Corvus cornix (hooded crow): 104695562
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Entry
104695562 CDS
T03546
Symbol
RPAP2
Name
(RefSeq) putative RNA polymerase II subunit B1 CTD phosphatase RPAP2 isoform X1
KO
K20827
RNA polymerase II-associated protein 2 [EC:
3.1.3.16
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ccw01009
]
104695562 (RPAP2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ccw03021
]
104695562 (RPAP2)
Enzymes [BR:
ccw01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.16 protein-serine/threonine phosphatase
104695562 (RPAP2)
Protein phosphatases and associated proteins [BR:
ccw01009
]
HAD phosphatases
Fcp/Scp phosphatases
104695562 (RPAP2)
Transcription machinery [BR:
ccw03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
104695562 (RPAP2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP2_Rtr1
Motif
Other DBs
NCBI-GeneID:
104695562
NCBI-ProteinID:
XP_039411765
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Position
8:16784962..16820603
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AA seq
606 aa
AA seq
DB search
MAMMAAGTGKPRRRRAGNKHSAALKNEDAAQRKAALEAALRKKIEFEKKALSIVEQLLEE
DITEEFLLNCGKCITPSHYKDIVDERSIIKLCGYPLCHNKLENVPKQKYRISTKTNRVYD
ITERKCFCSNFCYRASKYFEAQISKSPVWMREEDKPPDIELLKEGQSGQSGEEVKLRDEV
IKASDIENPSISSDPCESASHDTASDSSTDTEQEFVSSVLPGSQSSSANFAQQLHRKSIL
KKKRVQKVHARPKTEDADVVEAIEQLSHCKIDTQEEIHACSVHNEVTAPPSNNTALGKSS
ASEICVNTCGSQIVFLGVSKRGAEHLKRTLAKSTEHKNPELRHPVNSKGSLLEVLRQTLM
EWRTEETLKFLYGPNYTSLCSSECIVSANQESEELDEDDLDTADDLNTIAVEESENSLNY
SLPFTGSGGILKPVPSYEKLKEETEFLEVRVKEFYEGKYILAEEAATQAQAGEHPSGDKD
DQQEDLTFPLVDSNAQMQIRKRIVLEKLTKAVSAVLGPLQIASGDVYTELKSLVKTFRLT
NRNIIHKMPEWTLIAIVLLSVLSQVTPLCKNTQTSPMYTQFLTTLLEELHFKNEDLESLT
RIFRMD
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgatggcggccgggacgggcaagccccgccggcggcgcgcaggaaataagcat
tcagctgctctgaaaaatgaagatgctgctcaaaggaaagcagctctggaggctgcactg
agaaagaagattgaatttgagaaaaaagcattgtctattgttgaacagctcctggaagag
gacattactgaagagttccttctaaactgtggaaaatgtattactccatctcactataaa
gacatcgttgatgaacggtctatcatcaagctatgtggttatcctctatgtcacaataaa
ctggaaaatgtgccaaagcagaagtacagaatttcaacaaaaacaaaccgagtttatgat
atcactgaaagaaagtgcttttgcagcaacttttgctatagagcatctaagtattttgaa
gctcaaatttccaaaagtccggtatggatgagagaagaagacaaaccaccagacatagag
ctgctgaaggagggacagagtgggcagtctggagaagaggtaaaactacgtgatgaagta
attaaagcatccgacattgaaaatcctagcatatcttcagatccatgtgaatctgcttct
catgacacagccagtgacagcagtactgatactgaacaagaatttgtttcttctgtccta
ccaggaagtcagtcaagttcagccaattttgcacagcaattgcacagaaaaagcatcctc
aaaaagaagcgtgttcagaaggtccatgccaggcctaaaactgaagatgcagatgtggta
gaagccattgaacaactctctcattgtaaaatagacactcaggaagaaatacatgcttgc
tctgttcataatgaagtaactgcaccaccttcaaacaatactgctcttgggaaatcaagt
gcttcagaaatctgtgtaaatacgtgtggatcacagatagtttttctaggtgtgagcaaa
agaggagcagaacatcttaaaagaacactagctaagtcaacagaacataaaaaccctgaa
ctgaggcatccagttaattccaaaggcagtttattagaagtgcttaggcaaacacttatg
gaatggagaactgaggaaactttaaaatttctctatggcccgaactatacttctttgtgt
tcatcagagtgcatagtatctgccaaccaggagtctgaagaacttgatgaggatgactta
gatacagctgatgatctcaacactattgctgtagaggagtctgaaaacagcttgaattac
tctttacctttcacaggctcaggtggaatacttaagcctgttcctagttatgaaaagtta
aaagaagaaacagagttcttagaagtccgagtaaaagagttctatgaaggaaagtacatc
ttggctgaagaggcagcgacacaagcacaggcaggggaacatcccagcggagacaaagat
gatcagcaggaagatctcaccttcccacttgttgattcaaatgcacaaatgcagattagg
aagcgaattgtccttgaaaaattgacgaaagcagtatctgcagttttgggccctcttcag
attgcttcaggcgatgtttatacagagctaaaaagtcttgtcaaaactttccggttaaca
aacagaaatattattcacaaaatgcctgaatggactctaattgctattgttttgctatct
gtattgtcacaagttactccactttgcaagaatactcagacgagcccaatgtacacacag
ttcctgaccacattactggaagaactgcatttcaaaaatgaagatctggaaagtttaaca
agaatatttagaatggactga
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