Corvus cornix (hooded crow): 104695328
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Entry
104695328 CDS
T03546
Symbol
HFM1
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104695328 (HFM1)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
104695328 (HFM1)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104695328 (HFM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
104695328
NCBI-ProteinID:
XP_010407391
LinkDB
All DBs
Position
8:complement(16394871..16440184)
Genome browser
AA seq
1507 aa
AA seq
DB search
MFQNKPVNSIRVSGPYSNYPGNSIILFCKNVTDCDHNKNNWRKDRFKSSNFSFTVACAAL
RRLRDFPFDIKMFNSADMVFSLDNLFYEKPDMRQRCLENEERKTWFIAPAPAIAEIPAAE
ELQRELEENSASTHKAGRKDETFTEQCKSNTEEVEDKSSAPVYFGIAPEKEVLQLSLGER
DQISFQRENMKVVSSFLSSDENKSRRVIDFSQRPQNNALNDFLENSDDESVHSTLRKRLF
KKSGNTYKNTELKADSVDMKEIGTYLNTSENMKEVTKEGLWRNNHHAPITKDPDFTLHRG
NNEELVSENGIKIQSFSNASEILDMTGTTGRKLEILRAVTEIPTQFRSIFKEFPYFNYAQ
SKALDDLLYTDRNFVICAPTGSGKTVMFELAITRLLMEVPQPWLNIKVVYMAPIKALCSQ
RFDDWKEKFGPIGLTCKELTGDTLMDDLFEIHHADIIITTPEKWDSMTRRWRDNSIVQLV
RLFLIDEVHVIKDESRGATLEVVVSRMKTVQASLWRLLESHDAVPPLRFVAVSATIPNTQ
DIAEWLSDSKMPAVCLKIDEDQRPVKLRKIVLGFPCSDNQTEFKFDLTLNYKIASIIQTY
SEQKPALVFCATRKGVQQAASVLAKDAKFLLSIEQKQRLQRFANSLKDSKLRDLLTYGVA
YHHAGMEMSDRKIIEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHYVGGVFQEYS
ETDILQMIGRAGRPQFDTTATAVIMTRCSTRERYIQMLNGADIIESSLHRHLVEHLNAEI
VLHTVTDVSVALEWIRSTFLYIRALKNPTHYGFSSGLDKVGIEAKLQELCLKNLNDLSSF
DLIRMDEASNFKPTETGRLMAWYYIAFDTVKQFFTIKGTETLNELITMISNCTEFVDVKL
RTNEKKILNTLNKDKDKITIRFPMEGKIKTREMKVNCLIQAQLGCIPIQDFTLTQDTGRI
FRNGLRVTRWLSDFLASSKNNFSALLNSLILAKCFRCRLWENSLHVSKQLEKIGVSLSNA
MVNAGLTSFKKIEDTNARELELILNRHPPFGNQIKESVLHLPKYELDIEQLPKYSDMLAE
ILVTVKLTNYEQLQTKRTAPDFHYVTLVIGDADNQVIFNQKIMDSVLLKTGNWMKKIEVK
RALRSEDISINLISSDYVGLDIQQAYTAFYLTPKPEGHKVVTNQKLTAESTRDTCYGSPQ
SLPAAKVDTGGRSKQEIAYKKYGNRECNHRCKNKDVCGHDCCKTGVPPKSQMNGDTKFSL
YLADLRSRNSVSSIPPVKRLKVQMLNQHVENVDLKQFVFTPKSLLPALPRSSNKLSSSSP
SVDQVDNTLEVSQKQLQSWNCGKSNSLNVDFELRDDIWDDIDDEKLVFASNFVSRELDEC
QPLCQYTTSKATNNISKDLCTVQDETNIQNSDVSVVSSTSRVNLSVQNRNITSFSFQEKK
HSSPSQELKNVQCSAMSEIISDSSKFSRKEDFFIFTKEQEKEVDPRCLLDDEVNDVKPFL
GIFDGIL
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaacaaacctgttaacagcattagggtgtcgggcccatactccaattaccca
ggtaacagtataattttgttttgcaaaaatgtgacagactgtgatcataacaaaaacaat
tggagaaaagacaggttcaagtctagtaatttcagttttacggttgcttgtgctgccctt
agaagactaagagacttcccatttgatataaaaatgttcaactctgcagacatggtcttt
tcactggataatttattttatgaaaaaccagatatgagacaaaggtgtctggaaaatgaa
gagcgtaagacttggtttattgcacctgctccagctattgctgaaattccagctgcagag
gagctacagagggaactggaagaaaactcagccagcactcataaggcaggaagaaaggac
gagacgtttacagaacaatgtaagagtaacacagaggaagtagaagataaatcatcggca
cctgtttattttggcatagcccctgaaaaagaagtcctgcaactaagtctaggagaaaga
gatcaaattagttttcagcgtgaaaacatgaaagtggtttcatcttttctctcttctgat
gaaaataaatctagaagagtcatagatttttctcagcgaccgcaaaataacgcattaaat
gattttttagaaaacagtgatgatgagagtgtccattcgacattaagaaaaaggttattt
aaaaagtctggcaacacgtataaaaatacagaacttaaagctgactctgttgatatgaaa
gaaattggtacttacttaaatacaagtgaaaacatgaaagaagtgacaaaagaaggttta
tggagaaataatcatcatgctccaataactaaagatccagattttactttgcatagggga
aataatgaggagcttgtgtctgaaaatggaattaaaattcaatcattttctaatgcttca
gagattctggatatgacaggaactacaggaagaaaattggaaattttgagggctgttaca
gaaatacctacacaatttagaagtatttttaaggagttcccatattttaactatgcacag
tcaaaagctttggatgatcttttatatacagataggaactttgtgatttgtgctccaact
ggctctggaaagactgtaatgtttgagctagctattaccagattactcatggaagtccca
cagccttggttaaatattaaagttgtttatatggctccaataaaagccctatgcagtcag
cgttttgatgactggaaagaaaaatttggacctataggactgacctgcaaggaactgaca
ggagatacactgatggatgatttatttgaaatacatcatgctgacattattatcactaca
cctgaaaagtgggatagcatgactagaaggtggagagacaactctatagtccagcttgta
cgactgtttctcattgatgaggtacacgttataaaggatgaaagccgtggcgcaactttg
gaagttgtagtcagtcggatgaaaactgttcaggcttctctttggcgtctgttagagagt
catgatgctgttcctcccttgagatttgtagctgtttctgcaacaatcccaaatactcaa
gatatcgcagaatggctttcagatagtaagatgcctgctgtatgcctgaaaatagatgag
gatcaacgaccagtgaagctacgcaaaattgttcttggttttccttgcagtgacaatcag
acagaattcaaatttgacttaactcttaactacaagatagctagcattatacaaacatac
tcggaacaaaaaccagcacttgtgttttgtgccacaagaaaaggagtacagcaggctgct
tctgttcttgcaaaagatgctaaatttctactgagtatagaacagaaacaaagattacag
aggtttgcaaattctttgaaagactccaaactgagagaccttttaacatatggtgtggct
tatcatcatgcgggtatggagatgtcggacagaaaaataattgaaggagcttttactgta
ggagacttgccagtactttttactactagcaccctagctatgggagtcaatctacctgca
cacctggtggttataaaatccacaatgcattatgttggaggagtgtttcaagagtacagt
gaaaccgatattctgcaaatgattgggagagctggaaggcctcagtttgacactacagct
acagcagttattatgactcgttgcagtaccagggagagatatatacagatgttaaatggt
gctgatataatagagagcagcttgcacagacaccttgttgagcacttaaatgcagaaata
gtgctacatactgtcacggatgtcagtgtagctttggaatggatacgatcaacattcttg
tacattagagccttaaaaaatccaactcattatggtttttcatctgggttagataaagtt
ggaattgaagcaaaattacaagaactgtgtctgaagaacttaaatgatttatcatctttt
gatttgatcaggatggatgaagcaagtaatttcaaaccaacagagactggaagattaatg
gcatggtattatattgcatttgatacagtgaagcagtttttcacaattaagggaactgag
actctaaacgaattgattacaatgatctccaactgcacagaatttgtggatgtgaagtta
agaacaaatgaaaagaaaatattgaacactttgaataaagacaaagacaaaataactatc
aggtttccaatggaggggaagataaaaacaagagaaatgaaagtaaactgtctcattcag
gctcagctgggatgtattcctattcaagactttactttgacacaagatactggcagaata
tttagaaatggcttaagagttactagatggttatctgactttctggcatcgtctaagaac
aacttttctgctttattaaactctttgattttagcaaagtgtttcaggtgcagactttgg
gaaaattcacttcatgtgtctaaacaattggaaaaaattggtgtatcactgtcaaatgct
atggtaaatgctgggctgacgtcatttaaaaaaattgaagacacaaatgcaagagaactt
gaattgattttaaacagacatcctccgtttggaaaccagataaaagagtctgttttgcac
cttccaaaatatgaacttgacattgaacagcttccaaagtacagtgacatgttggctgaa
atcttagtaaccgtcaaattaacaaattatgagcagctacagacaaagagaacagcgcca
gactttcactatgttacattggtcataggagatgctgacaaccaagtcatttttaatcag
aaaattatggattctgtgctgctgaaaactggaaattggatgaagaaaattgaagtgaaa
agagctcttagatcagaagacattagcataaatttaattagttctgattatgttggcctt
gatatacagcaagcatatacagccttctacttaacaccaaaaccagagggacataaggtg
gttacaaatcaaaaattgacagctgaatctacacgtgatacatgttatggctcaccccaa
agtctgccagcagcaaaagtagatacaggaggcagatctaaacaagagattgcttacaag
aaatatggaaacagagaatgcaaccaccgctgtaaaaataaagatgtgtgtgggcatgac
tgctgtaaaactggcgtacctccaaagtcacagatgaatggagacacaaagttttctttg
tacctagctgatttaaggagcaggaactcagtttcatctatacccccagtaaaacggcta
aaggtgcagatgttaaatcaacatgtggaaaatgtggatctcaaacaatttgtttttaca
cctaagtctttactgccagccttgccaaggtctagcaataaactgtcatcttcatcacct
tcagtggaccaggtagataataccttagaagtatctcagaaacaactgcaatcctggaat
tgtggaaagagtaattctttgaatgtggactttgaactgagagatgatatttgggatgat
attgatgatgagaaattggtatttgctagtaattttgtcagtagagaattagatgagtgt
caacccctctgccagtatacaacaagcaaagccacaaataacatttcgaaagatttatgc
acagtacaagatgagaccaatattcagaactcagatgtttctgtggtcagtagcacatca
agagtgaatttatctgtacagaacagaaatataacttcgttcagttttcaagaaaaaaag
cattcaagtccttctcaagagctaaaaaatgtacagtgttctgccatgtcagaaataatc
tcagattcttctaaattctctaggaaggaagatttttttattttcacgaaagaacaggaa
aaagaagtagatcctagatgtcttcttgatgatgaagtcaatgatgtcaagccctttctt
ggaatatttgatggtattttgtaa
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integrated database retrieval system
