacaccttcagaaagcctagaagatgctgttcctcagatgtgccta
aacgagtatcacctcttctttctactttctggagctttcttgggatacagttacagtctt
ttctatcttattaacaacatgaattatttgccatttccaatcatacagcaatacaagtat
ttacgtttcagaaggtctttgcctctcctgataaaacacagttgtgtggaatcgttatat
tttgttagaaacttctgtgtcacatattacttttttggttatatcccaaaggtatggata
tgtaccacgatggatctccatacagacagtaaattacatcctcttgacactctgagtggc
ttactggatctctccttgttttaccatacctggctgagtggtgtgtttctcctgatgacc
tggtacattgcttggctgctcttcaaaatctatgccacagagagtcatcattttcccatt
caaccaacatttgctcaggagacagaccagtgcctgcctaaaatcttaaacagcaatcct
cccctccttataaagtttttagccttacaagacttgatgttactttcccagtattctcct
gttcgacgacaggaagtctttagccttagccagccaggtgggcacccacacaactggact
gcaatatcccgggagtgtttgagtctcctgagtgaccttacccagaggctgatggcacag
caggaagcagcagcagcaaatgggagagcaaagccaccagtgggagagctgaaggtacct
ccacagactccaggagctgttgggatagaagacatggcattccagtcacagaggtccaac
attgttctcagagcctccatgtctccactggttaagccatccctgctgcctgtgaagaca
tctcctggctctgatgttggttcacctttcagctcccctgctttaagttacaagatggga
gttgtggatgtaaagtccccttggcacggaccagttcaaagtccccatgtcatgagaaga
ggaccaaagctgtggacatcagttccagatcagcaaatgaatggttcccatcatgaatcc
ttcccagtggtctctgctgcaagaactggcagtgaggcagtgcagccaagatttatttac
acgtggcttcagaacaagcaagaacagatgaaaaacttcttgtccaaacgggcactgata
atgtatttcttcagcaagcacccagaggcctccatccaggctgttttctctgacgcccaa
atgcacatctgggctttggaaggtctgtctcacttggtagcagcctcctttactgaagac
caatttggagttgtccaaactacactgccagctatcctgaacacgttactgactcttcag
gaggttgtagacagacatttcaaactaccacatgtttctagcaaacctccccggatttca
gggagtctggtggacacatcctacaaaacactacgatttgcacttagagcatctctgaaa
acagccttataccggataactactgtctttggagaacacttgaatgctgtacaagtggct
acagaacacaagaaaagacttcagcaattcctggagtacaaagaataa
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