Corvus cornix (hooded crow): 104695571
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Entry
104695571 CDS
T03546
Symbol
TRMT13
Name
(RefSeq) tRNA:m(4)X modification enzyme TRM13 homolog
KO
K15446
tRNA:m4X modification enzyme [EC:
2.1.1.225
]
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ccw03016
]
104695571 (TRMT13)
Enzymes [BR:
ccw01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.225 tRNA:m4X modification enzyme
104695571 (TRMT13)
Transfer RNA biogenesis [BR:
ccw03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
104695571 (TRMT13)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRM13
zf-TRM13_CCCH
zf-U11-48K
Methyltransf_32
OrgC
DUF7077
Motif
Other DBs
NCBI-GeneID:
104695571
NCBI-ProteinID:
XP_039412359
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All DBs
Position
8:19205695..19213153
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AA seq
529 aa
AA seq
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MARSPSEERKEAPARPARTHRSSQPQPRTRTDTARSKMRSAAILLPPAGRGRNMAARGPS
GAAMAAPEPQPGRCAYFVLRKRRFCRMIPAPGRRFCGEHGHEEEQNDRKRIPCPLDPKHT
VYEDQLQKHLKKCNSREKPRPVYFVQDINAGLKDVAEIPEKQVPLSSLSIEELQNLIIKL
KKASNGLELHLKEQILSHQALQEALNDPKNGESAFKHLKQQASILGNMEKLHLLGPGRCF
VEFGAGRGKLSHWVDVALQNVESVQFLLVERATTRFKVDGKHKRRDSIFERLQVDIQHLC
LNKVPILEKKKLPVVGIGKHLCGAATDLALRCLVESYTTCCDGGDEEPAPKRSRAAQTEV
APQRSAGNESTTEDHKPVAGIVIALCCHHKCDWTHYVGREFFKSVGLGPVEFHYFQRMSS
WATCGMRETTSKASTSEDSEDQTDDTEEHEQTLSRTESGSDTLQGILSAEERKEIGCLCK
RLIDHGRIEYLQQQGYKAALQYYTESAVSLENVLLTAVPSPSLIPEPTI
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcagcccctctgaggagcgcaaagaggctcctgcacggccggcccgcactcac
cgctcctcgcagccgcagccccgcactcgcaccgacaccgcccggtcgaagatgcgctcc
gccgccatcttgctcccgcccgcggggaggggccgcaacatggcggcgcgggggccgtcg
ggagcggcaatggcggcgccggagccgcagccggggcgctgcgcttacttcgtgctgagg
aagaggcgcttctgcaggatgattccggcgcccggcaggcgcttctgcggagagcacggc
cacgaggaggaacaaaatgacagaaaaagaattccgtgccctcttgatccaaaacacact
gtatatgaagatcaactacaaaagcatttaaaaaaatgtaactcaagagagaagccaagg
cccgtctactttgttcaagatattaatgctggtttaaaagatgttgcagaaataccagaa
aaacaagttcctctatcttctctctctatcgaagagctgcagaacttaattatcaagttg
aaaaaagcaagtaatggcctggaacttcatcttaaggaacaaatactgtcccaccaggct
ttacaagaagccttaaatgacccaaagaacggggaatctgctttcaaacacctgaaacaa
caggcttctattttaggtaacatggaaaaattgcatttacttggtccaggaaggtgtttt
gttgagtttggagctgggcgaggaaagctgtctcattgggttgatgttgccttacagaat
gttgaaagtgttcagtttttgcttgtggaaagggcaaccacaagattcaaggtggatgga
aaacataaaaggagagattctatatttgagagacttcaagtagacattcagcacttatgt
ttaaataaggtacctattttggagaagaaaaaactaccagtggtaggaattgggaagcat
ttgtgtggtgctgcaacagatcttgctttgagatgcttggttgaaagttacaccacttgc
tgtgatgggggagatgaagagcctgcaccaaaacgctccagggctgctcagacagaggtg
gctcctcagagatctgctggtaatgaaagcaccacagaggaccataagcctgtagctgga
attgttattgctctgtgttgccatcacaagtgtgactggacacattatgtaggcagagag
ttctttaaatcagtaggactgggaccagtggaatttcattattttcagagaatgagtagt
tgggccacttgtggcatgcgagaaaccacaagcaaagcttctacaagtgaagacagtgaa
gatcaaactgatgacacagaagaacatgagcaaacactcagcaggacagaaagtggttca
gatactttacaagggatactgagtgctgaggaacgaaaggagatcggctgcctctgtaaa
cggctgattgatcatggccggattgagtatttacaacaacaaggatacaaggctgcacta
cagtattacacagagtctgctgtgtccttggagaatgtgctgttgacagctgtcccaagt
ccttctttgataccagagccaactatatga
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