Corvus cornix (hooded crow): 104695500
Help
Entry
104695500 CDS
T03546
Symbol
DNAJC6
Name
(RefSeq) putative tyrosine-protein phosphatase auxilin isoform X1
KO
K09526
DnaJ homolog subfamily C member 6
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
104695500 (DNAJC6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ccw03041
]
104695500 (DNAJC6)
03110 Chaperones and folding catalysts [BR:
ccw03110
]
104695500 (DNAJC6)
04131 Membrane trafficking [BR:
ccw04131
]
104695500 (DNAJC6)
Spliceosome [BR:
ccw03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
104695500 (DNAJC6)
Chaperones and folding catalysts [BR:
ccw03110
]
Heat shock proteins
HSP40 / DNAJ
104695500 (DNAJC6)
Membrane trafficking [BR:
ccw04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
104695500 (DNAJC6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PTEN_C2
DnaJ
Y_phosphatase
Motif
Other DBs
NCBI-GeneID:
104695500
NCBI-ProteinID:
XP_039411590
LinkDB
All DBs
Position
8:complement(1588140..1629894)
Genome browser
AA seq
982 aa
AA seq
DB search
MSLLGSYRKKPGSDGYESLQLVDSGAERGGAGAGPAGPGRSPGRQQQQPQPRADGGSTMD
SSGASSPDMESSYGGGLLDMVKGGAGRLFSNLKDNLKDTLKDTSSKVMQSVASYTKGELD
ISYITSRIIVMSFPAEGVELGFRNHIEDVRTFLDSRHPDHYTVFNLSPKYYRSAKFHNRV
SECSWPVRQAPSLHNLYAVCKNMHNWLQQNPKNVCVIHCMDGRAASAVLVSAMFCFCHLF
SHPGPAVQLLNTKRPGIVLWPSHRRYIGYICDLIADKPVIPHCKPLTIKSVTLSPVPCFN
KQRNGCRPFCDILSGETRILTTSQEYERMKEYRVQEGKVLIPLGATVHGDVVVSVYHMRS
TIGGRLQAKMTNTQIFQIQFHTGFIALGTTTLKFTKPELDACDSPDKYPQLFHVILDIEI
QSADRQTELTPPWENFTTKDINPSILFSSHQEHQDTLALAGRGATDSPQDNIRNVGQSAF
FSSLSWQDQKSDKSSSHPTSEDRAALVHEESEQSDDELLSLSSQHSNASGDKPHGTPKHS
KKQQEPPAAPPPEDVDLLGLDGSPMSKSFPSQPSAAPSNSDLLNDLFGVGGPSSQSPSGA
AAEEVFHVGAPGSVQSTPRRSAASASPSPSPRVGEATAFDPFGSSPKQTGPDLLGSFLGS
SAVPGDPFLQATRSPSPTVHSDPFHMASSTPTVSIQPDVSSGWDWPNKAGGLGMGSKSAA
TSPTGSLHSTPTHQAKPQTLDPFADLGSLGASLAGGPSFASKPTTPTGMGGGFPPSPQKP
PPQPMGGSGWQQGAGYGWQGAQPKGQPSVPHASPQNKPNYNVSFSATAGAQGERGKGPAS
ADSKPKVSADFEDLLSGQGFNAHKDKKGPKTIAEMRKEEMAKEMDPEKLKVLEWIEGKER
NIRALLSTMHTVLWAGETKWKPVSMADLVTPEQVKKVYRRAVLVVHPDKATGQPYEQYAK
MIFMELNDAWSEFENQGQKPLY
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atgagcctgctggggagctaccggaaaaagccgggcagtgacggctatgaatccttgcag
ctcgtggacagcggcgctgagcgcggcggggccggcgcggggccggcggggccgggccgg
agccccgggcggcagcagcagcagccgcagccccgcgccgacggcggcagcaccatggac
agctcaggtgcctcgtcaccagacatggagtccagctatgggggaggcctgctggacatg
gtgaaaggaggagcagggaggctcttcagcaatctgaaggataacctgaaggataccctg
aaggacacctcctccaaggtcatgcagtctgttgccagttacaccaagggagagctggat
atttcctacattacctcaaggatcatagtgatgtcttttcctgctgaaggcgtggagctg
ggattcaggaatcacattgaggatgtcaggacgttcctggactccaggcaccccgaccac
tacaccgtgttcaacttgtcacccaaatattatcgcagtgccaagttccacaacagggtg
tctgagtgtagctggcccgtccggcaggcgcccagcctgcacaacctctatgctgtctgc
aagaacatgcacaactggctgcagcagaaccccaaaaacgtctgtgtcatccactgcatg
gacggccgtgcagcctcagcagttctggtcagtgcaatgttctgtttctgtcacctcttc
tctcatcctggccctgctgtgcagctgctgaacacaaagagacctggaattgtactgtgg
ccatctcacaggaggtacataggatacatttgtgacctaatagcagacaaacctgtcatc
ccccactgcaaaccactcacgatcaagtcagtcaccctcagccccgtcccctgcttcaac
aagcagcgcaacggctgccggcccttctgcgacatcctcagcggagagaccaggatcctc
accacttcccaggagtacgagaggatgaaagaataccgtgtgcaggaagggaaagtcctg
atcccactgggagccactgtccatggagatgttgttgtctctgtctaccacatgagatcg
accatcgggggacgcctccaagccaaaatgaccaacacacaaatattccaaattcaattt
catactggattcatagccctgggaacaaccactctcaaattcaccaagcctgagctggat
gcctgtgactctccagacaaataccctcagctctttcatgttatactggacatagaaata
cagtctgcagacagacaaactgaattaactcccccatgggagaacttcacgacaaaagac
atcaatccctccattctcttctcctcccaccaggagcaccaggacactcttgctttggca
ggtagaggcgccacggactccccccaggataacatcaggaacgttgggcagagtgcattc
ttctcctctctcagctggcaagatcagaaatctgacaaaagtagctctcaccccacctca
gaggatcgagcagcgttggtgcatgaggaaagcgaacagtcagatgacgaactcttgtcc
ctttccagtcagcacagtaatgccagcggtgacaagccccacgggacacccaaacacagc
aaaaagcagcaagagcctccagcagcacctccccctgaagacgtggacctgctgggcctg
gatggcagccccatgagcaagagctttccctcgcagcccagcgctgccccctctaactct
gacctgctgaatgatttgtttggggtcggtgggccgagctcccagagccccagtggagcc
gctgctgaggaggttttccacgtgggggcacctggatctgtgcagtcgaccccgcggcgc
tcggcagcttcggcgtccccgtccccgtccccgagggtaggagaagccactgcctttgat
ccatttggaagtagccccaagcaaacgggtccagacctcctgggttccttccttggctca
tcggctgtccctggggatcctttccttcaagccacaagaagcccttcaccaactgtgcac
agtgatccctttcacatggcttctagcactccaacggtttccatccaaccagatgtttcc
agtggttgggactggcccaacaaagcaggtggtctaggaatgggaagtaagtctgctgcc
accagtcctacaggatccctccacagcactcccactcatcaggccaaaccccaaacactg
gatccatttgctgatctgggaagtcttggagcgagtttagcaggtggcccctcgttcgcc
agcaagccgaccacgccgacgggcatgggcggggggttccccccgtcgccgcagaagccg
ccgccgcagcccatggggggcagcgggtggcagcagggagcggggtacggctggcagggg
gcacagcccaagggccagcccagcgtgccccacgcctccccccagaacaagcccaactac
aacgtgagcttctcagccacggccggggcgcagggcgagcgcgggaaaggacctgctagt
gctgattccaagccaaaagtgtctgcagatttcgaagatttattatctggtcaagggttt
aatgctcacaaggacaagaagggccccaaaacaatagctgagatgagaaaagaagaaatg
gcaaaggagatggaccctgaaaaactaaaagtcctggagtggatcgaagggaaggagagg
aatatcagggcactgctgtccacgatgcacacggtgctgtgggctggggagaccaagtgg
aagcctgtgagtatggccgatctggtgactccagagcaggtgaagaaggtgtacaggcgg
gctgtgctcgtcgttcacccggacaaggctactgggcagccatatgaacaatatgcaaag
atgatatttatggagctaaacgatgcctggtcagaatttgaaaaccaaggacaaaaaccc
ttgtattag
DBGET
integrated database retrieval system
