Corvus cornix (hooded crow): 104695285
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Entry
104695285 CDS
T03546
Symbol
FUBP1
Name
(RefSeq) LOW QUALITY PROTEIN: far upstream element-binding protein 1
KO
K13210
far upstream element-binding protein
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ccw03019
]
104695285 (FUBP1)
03041 Spliceosome [BR:
ccw03041
]
104695285 (FUBP1)
Messenger RNA biogenesis [BR:
ccw03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
104695285 (FUBP1)
Spliceosome [BR:
ccw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104695285 (FUBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
FUBP_C
KH_Vigilin
KH_KhpA-B
Secretin_N
Motif
Other DBs
NCBI-GeneID:
104695285
NCBI-ProteinID:
XP_039412236
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All DBs
Position
8:complement(11978767..12012960)
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AA seq
682 aa
AA seq
DB search
MADYSTVXPPAAGAPGGGGGGAGGVNDAFKDALQRARQIAAKIGGDAGTSMNSNDYGYGG
QKRPLEDGDGSWTSPSSTTHWEGMPSPFKDQPDAKKVAPQNDSFGNQLPPMHQQQRSVMT
EEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKR
LLDQIVEKGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMI
QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPI
PRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDL
LRSVQAGNPGGPGPGGRGRGRGQGNWNMGPPGGLQEFNFIVPTGKTGLIIGKGGETIKSI
SQQSGARIELQRNPPPNADPNMKMFTIRGTPQQIDYARQLIEEKIGGPVNPLGPPVPHGP
HGVVPGPHGPPGPPGPGAPMGPYNPAPYNPGPPGPAPHGPPAPYAPQGWGNAYPHWQPPN
PPDPGKPGTDPNSAAWAAYYAHYYQQQAQPPPAAPPGGPATTQTNGQGDQPNPAPAGQVD
YTKAWEEYYKKMGQAVPAPAGAPPGGQPDYSAAWAEYYRQQAAYYAQTSPQGMPQHPPAP
QCLPRPSTLGSAAKKQQTFNHH
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcggactattccaccgtgncccctcctgctgcgggcgcgcccgggggaggcggcggc
ggggctggaggagtgaacgatgcctttaaagacgcgctgcagagggctaggcagattgca
gcgaaaattggaggagatgctggcacgtcaatgaattcaaacgactacggttatggaggg
cagaaaagacctcttgaggatggagatggctcttggacaagtccgagcagtacaacacac
tgggagggaatgccctctccttttaaagatcaaccagatgctaagaaagttgctccccag
aatgactcttttggaaatcagctaccaccgatgcatcagcagcaaaggtctgtcatgaca
gaggagtacaaagttccagatgggatggttggattcataattggcagaggcggagagcag
atctcacgcatacagcaggagtctggctgtaaaatacagattgcacccgatagtggaggc
ctgcctgaaagatcatgtatgctaactggaacaccagagtctgttcagtcagcaaaaaga
ttacttgaccagatagttgaaaagggaagacctgcacctggatttcatcatggtgatgga
cctggaaatgcagtccaagaaattatgattccagcaagtaaagcaggattagttattggg
aaaggtggagagacaattaaacaattacaggagcgggcaggtgtcaaaatggtcatgatt
caagatggtccgcagaacactggtgcagacaagccccttaggataactggagacccttat
aaagttcagcaagccaaggaaatggtgctggagttaattcgtgatcaaggtggctttaga
gaggtgcgcaacgaatatgggtcaagaataggaggaaatgaagggatagacgttccaata
ccacgatttgctgtaggtattgtaattggaagaaatggagagatgataaaaaagatccag
aatgatgctggtgttaggatccagtttaagccagatgatggaacaactcccgatagaata
gcccagatcacagggcctccagacagatgtcagcatgctgcagaaattattacagatctc
cttcgcagtgttcaggctggtaaccctggtggaccaggacctggtggtcgaggaaggggt
agaggccaaggcaactggaacatggggcctcctggtggattacaggagttcaattttatt
gtccctactggcaaaactggattaatcattggaaaaggtggtgaaactattaaaagtata
agccaacagtctggtgctagaatagaacttcaaagaaatcctccacctaatgcggatccg
aacatgaagatgtttactatccgtggaacaccccagcaaatagattatgcacgacaacta
atagaagaaaagattggaggtccggtgaatccattgggtccacctgttccccatggtccc
catggtgttgttcctggcccgcatggacctcctgggccaccaggtcctggtgctcccatg
ggaccatataatccagctccttataatccaggccctcctggtcctgcgcctcatggtcct
ccagctccatatgctccacagggatggggaaatgcttatccgcactggcagccacctaac
ccaccagatccaggtaagccaggaacagatcccaattcagcagcgtgggcagcttattat
gctcactattatcagcagcaagcacagccaccacctgcagcccctcctggtggaccagct
acaacacaaactaatggacaaggagatcagccaaatccagcaccagcagggcaggttgac
tataccaaggcctgggaggagtactacaaaaaaatgggtcaagctgttcctgcccctgct
ggggctcctccgggcggtcagccagattacagcgcagcgtgggctgagtactacaggcag
caggcagcatactacgctcagacaagtccacagggaatgccacagcatcctccagcacca
cagtgccttcccagaccttccaccttaggttctgctgcaaaaaagcaacagacatttaat
catcactga
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