Corvus cornix (hooded crow): 104695195
Help
Entry
104695195 CDS
T03546
Symbol
PRPF38A
Name
(RefSeq) pre-mRNA-splicing factor 38A
KO
K12849
pre-mRNA-splicing factor 38A
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
104695195 (PRPF38A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104695195 (PRPF38A)
Spliceosome [BR:
ccw03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
104695195 (PRPF38A)
Complex C
U4/U6.U5 tri-SnRNP related factors
104695195 (PRPF38A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
104695195
NCBI-ProteinID:
XP_010407132
LinkDB
All DBs
Position
8:complement(5768545..5772270)
Genome browser
AA seq
312 aa
AA seq
DB search
MANRTVKDAHSIHGTNPQYLVEKIIRTRIYESKYWKEECFGLTAELVVDKAMELKYVGGV
YGGNIKPTPFLCLTLKMLQIQPEKDIIVEFIKNEDFKYVRMLGALYMRLTGTAIDCYKYL
EPLYNDYRKIKSQNRNGEFELMHVDEFIDELLHEERVCDIILPRLQKRYVLEEAEQLEPR
VSALEEDMDDVESSEEEEEEDEKLERIPSPDHRRRGYRDLDKPRRSPVVRYRRSRSRSPR
RRSRSPKRRSPSPRRERHRSKSPRRHRSRSRERRHRSRSKSPGHHRSHRHRSHSKSPERS
KKSHKKSRRGNE
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggccaaccgcacggtgaaggacgcgcacagcatccacggcaccaacccgcagtacctg
gtggagaagatcatccgcacgcgcatctacgagtccaagtactggaaggaggagtgtttc
gggctcacggccgagctggtggtggacaaggccatggagctgaagtacgtggggggcgtc
tatggagggaacattaaacccacgcccttcttgtgcctgacgctgaagatgcttcagatc
cagcccgagaaggacatcatcgtggagttcataaaaaacgaggacttcaagtatgtccga
atgcttggagcactgtacatgagactgacaggcactgccatcgattgctacaagtacctg
gagccactgtacaatgactatcggaaaattaaaagtcagaacagaaatggggaattcgag
ctgatgcatgtggatgaatttattgatgagctactccatgaggaacgtgtttgcgacatc
atcctgcctcgactgcagaaacggtatgttctggaagaagctgagcaactcgagcctcgt
gttagtgctctggaagaagatatggatgatgtagaatctagtgaggaggaggaagaagaa
gatgaaaagctggaacggatcccatctcctgaccaccgcagaaggggctacagggacctg
gacaaaccccgcagatcgccggtggtgcggtacaggcggagccggagcaggtctccaagg
aggcgcagccgctctccaaagagaagaagcccatcaccgcgccgggagaggcatcgcagc
aaaagcccgagacggcaccggagcagatcccgggagaggcgccacagatcgagatctaaa
tctccagggcatcaccgtagtcacagacaccgaagtcattccaaatcacctgaaagatct
aagaaaagtcacaaaaagagtcggcgagggaatgaataa
DBGET
integrated database retrieval system
