Corvus cornix (hooded crow): 104695549
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Entry
104695549 CDS
T03546
Symbol
PIF1
Name
(RefSeq) ATP-dependent DNA helicase PIF1 isoform X1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ccw03032
]
104695549 (PIF1)
03029 Mitochondrial biogenesis [BR:
ccw03029
]
104695549 (PIF1)
Enzymes [BR:
ccw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
104695549 (PIF1)
DNA replication proteins [BR:
ccw03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
104695549 (PIF1)
Mitochondrial biogenesis [BR:
ccw03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
104695549 (PIF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
Pif1_2B_dom
AAA_30
AAA_19
UvrD_C_2
Herpes_Helicase
AAA_22
Motif
Other DBs
NCBI-GeneID:
104695549
NCBI-ProteinID:
XP_039412434
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All DBs
Position
8:11258542..11266763
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AA seq
631 aa
AA seq
DB search
MEAAELRCTAAVEQPLPGGLAPRRRVMRDATVLLGRNELRQPVLRVAGGSGAAAAVLSFA
LVGDAVRLFTRFAGEGRAAVRVGPDGAQVLLSDCPPDALRRFLRLLRLKVAAGSRDEPRR
PRLLDRPPPSFSVISPVQERDLLCGPGRRRAGEEPGERPAEVPRAERRPPARLSAEQEAV
LGAVRSGKSIFFTGSAGEGPWRLSSAPRGKSWPLTCCFSLKGTGKSFLLKKIVGSLPPNI
TYATASTGVAACHIGGTTLHAFAGIGSGKAPLEQCIQLAERPGVRQHWLACQHLIIDEIS
MVDGKFFDKLEAVARAVRKRDEPFGGIQLIICGDFLQLPPVCKANEETKFCFQAKSWRKC
IHINMELTEVRRQTDKTFVSLLNAIRLGRCTEEVTRQLMQTAAHRSERDGILATRLCTHK
DDVEITNERRLHQLPGEVHVFEALDSDPMLGKLIDAQCPVGGRVELKLGAQVMLAKNLDV
SRGLVNGARGVVAGFESEQKGLPKVRFLCGVTQLIKMEKWVFKGPSGIHLSRQQLPLKLA
WAISIHKSQGMSLDCVEISLSRVFESGQAYVALSRARSLAGLRVLDFDPKVVRADPAVLQ
FYRQLRRHQLLSQDSLHTNSDADEKENWECN
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggaggcggcggagctgcgctgcacggcggccgtggagcagccgctgccggggggactt
gctccgcgccgccgtgtgatgcgggatgcgaccgtgctgctgggccgcaacgagctgcgg
cagcccgtgctgcgggtggccggcggcagcggcgcggccgcggcggtgctgagcttcgcg
ctggtcggtgacgccgtgaggctcttcacgcggttcgcgggcgaggggcgggcggcggtg
cgcgtggggccggacggcgcccaggtgctgctgtccgactgtcccccggacgctctgcgc
cgcttcctccgcctcctgcggctcaaggtggccgccgggtcgcgggacgagccgcgccgt
ccccgcctgctggaccggccgccgccgtccttctccgtcatcagcccggtgcaggagcgg
gacctgctgtgcggccccggccgccgccgcgccggcgaagagccgggggaacgcccggcg
gaggtgccccgcgcggagaggcggcccccggcgaggctctcggcggagcaggaggcggtg
ttgggcgccgtgaggagcgggaagagcatcttctttaccggctctgcaggtgaggggccc
tggagactctcatcggctccccggggaaagtcctggccattgacctgttgcttctccctc
aaagggactgggaagtcgttcctgctgaagaaaatcgtgggctccctccctccgaacatc
acctacgctacagccagtacgggagtggcagcttgtcacatcggtggcactactctccat
gcctttgcagggattggctctgggaaggcaccgctggaacagtgcattcagctggcagag
aggccgggggtgcgccagcactggctggcctgccagcacttaattatcgatgagatctca
atggtggatggcaagttctttgacaagctggaggcagtggcaagggcagtcagaaaacgg
gatgaaccttttggaggaattcagctaattatctgtggggatttcttacagctaccccca
gtctgcaaggctaatgaagaaaccaagttctgcttccaggcaaaaagctggagaaaatgc
atccacataaacatggagctgactgaagtgcggagacagactgacaagacctttgtctcg
ctcctgaatgcaatccgtttgggcaggtgcacagaggaggtcaccagacagctgatgcag
acggctgctcacaggtctgagcgtgatgggatcctggctacgcggctctgcacccataaa
gatgatgtagaaataaccaatgagagacgcttgcaccagctaccaggagaagtgcacgtg
tttgaggctttggatagtgacccaatgctagggaagttaattgatgctcagtgtcctgtg
ggtggtagagttgagctaaagctcggagctcaggtgatgctagcaaagaatttggatgtg
tctcgagggctggtgaatggggcacgaggtgttgttgcaggatttgaaagtgaacagaag
gggctgcctaaagtgaggtttctctgtggggtcacgcagctcataaaaatggagaaatgg
gtcttcaaaggaccctcaggaattcatctgagtcgtcagcaattgcctttaaaattggca
tgggccatttccattcacaagagccagggcatgtctttagattgtgtggaaatctccctg
tctcgtgtctttgaaagtgggcaggcttatgtagccctctcccgagcccgaagccttgca
ggtctccgtgttctggattttgacccaaaagtagtgagagctgatcctgctgtgctgcag
ttctacagacagctgagacgtcatcagcttctaagccaggattcactacacaccaattca
gatgctgatgagaaggagaactgggagtgcaactga
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