KEGG   Corvus cornix (hooded crow): 104695250
Entry
104695250         CDS       T03546                                 
Symbol
PTCH2
Name
(RefSeq) LOW QUALITY PROTEIN: protein patched homolog 2
  KO
K11101  patched 2
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    104695250 (PTCH2)
SSDB
Motif
Pfam: Sterol-sensing TRA2_N Patched MMPL
Other DBs
NCBI-GeneID: 104695250
NCBI-ProteinID: XP_039412041
LinkDB
Position
8:9796778..9818353
AA seq 1431 aa
MGAAAAAAANGSGGGGAAPAPPAPXLPFRGAAGGRRRTHSPPSAPAPAPARPRRAHGGRR
RARPHITGVPSPASRPAMPAEPPRAAPPPLRAARRKPLPEGRAVGQRTPLWLRARFQALL
FALGCRIQRHCGKVLFVGLLVFGALAVGLRVASIETDIEHLWVEAGSRVSQELRYTKEKL
GEESVYTSQMLIQTPKKDGDNILTQEALQLHLEAALAASKVQVSLYGKSWDLNKICYKSG
VPIIENGMIERMIEKLFPCVILTPLDCFWEGSKLQGGSAYLPGRPDIQWSNLDPLQLMEE
LGQFTSLEGFKELLDKAEVGQAYMERPCLDPQDPQCPPSAPNKQSQQSPDIPAELSGGCH
GFSRKFMRWQQELILGGTTKDSQGKLLRAEALQTMFLLMSPRQLYEHFKDDYEIHDISWS
EEKAGAILEAWQRKFVELAQDSIPPNATQSVHAFSTTTLNDIMKSFSDVSVIRVAGGYLL
MLAYACVTMLRWDCSKSQGAVGLAGVLLVALSVASGLGLCSLLGISFNAATTQVLPFLAL
GIGVDDMFLLAHAFTETSQHIPFKERTGECLKRTGTSVTLTSVSNMIAFFMAALVPIPAL
RAFSLQAAVVVVFNFAMVLFVFPAILSLDLHRREKRRLDILCCFYSPCSSRVIQIQPQEL
ADANDNHACHPSPYGHPGMATSTQITTTVQAFTRCDPSGHHIVTVLPPTSQVCTSPAVLL
PHTDPLGSQVFAPSSSTRDLLSQLDEAKGGRECVPLPFCRWSLADFAREKYAPLLLRTRT
KAVVVVLFLALLGLSLYGTTMVHDGLYLTDIVPRDTKAHAFISAQFKYFSFYNMFIVTKG
GFHYPGAQAALLSLHQAFSTVKYVVREGNRDLPKMWLHYFQDWLRGLQATFDRDWQAGRI
THDSYRNGSEDGALAYKLLIQTGNKKEPFNFNQLTTRRLVDENGIIPPDTFYICLTVWAS
NDPLGFAASQANFYPPPPEWIHDKYDTTGENLRIPAAQPLEFAQFPFYLSGLRRTSDFVE
AIESVRAICREAAQRHGVLSYPSGYPFLFWEQYIGLRHWFLLAISILLACTFFVCALLLL
NPWTAGIIVSILAMMAVELFGIMGLMGIKLSAIPVVILIASVGIGVEFTVHVALGFLTAA
GSRNVRSAAALEHTFAPVMDGAVSTLLGVLMLAGSEFDFIMRYFFAVLTILTLLGLLNGL
VLLPVLLSVIGPPPEASLVDNGPCLPPPESVPPCLGPGAMYVRRAPAWPATFPEASDTEH
YTESVGPGSPRGPFIVPPAPAHILLEAGKDPSFPRITVLKPYKDSLEVQGKKEASGPQPA
APLPFGEPCTTLPREHPQPGPPGTRPAPPAALPTYSTHLQGPAGSYTTVTATASVTVALH
PTLPGSYPNFSPEGFTSSERDCLDEPSTSGTAVPDTFEMQNMGHHGAGARR
NT seq 4296 nt   +upstreamnt  +downstreamnt
atgggcgctgccgcggcggcggcggccaatgggagcggcggcggcggcgcggccccggcg
ccccccgcccccngcctcccctttagaggcgcggcgggcggccggcggcgcacacacagc
cctccatccgcaccggcaccggcaccggcacggccccgccgcgcgcatgggggccgccgc
cgcgctcggccccacataacgggggtgcccagccccgccagccgccccgccatgccggcc
gagcccccccgcgccgcgccgccgccgctccgcgccgcccgccgcaagccgctgcccgag
ggcagggccgtgggccagaggaccccgctgtggttgcgggcccgctttcaggcgctgctc
ttcgccctgggttgccggatccagcggcactgcgggaaggtgctcttcgtggggctgctg
gtgttcggggcgctggccgtggggctacgggtggcctccatcgagaccgacatcgagcac
ctctgggtggaagcgggcagccgtgtgagccaggagctgcgctacaccaaggagaagttg
ggcgaggagtccgtctacacctcccagatgttgatccagaccccgaagaaggatggggat
aacatcctgacgcaggaggccctgcagctccacctcgaggcggccctggctgccagcaag
gttcaagtctcactgtacggaaaatcgtgggatttgaacaagatctgctacaagtcgggt
gtccccatcattgagaacggcatgatcgagaggatgatagagaagctgttcccctgtgtg
atcctgacaccactggactgcttctgggaaggctccaagctgcagggaggctcagcctat
ctcccgggccgcccagacatccagtggagcaacctggaccctctgcagctgatggaggag
ctggggcagttcacatccttggaaggcttcaaagagctgctagacaaggcagaggtggga
caggcttacatggagcggccctgcctggacccccaggacccccagtgtccccccagtgcc
cccaacaagcagagccagcagagccccgacatcccagctgaactctcggggggctgccac
ggcttctccaggaagttcatgcgctggcagcaggagctgattttaggcggcacaaccaaa
gactcccaggggaagctgctacgcgccgaggccctgcagaccatgttcctcctcatgagc
ccccggcagctctatgagcacttcaaggatgactacgagatccatgacatcagctggagc
gaggagaaggcgggagccatcctggaggcctggcagaggaaatttgtggagctggcacag
gactccatccctcccaacgccacacagagcgtccacgctttctccaccaccacgctcaac
gacatcatgaagtccttctctgacgtcagcgtcatccgggtggctgggggctacctcctc
atgctggcctacgcctgtgtcaccatgctgcggtgggactgctccaagtcccaaggggct
gtgggcctggctggggtcctgcttgtggctctctccgttgcctctggcctggggctttgc
tcactgctgggcatctccttcaatgcagccaccacccaggtcctgcccttcctggccctc
ggcattggggtggatgacatgttcctcttggctcacgcctttactgagacgagccagcac
atccccttcaaggagcggacgggcgagtgtctgaagcgcacggggaccagtgtgactctc
acctctgtcagcaacatgatcgccttcttcatggcagccctggtgcctatccctgccctg
cgcgccttctctctccaggctgcagtggttgtggtgttcaacttcgccatggtgctcttt
gttttccctgctatcctgagcctggacctgcaccgccgggagaaacgcaggcttgacatc
ctctgctgcttctacagcccttgctcctcacgggtcatccagatccagccccaagagctt
gctgacgccaacgacaaccatgcttgccacccgtctccttatgggcaccctggcatggcc
accagcacccagatcaccaccactgtgcaagccttcacccggtgtgacccctcaggccac
cacattgtcaccgtcctgccacccacctcccaggtgtgcacctcacctgctgtcctcctg
ccgcacactgaccccttgggctcgcaggtcttcgccccatccagctccacccgggatctg
ctgtcccagctggatgaggccaagggcgggcgggagtgtgtccccctgcccttctgtcgc
tggagcctcgctgactttgcccgggagaagtacgccccgctcctcctgcgcacccggacc
aaggcggtagtggtggtgctgttcctggcactgctgggactgagcctctacggcaccacc
atggtgcatgatggcctctacctgacggacatcgtgccacgggacaccaaggcacacgct
ttcatctcggcccagttcaagtacttctccttctacaacatgttcattgtcactaagggt
ggcttccattacccgggtgcccaggctgccctgctgagtctgcaccaggccttcagcact
gtcaagtacgtggtgcgggagggcaaccgcgacctgcccaaaatgtggctccattacttc
caggactggctacgagggctccaggctaccttcgacagggactggcaggccgggcgcatc
acccatgacagctaccgcaacggctccgaggatggggcactggcctacaagctcctcatc
cagactggcaacaagaaggagcccttcaacttcaatcagctgaccacgcggcggctggtg
gacgagaatggcatcatcccccctgacaccttctacatctgcctgacagtgtgggccagc
aacgaccccctgggctttgccgcctcccaggccaacttctaccccccaccccctgagtgg
attcatgacaagtacgacaccacgggcgagaatctgcgaatcccagcagcccagccgctg
gagttcgcccagttccctttctacctgagcgggctgcgtcgcacatctgactttgtggag
gcaattgagagcgtacgggccatctgccgagaggctgcccagcgccacggcgtgctgagc
taccccagtggctaccccttcctcttctgggagcagtacattggcctgcggcactggttc
ctgctggccatcagcatcctgctggcctgcaccttctttgtctgcgccctgctgctgctc
aacccctggaccgccggcatcatcgtctccatcctggccatgatggctgtggaattgttt
ggcatcatggggctgatgggcatcaagctgagcgccatccccgtggtcatcctcatcgcc
tcggtgggcattggtgtggagtttacagtccacgtggccctgggattcctgacagctgcg
gggagcaggaacgtgcgctcagccgcagcactggagcacacttttgcccctgtgatggat
ggtgctgtctccaccctcctgggtgtcctcatgctggctggttctgagtttgacttcatc
atgaggtatttctttgcggtgctgaccatcctgacgctgctggggctgctcaatgggctg
gtgcttctgcccgtcctgctctctgtcatcgggccaccccctgaggcatccctggtggat
aatggcccctgcctacccccaccggagtcggtacccccatgcctgggccctggggcaatg
tatgtccggcgcgctccagcctggcccgccaccttccctgaggcctcggacacagagcac
tacacggagagcgtggggccaggcagcccacggggacccttcatcgtgccccctgccccg
gcacacatcctactggaggctggcaaggaccccagcttcccccgcatcaccgtgctgaag
ccctacaaggacagcctggaggttcaggggaagaaagaggcttctggccctcagcctgca
gcccccctgcccttcggggagccgtgcaccacactgccccgagagcacccgcagcccggc
ccgccaggcacccggccagccccccccgcagccctgcccacctacagcacccacctgcag
ggtcctgccggcagctacaccaccgtcacggccactgcatcggtgacggtggccctacac
cccacactgcctggctcctaccccaacttcagccctgagggcttcaccagcagtgagcgg
gactgcctggacgagcccagcaccagtggcactgctgtgcctgacacctttgagatgcag
aacatgggacaccacggggcaggtgcccggcgctag

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