Corvus cornix (hooded crow): 104695376
Help
Entry
104695376 CDS
T03546
Symbol
CFAP43
Name
(RefSeq) cilia- and flagella-associated protein 43 isoform X1
KO
K24223
cilia- and flagella-associated protein 43
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
ccw03037
]
104695376 (CFAP43)
Cilium and associated proteins [BR:
ccw03037
]
Motile cilia and associated proteins
Tether/Tether head (T/TH) complex
104695376 (CFAP43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
CFAP43_N
WD40_CDC20-Fz
WD40_MABP1-WDR62_1st
Beta-prop_WDR90_POC16_2nd
WD40
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
104695376
NCBI-ProteinID:
XP_010407498
LinkDB
All DBs
Position
6:11731906..11775062
Genome browser
AA seq
1673 aa
AA seq
DB search
MEGPGMEGPARAAEAALEVSWVQGFSDKNFGFINDQTVCYPCGNYILFLDIETKKTRALQ
CQTGQVGAFAANANSQVLAFSDRKLNPIIYIYTFPELSKPTELKGDAQLDYTLLSFSFTG
PYLASYSSIPEFVLSVWNWQENILLCSESQPGLTGTSLSFNPMNWQQLCFVAESSVTIWH
VERCKDEHHLTRHPVELPDGHGTVTPHEDLFFPPSRNDDPYHGPDLPVSAIAGLEGDEAE
TFVPRNCIKTSVHPTAHCWTATSEIYMGCKEGYVLAIDAEKYSVSVLQQKAPPEFMQKIA
DVVSYVRREAQKKKGGKPNNLQKPVLLAMAFCNEGLYAAGSEGILIFYHIKELQYEMKIC
ADISQPISSLIFSPDYTSLLLVTDQGTVYSYKPAHSGEAVKLLDTSSSCFLAADFLTPGN
NYCVSVTVSGEVQVWSLEDGTFLSKLNLGIEATSMACCPSSNSVAVGTQIGQICFVDVTK
AEAPRVVHKIFLSKLPVLSLHYDQRGQFLIARATEGHIFILDARPSELFQVLGYIVLADE
VLHLSVISDLKNDLVEVMVLLNVAEVQQARLEIFHLSSAIATDNDKYVNEQGVFNTSDLK
KEQYDLDCPLSSAVRLKDNIVYGYCTCAPFICKYHLSEESKLEDPSVYSSEKRIPSNQFG
SGLLCLSPNSQWLAAAAKDGVLFIYNTSTLDILAQKHCQSYQGGGIRSMVFSLDGNFILV
NGENDCALVCLKWKEIKETEVEQAALYWQSLLEILNKSTSDENSFLKSMPEWKFDPESTS
KSLPEAPLKSSTAEVAEEDGNVTNTNDMTWIGQKMQKVMREDTRRFANQKEEVQMGIKKL
RETIQKMMHENEQVPDIEKLEHWEFNLDLEEQERVQEEAERDVARARKEIEMENLSYCYL
QDLIKYDCWDVMCVKGRAVKCFHMDCQVSNYPLKERSKEELETLKKVLHLKKTETADLKA
QKKTLEVDSETALSEEEGEKAAEEVADNGASHCLNGSLSCQYGGDTSTLYHQCDLHTREQ
KLHQTILLKDVIYKVKTAFNEEFDAIVQQKEQEIARVKEANMKIREILEQLELQVEVWEP
VLTDDEMPERALTVQDSEIKAEKYLTQEEKEQLELQAKLERERRLAAMDDERLRALDDMM
GGVLEIRREDVLKMDIPPPSFISRPEDLWSEEEKKTFEDYEKKVKELNEDKEEYREFLRN
EWKKLEDSIKETTQNFDESVCKLSEKKVKSQMVIYQEELKIVNLIYALLLDEELDTREAG
LHKFLTKKKKEKVKSARKILTAKNGVEAYTGPYKDAIHEGKSLEHGFIEEFADIPEDLLH
ELLQLYKHRPETPWTETLLDTANPYVKGSPEDCQDALSLLMKAMDELDSPEHMPSGLDQS
VWERFCLARRNKMESEELGKWKALALEEMQAFLRRRVDENEKMKSELENIFQELTWLKEE
KMKLQQNLMVQFLLKQGQVELGSTEVPDYSDAVLINRSVVEELNSTLAAQGEKKITAMVE
FKDFSKGIIQLEWEHKKMKMQIQDLTEKARDIVILPISKDCQLFLTVQNYDTHIAQHLAG
MEQSLGVMDKLHKKNVKNHQKKVRELKKGIRLKEQANYELSLQLKEMLISVSERMHIIEA
ADTRDISEKITKQRYQEILKQKYLRNFIREQEKQLTILQSEAESLKPRILHIV
NT seq
5022 nt
NT seq
+upstream
nt +downstream
nt
atggagggccccggcatggagggccccgcccgcgctgcggaggccgcgctggaagtgagt
tgggttcagggattctcagataagaactttggctttatcaatgatcaaactgtctgctat
ccttgtggtaattacatcctcttcctggacatcgaaacaaagaagacaagagcactgcag
tgtcagactggccaggtgggagcctttgcagcaaatgccaacagtcaagtgctggccttt
tctgaccggaagctcaatcccatcatatacatctacacttttcctgaactgagtaaaccg
acagaattaaaaggtgatgctcagctggactataccttactttcatttagtttcacaggc
ccatatctggccagttactcttcgatcccagaatttgttctttcagtatggaattggcaa
gaaaatatcctcctgtgcagtgagtctcagccagggctaacagggacctctctgagtttt
aaccctatgaattggcagcagctgtgttttgttgctgagagctccgttaccatctggcac
gttgagaggtgtaaggacgagcatcaccttacgcgacaccctgtggaactccccgatggt
catgggactgtgactcctcacgaggatttgtttttcccaccttctcgtaatgatgatcca
taccatggccctgatttgccagtttcagccattgctggcctggaaggagatgaagcagaa
acatttgtgcctagaaattgtattaagacttctgtgcatcccactgcccactgctggact
gcaacctcagaaatatacatgggctgtaaagaaggatatgttttggcaattgatgctgag
aagtacagtgtttctgttcttcaacaaaaagctccacctgagttcatgcagaaaatagcg
gatgtggtgtcctatgttcgtagagaagcgcagaaaaagaaaggtggcaaaccaaacaat
ctgcaaaaaccagttttacttgccatggcattttgtaatgagggactgtatgcagctgga
agtgagggcattttaatcttttatcacatcaaagagctgcagtatgagatgaaaatctgt
gcagatatctcacagcccatttccagcctcatattttctcctgattacaccagtcttctg
cttgtcactgaccaggggacagtctatagttacaaacctgcccatagtggagaagctgtc
aaactcttggacacatccagcagttgttttctggcagctgattttcttactccagggaac
aactactgtgtgtctgtaacagtttcaggtgaagtacaagtttggtccttggaagatgga
actttcctcagcaagctaaaccttggtattgaggcaacttctatggcttgctgtccctcc
tccaacagtgttgctgtagggacccaaataggtcaaatctgttttgttgatgttaccaaa
gctgaagctccacgcgttgttcacaaaattttcctttccaaacttccagtgctgtctttg
cattatgatcagaggggccagttcctcattgcaagagctacagaaggacacatctttatt
ctagatgctcgtccatcagaattattccaagttctgggatatatagtactggcagatgaa
gtgctccacctttctgtaatttctgacttaaagaatgacttagttgaagtgatggtactt
cttaatgtagcagaggtccaacaagcacgactggaaatttttcatctgtcttcagcaatt
gcaacagataatgataagtatgtgaatgaacaaggagtgtttaacactagtgacttgaaa
aaggagcaatatgatctggattgccctttgagctcagcagtcagattgaaggataacatt
gtgtatggctactgcacctgtgcacctttcatctgtaaataccacctctctgaagagagt
aagttggaagatccatcagtatattcatcagaaaagaggattcctagcaatcagtttgga
tcaggtttgctctgtttatcacccaacagccagtggctggcagcagcagccaaggatggt
gttttgtttatctacaatacttctactctggatatacttgctcaaaagcattgtcagtcg
tatcaaggagggggaatcagatccatggtattctccctggatggcaatttcatcctagtt
aacggtgaaaatgattgtgccctggtgtgtctgaagtggaaggagataaaagaaactgaa
gtagagcaagctgctctttactggcaatctcttcttgaaatactgaacaagtctacttca
gatgaaaattcatttttaaaatctatgccagaatggaagtttgacccagagtccacatca
aaatcacttccagaggcaccactgaaatcttccactgcagaggtggcagaagaagatgga
aacgtcacaaataccaacgacatgacatggatagggcagaaaatgcagaaggttatgaga
gaagacactcggagatttgctaaccagaaggaagaagtgcaaatgggaattaaaaagctg
cgtgaaactattcagaaaatgatgcatgaaaatgagcaggtgccagacattgagaaactt
gagcactgggagttcaacctggatttagaagaacaggaacgagtgcaagaagaggctgaa
cgagacgtggccagggcgaggaaggagattgagatggagaatttatcctactgctatttg
caagatttaatcaaatatgactgctgggatgttatgtgtgtaaaagggcgtgcagttaag
tgcttccatatggattgtcaagtgagtaattatccactgaaggaacgtagtaaagaagag
ctggaaactttgaagaaagttcttcacttaaagaagactgagacagctgatcttaaggct
cagaagaaaactcttgaggttgactctgagactgctttatctgaggaagaaggagagaag
gcagcagaagaagtggctgacaatggtgcatctcactgcctaaatggaagcctgagctgt
cagtatggtggcgacacatctaccctataccaccaatgtgacttgcacaccagggagcag
aaactccatcagacaatattattgaaggatgtaatttacaaagtgaaaactgcttttaat
gaggaatttgatgcaattgtacaacaaaaggagcaggagatagcacgagtgaaagaagca
aacatgaagatccgagaaatcctggaacagcttgaacttcaagtggaagtgtgggagcca
gtccttacagatgatgagatgccggagcgagcgctcactgttcaggattcagagattaaa
gctgagaaatacttgactcaagaggagaaagagcaattggaattgcaggctaagcttgaa
cgggaaagacgccttgctgctatggatgatgaaagactgcgtgctcttgatgacatgatg
ggtggagtgctagaaatcaggagggaagacgttttgaaaatggatatccctccaccttct
tttatatccagacctgaggatctttggagtgaagaagaaaagaaaacatttgaagactat
gagaaaaaagtcaaggaactgaatgaagacaaagaagagtatagagagtttctaagaaat
gaatggaagaaacttgaagattccatcaaggaaacaacacaaaattttgatgagagtgtc
tgcaaactctctgaaaagaaagtgaaatcacagatggtcatctaccaggaagaactcaaa
atagtcaatctcatttatgctttactgttggatgaagagttggacaccagagaagctgga
cttcataaattccttacaaaaaagaagaaagaaaaagtcaagagtgcaagaaaaatcctg
actgcaaaaaatggtgttgaggcttacacaggcccctataaagacgcaatacatgaaggg
aagagcctggaacatggttttatagaggagtttgctgatatacctgaggatctccttcat
gaacttctacaactttacaagcatcggccagagaccccatggactgaaaccctccttgac
accgccaacccctatgtgaagggatcacctgaggattgccaagatgcactttccctttta
atgaaagccatggatgaactggatagtcctgagcacatgcctagtggcttagaccagtct
gtgtgggaacgtttttgtctggctagacgaaataaaatggagagtgaggagctggggaaa
tggaaggccctagcactggaagagatgcaggcctttctccggagaagagtggatgaaaat
gagaagatgaagtcagaattagagaacattttccaagaactcacttggctgaaggaggaa
aagatgaagcttcagcagaatttgatggtccagtttttgctaaaacaaggacaggtggaa
ttgggaagtactgaggtcccagactacagtgatgctgttctcattaacaggagtgttgtt
gaagaactgaatagcactcttgcggctcaaggagaaaaaaaaattactgccatggtagaa
tttaaagacttctctaaagggataatacagctggaatgggaacacaagaaaatgaaaatg
cagatacaagatctgacagagaaggctcgggatattgtaatactacctatttcaaaagat
tgccagctattcctaactgtgcagaactacgacacccacatcgctcagcacttagccggg
atggagcagagtcttggtgtcatggataagttgcacaagaagaatgtgaagaaccatcag
aaaaaagttagagagctgaagaagggcatccgtctaaaagagcaagcaaactacgagctc
agcctgcagctgaaggaaatgcttatctctgtgtcagaaaggatgcacatcattgaggca
gctgacacacgggatatttctgaaaagatcacaaagcagcgttaccaagagattttgaag
cagaaatatctacggaactttataagggaacaggaaaaacagcttacaattcttcagtca
gaagctgaaagtctgaaaccaagaatactccatattgtttaa
DBGET
integrated database retrieval system
