KEGG   Corvus cornix (hooded crow): 104695543
Entry
104695543         CDS       T03546                                 
Symbol
KDM4A
Name
(RefSeq) lysine-specific demethylase 4A
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
ccw  Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:ccw03036]
    104695543 (KDM4A)
Enzymes [BR:ccw01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     104695543 (KDM4A)
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     104695543 (KDM4A)
Chromosome and associated proteins [BR:ccw03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    104695543 (KDM4A)
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 PHD_2 JmjN zf-HC5HC2H PHD DUF7141 LBR_tudor DUF4537 Rad9_Rad53_bind Tudor_5 53-BP1_Tudor
Other DBs
NCBI-GeneID: 104695543
NCBI-ProteinID: XP_039411613
LinkDB
Position
8:complement(10611866..10636012)
AA seq 1047 aa
MASELESLNPGQRIMTFRPTMEEFRDFSRYIAYVESQGAHRAGLAKIVPPKEWKPRQCYD
DIDELVIPAPIQQVVTGQSGLFTQYNIQKKAMTVREFRRIANSDKYCTPRYTDFEDLERK
YWKNLTFNAPIYGADVNGTLYDKHVDAWNIGRLNTILDIVENESGITIEGVNTPYLYFGM
WKTSFAWHTEDMDLYSINYLHFGEPKSWYSIPPEHGKRLERLAKGFFPGSAQSCEAFLRH
KMTLISPSILKKYGIPFDKVTQEAGEFMITFPYSYHAGFNHGFNCAESTNFATLRWIEYG
KQSVLCSCRKDMVKISMDVFVRKYQPDRYKLWKAGKDVTVIDHALPTPEAAEFLKGDLMQ
KVKNGKQCAEEMETEETCKEEVAGDETKSVPKHRIGTKRHRVCLEVPQEVSESEAFPKEE
LSSTQYEADMAEPCERPTSELVQQDHVDSAKFEELKTVKLEEEEEQEAAVLDLSVSHASN
STSVLPASKQSATSSVQSSSPAYSSDSESSDPLAKRTLPGPARVFTVHSYAKGDAGGSDN
EQTSGKKASATSSVNEQELTEVGKEYASSVKESKKSKGRRQPLSKLPRHHPLLVKDCISD
DEASEQLTPEEEAEETEAWAKPLSQLWQNRPPNFEAEKEYNRTMAQQPPYCAVCMLFQAY
QAECEGSSQNSGVTPAAADGKIRTKPLIPEMCFTATGCSTDLNLSTPYLEEDGTSVLITC
KNCHVCVHASCYGVSPDKATEDWMCSRCAENALEEDCCLCSLRGGALQRANDDKWVHVMC
AVAVLEAKFVNIAERSPIDVGKIPLQRFRLKCIFCKKRRKRIAGCCVQCSHGRCPTSFHV
SCAQAAGVMMQPDDWPFVVFITCFRHKTPSQAERAKAALQDLSPGQIVISKHKNGRFYQC
EVVSLAKETFYEVNFDDGSFSDNLYPEDIVSRDCLQLGPPAEGEVVQVRWTDGQVYGAKF
VASHAIQMYQVEFEDGSQLMVKRDDVYTLEEELPKRVKSRLSIASDMRFTEIFEEKEVSQ
ERKRQRVINSRYREDYIEPALYRAIME
NT seq 3144 nt   +upstreamnt  +downstreamnt
atggcctcggagctggagagcctcaaccctgggcagcgcatcatgaccttccgccccacc
atggaggagttccgcgacttcagccgctacatcgcctacgtggagtcgcagggcgcccac
cgcgccgggctggccaagatcgtgccgcctaaggagtggaagccgcggcagtgctacgat
gacatcgacgagctcgtcatccccgcacccatccagcaggtggtgacagggcagtccggg
ctcttcacgcagtacaatatccagaagaaggccatgacggtccgcgagttccgcaggatc
gccaacagtgacaagtactgtacaccccggtacacggactttgaagaccttgaacgaaaa
tactggaagaaccttacgttcaatgcccccatctacggagctgacgttaacggcacactc
tacgacaagcatgtagatgcgtggaatattggcagattgaacacaatcctggatattgtg
gagaatgaaagtggcataaccattgaaggagtgaatactccttacctatattttggcatg
tggaaaacttcttttgcttggcacaccgaggacatggatctctacagtattaattacttg
cattttggggagcccaagtcatggtactctatccctccagagcatgggaagcggctggag
agacttgcaaaaggttttttcccgggaagtgcccaaagctgtgaagcatttctccgtcac
aagatgactctcatctctccatcaattctgaagaaatacggaattccatttgataaggtg
acgcaggaggctggagagttcatgataacctttccttatagctatcatgctggctttaac
cacggctttaactgtgctgaatctaccaactttgctactcttcggtggattgagtacggg
aagcagtcggtgctgtgctcgtgtcggaaggacatggtgaagatctccatggatgtgttt
gtgaggaagtaccagccagatcgttacaagctttggaaagctgggaaggatgtgactgtc
attgaccatgctcttccaaccccagaggcagcagagttccttaaaggggatctcatgcaa
aaagtcaagaatgggaaacagtgtgctgaggagatggaaacagaagagacgtgtaaagag
gaggtggctggggatgagacaaaaagcgtccccaagcatcgcataggaacaaaaaggcac
agggtctgcctggaagtgcctcaggaggtgagtgagagtgaggccttccctaaggaggag
ctgagctccacacagtatgaagcggacatggcagagccttgtgaaaggcctacgagtgaa
cttgtgcagcaagatcatgtggactcagccaaatttgaggaattgaaaacagtgaagctt
gaggaggaggaggaacaagaagcagctgtactggatctctccgtttcacatgcttcaaat
tccacttcagtgttgccagcttcaaagcagagtgctacatccagtgttcagtccagctca
cctgcctattcttcagactctgaatcgtctgatccgttggcaaaacgaactcttcctggg
ccagccagggtgttcacagtccacagctatgctaagggggatgctggtggatctgacaat
gaacagacttcagggaagaaagccagtgccacctccagtgtcaatgagcaagaactcaca
gaggtgggaaaggagtacgcaagctcagtgaaggagagtaagaaatccaagggtcgtcgc
cagccgttgagcaaactcccgcgccatcacccgctcctggtgaaagactgcatcagtgat
gatgaggcatcagagcagctaactcctgaagaagaggctgaggagacagaagcatgggcc
aagccactgagccagctgtggcagaaccgtccaccaaactttgaggctgaaaaagaatac
aatcgcaccatggcccagcagcccccatactgtgctgtttgtatgctcttccaggcgtat
caggcagaatgtgaaggcagcagtcaaaactctggagtaactccagctgctgctgatggg
aagatccgaactaaacccctgattcctgaaatgtgctttactgccactggctgcagcact
gacctcaatctttcaactccctacctggaggaagatggaaccagtgtactcatcacctgc
aagaactgccatgtctgtgttcatgcgagttgttatggtgtatcccctgacaaagccact
gaagactggatgtgctcccggtgtgcagaaaatgccttagaagaggactgctgtttgtgt
tcattacgaggaggagcgctgcagagagccaatgatgacaagtgggttcatgtgatgtgt
gctgtggctgtactggaggcaaaatttgtgaacatcgcagagcggagtcctatagacgtt
ggtaaaatccccctgcaacgtttcagactgaaatgcatcttctgcaagaaaaggagaaag
agaattgcaggttgctgtgtacagtgctcacatggtcggtgccccacatcctttcatgtc
agctgtgcccaagccgcaggagtcatgatgcagcctgatgactggccatttgttgtcttc
attacctgcttcaggcataagactccatctcaggcagagcgagctaaggctgcactccag
gatctgtcccctggacagatagtcatcagcaagcacaagaatggtcgcttctatcaatgc
gaagtggtcagccttgcaaaggagactttctacgaggtcaactttgatgatggctccttc
agcgataacctgtacccagaggacattgtgagtcgagattgtcttcagttaggtccccct
gctgaaggggaagtcgtgcaagtgagatggacagacggacaagtttatggagccaagttt
gttgcatcacacgctatccagatgtaccaggtggaatttgaagatggttcacagctgatg
gtgaaaagggatgatgtatatactcttgaagaggagcttcctaagagagtgaagtcaagg
ctgtcaatagcttcagatatgcgcttcacagagatctttgaagagaaggaggtcagtcaa
gagaggaagagacaaagagtgatcaattcacgctaccgtgaagattatattgaacctgcc
ttgtaccgggccatcatggagtaa

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