Corvus cornix (hooded crow): 104695320
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Entry
104695320 CDS
T03546
Symbol
GTF2B
Name
(RefSeq) transcription initiation factor IIB isoform X2
KO
K03124
transcription initiation factor TFIIB
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104695320 (GTF2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104695320 (GTF2B)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
104695320 (GTF2B)
Prokaryotic type
Archaeal type
TFB
104695320 (GTF2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
BRF2-like_C_cyclin_rpt
RB_B
Sigma70_r4
KIF9
Motif
Other DBs
NCBI-GeneID:
104695320
NCBI-ProteinID:
XP_010407371
LinkDB
All DBs
Position
8:complement(15714972..15737113)
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AA seq
323 aa
AA seq
DB search
MGLYTRAMHFPSVLDVLPRVTCPNHPDSILVEDYRAGDMICSECGLVVGDRVIDVGSEWR
TFSNDKATKDPSRVGDTQNPLLSDGDLSTMIGKGTGAASFDEFGNSKYQNRRTMSSSDRA
MMNAFKEITNMADRINLPRNIVDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGV
PRTFKEICAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAAT
HIARKAVELDLVPGRSPISVAAAAIYMASQASSEKRTQKEIGDIAGVADVTIRQSYRLIY
PRAPDLFPADFKFDTPVDKLPQL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgggcctttacacacgtgccatgcattttccttcggttttggatgtactgccaagagtg
acttgcccaaatcatccagattccattttagtggaggattacagagctggtgatatgatt
tgttctgagtgtgggcttgtagtaggtgaccgcgtcatagatgtgggatcggagtggaga
acattcagcaatgacaaagcaaccaaagacccatctcgagttggggatactcagaatcct
ttgctcagtgatggtgacttgagtacaatgattggcaagggcacaggtgcagcaagtttt
gatgaatttgggaattcaaagtaccaaaatcgcagaactatgagcagctctgatcgtgcg
atgatgaatgcttttaaagaaattacaaacatggcagacagaatcaacctccctagaaat
atagttgatcgaacaaataatttattcaagcaagtgtatgagcaaaagagcctgaagggg
agaagtaatgatgctattgcctctgcttgtctctacatagcctgtaggcaagagggggtt
ccaagaacatttaaagaaatatgtgcagtgtccaggatttcaaagaaggaaataggccgg
tgttttaaacttattttgaaagctctggaaaccagtgtggatttgattacaactggagac
ttcatgtcacgattctgttctaatctgggtcttcccaaacaagtacaaatggcagcaaca
catattgcccgtaaagctgtggaattagatttggttcctggaagaagccctatctctgta
gcagctgcagcaatttacatggcatcacaggcttcttcagagaaaaggacacaaaaagaa
attggagatattgctggtgtggctgatgttacgattagacagtcatacaggctgatctat
cctcgagctcctgatcttttcccagcagacttcaagtttgataccccagtagacaagcta
ccacagctgtga
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