KEGG   Corvus cornix (hooded crow): 104695735
Entry
104695735         CDS       T03546                                 
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
  KO
K03512  DNA polymerase lambda [EC:2.7.7.7 4.2.99.-]
Organism
ccw  Corvus cornix (hooded crow)
Pathway
ccw03410  Base excision repair
ccw03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:ccw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    104695735 (POLL)
   03450 Non-homologous end-joining
    104695735 (POLL)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:ccw03400]
    104695735 (POLL)
Enzymes [BR:ccw01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     104695735 (POLL)
DNA repair and recombination proteins [BR:ccw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     104695735 (POLL)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    X-family DNA polymerases
     104695735 (POLL)
SSDB
Motif
Pfam: DNA_pol_B_palm DNA_pol_B_thumb DNA_pol_lambd_f HHH_8 BRCT BRCT_2 HHH_5 LIG3_BRCT NTP_transf_2 HHH PTCB-BRCT zf-LYAR
Other DBs
NCBI-GeneID: 104695735
NCBI-ProteinID: XP_010408018
LinkDB
Position
6:complement(13400033..13411618)
AA seq 579 aa
MEPRGIVKAFPKRKKVRDDSGKSIPPKILKEEGTEIPEAEWLKPVIAYVLQAGIGQARAE
IFHRQIVQNGGVVHSQLSLEVTHVIVAEDMDCDRAFRLLKLTKLRPGLQLVKASWLSACI
RDQKLLSTAGYGVFMPPRYLEEGEFQKEQQQILDRVKIQPPAETGAVKPNTESQVEHSSQ
QGLGTLGQQQLAEKYSDDEDSEGEDAGVTQGDLEALISGLYPVKSSEEISDSSYTVAQPP
SKWVCAQSSNTKKENHNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSYHKPVTSY
QEACKIPGIGKRMAEKILEILESGHLRKLDHISERVPVLELFSNIWGAGVKTAQMWYQQG
FRTLDDIRTKATLTSQQAVGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLVCVACG
SYRRGKATCGDVDVLVTHPDGQSHRGVFNKLLDSLHRSGFLTDDLVSQEDNGDQKKYLGV
CRLPGPAQRHRRLDIIVVPYQEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSSAV
VRGPGGAKVSSGHTLPTPTERDVFIQLGLPYREPSERDW
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggagccacgagggattgtcaaagcctttcccaagaggaagaaggtgagggatgattcg
gggaaaagcatccctccaaagatcctgaaagaggaaggaacagaaatacctgaggcagag
tggctgaaaccagtcatcgcctacgtgttgcaagccggcattggccaggccagggccgag
atcttccacaggcagattgtccagaacgggggtgtcgtacacagccagctctccttggag
gtgacgcacgtcattgtggctgaggacatggactgcgatcgcgcctttcggctcctcaag
ttaaccaagctgcgcccggggctgcagctggtgaaggcatcctggctgagtgcttgcatt
agagaccagaagctgctgagtactgctggctatggtgtctttatgcctcccaggtacctg
gaggagggagagttccagaaagaacagcagcagatcctggacagagtaaaaatccagccc
ccagcagagacgggagcagtgaaaccaaatactgaatcacaggtggaacattcctcacag
caaggcttgggcacccttggacagcagcaactggctgagaaatactctgatgatgaagac
agtgaaggagaagatgctggtgtcacccagggagatctggaagcattgatttctggcctc
taccctgtgaaatcatcagaggagatcagtgacagctcttacacagtggcccagcctccc
agcaagtgggtttgtgcccagtcttccaacaccaagaaggaaaatcacaaccaatgcatc
acagagaagctggaagtgctggcaaaggcttactctgtccagggagacaagtggagagct
ctgggctactccaaagcaatcaacgcgctcaagagctaccacaaaccagtcacctcctac
caggaagcctgtaaaatccctgggattgggaagcggatggcagagaagatcctggagatc
ttggagagtgggcacctgcgcaagctggatcacatcagtgagagagtgcctgtgctggag
ttattttccaacatctggggagcaggggtcaagacagctcagatgtggtaccagcagggt
ttccggacactggatgacatccgcaccaaggccactctgaccagccagcaggctgtggga
ctgaagcactacacggatttcctggagcgcatgcctcgggaggaagctgcagaaatagag
cagactgtcagacaagctgccctggccctgaagcctggcctcgtgtgtgtggcctgtggc
tcctaccgtcggggaaaggccacctgtggagatgtggatgtgctggtcactcacccggat
gggcagtctcaccgtggggtgttcaacaagctgctcgacagcctccacaggagcggcttc
cttacagatgacctggtgagtcaggaggacaatggtgatcagaagaagtacctgggcgtg
tgccgcctgcccgggccagcgcagcgtcaccgccgcctcgacatcatcgtggtgccatac
caggagttcgcctgtgccctgctctacttcacgggctcggctcacttcaaccgctccatg
cgcgccctggccaagaccaagggcatgagcctgtcggagcacgcgctcagctcggccgtg
gtgcgaggccctgggggtgccaaggtgtcgtctggccacactctgcccactcccactgag
agagatgtcttcattcagctggggctgccctaccgggagccctcggaacgagactggtga

DBGET integrated database retrieval system