Corvus cornix (hooded crow): 104695735
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Entry
104695735 CDS
T03546
Symbol
POLL
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03410
Base excision repair
ccw03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
104695735 (POLL)
03450 Non-homologous end-joining
104695735 (POLL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104695735 (POLL)
Enzymes [BR:
ccw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
104695735 (POLL)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
104695735 (POLL)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
104695735 (POLL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
BRCT
BRCT_2
HHH_5
LIG3_BRCT
NTP_transf_2
HHH
PTCB-BRCT
zf-LYAR
Motif
Other DBs
NCBI-GeneID:
104695735
NCBI-ProteinID:
XP_010408018
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All DBs
Position
6:complement(13400033..13411618)
Genome browser
AA seq
579 aa
AA seq
DB search
MEPRGIVKAFPKRKKVRDDSGKSIPPKILKEEGTEIPEAEWLKPVIAYVLQAGIGQARAE
IFHRQIVQNGGVVHSQLSLEVTHVIVAEDMDCDRAFRLLKLTKLRPGLQLVKASWLSACI
RDQKLLSTAGYGVFMPPRYLEEGEFQKEQQQILDRVKIQPPAETGAVKPNTESQVEHSSQ
QGLGTLGQQQLAEKYSDDEDSEGEDAGVTQGDLEALISGLYPVKSSEEISDSSYTVAQPP
SKWVCAQSSNTKKENHNQCITEKLEVLAKAYSVQGDKWRALGYSKAINALKSYHKPVTSY
QEACKIPGIGKRMAEKILEILESGHLRKLDHISERVPVLELFSNIWGAGVKTAQMWYQQG
FRTLDDIRTKATLTSQQAVGLKHYTDFLERMPREEAAEIEQTVRQAALALKPGLVCVACG
SYRRGKATCGDVDVLVTHPDGQSHRGVFNKLLDSLHRSGFLTDDLVSQEDNGDQKKYLGV
CRLPGPAQRHRRLDIIVVPYQEFACALLYFTGSAHFNRSMRALAKTKGMSLSEHALSSAV
VRGPGGAKVSSGHTLPTPTERDVFIQLGLPYREPSERDW
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggagccacgagggattgtcaaagcctttcccaagaggaagaaggtgagggatgattcg
gggaaaagcatccctccaaagatcctgaaagaggaaggaacagaaatacctgaggcagag
tggctgaaaccagtcatcgcctacgtgttgcaagccggcattggccaggccagggccgag
atcttccacaggcagattgtccagaacgggggtgtcgtacacagccagctctccttggag
gtgacgcacgtcattgtggctgaggacatggactgcgatcgcgcctttcggctcctcaag
ttaaccaagctgcgcccggggctgcagctggtgaaggcatcctggctgagtgcttgcatt
agagaccagaagctgctgagtactgctggctatggtgtctttatgcctcccaggtacctg
gaggagggagagttccagaaagaacagcagcagatcctggacagagtaaaaatccagccc
ccagcagagacgggagcagtgaaaccaaatactgaatcacaggtggaacattcctcacag
caaggcttgggcacccttggacagcagcaactggctgagaaatactctgatgatgaagac
agtgaaggagaagatgctggtgtcacccagggagatctggaagcattgatttctggcctc
taccctgtgaaatcatcagaggagatcagtgacagctcttacacagtggcccagcctccc
agcaagtgggtttgtgcccagtcttccaacaccaagaaggaaaatcacaaccaatgcatc
acagagaagctggaagtgctggcaaaggcttactctgtccagggagacaagtggagagct
ctgggctactccaaagcaatcaacgcgctcaagagctaccacaaaccagtcacctcctac
caggaagcctgtaaaatccctgggattgggaagcggatggcagagaagatcctggagatc
ttggagagtgggcacctgcgcaagctggatcacatcagtgagagagtgcctgtgctggag
ttattttccaacatctggggagcaggggtcaagacagctcagatgtggtaccagcagggt
ttccggacactggatgacatccgcaccaaggccactctgaccagccagcaggctgtggga
ctgaagcactacacggatttcctggagcgcatgcctcgggaggaagctgcagaaatagag
cagactgtcagacaagctgccctggccctgaagcctggcctcgtgtgtgtggcctgtggc
tcctaccgtcggggaaaggccacctgtggagatgtggatgtgctggtcactcacccggat
gggcagtctcaccgtggggtgttcaacaagctgctcgacagcctccacaggagcggcttc
cttacagatgacctggtgagtcaggaggacaatggtgatcagaagaagtacctgggcgtg
tgccgcctgcccgggccagcgcagcgtcaccgccgcctcgacatcatcgtggtgccatac
caggagttcgcctgtgccctgctctacttcacgggctcggctcacttcaaccgctccatg
cgcgccctggccaagaccaagggcatgagcctgtcggagcacgcgctcagctcggccgtg
gtgcgaggccctgggggtgccaaggtgtcgtctggccacactctgcccactcccactgag
agagatgtcttcattcagctggggctgccctaccgggagccctcggaacgagactggtga
DBGET
integrated database retrieval system