Corvus cornix (hooded crow): 104695803
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Entry
104695803 CDS
T03546
Symbol
RNF43
Name
(RefSeq) LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase RNF43
KO
K15694
E3 ubiquitin-protein ligase RNF43 [EC:
2.3.2.27
]
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
104695803 (RNF43)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104695803 (RNF43)
Enzymes [BR:
ccw01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
104695803 (RNF43)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
104695803 (RNF43)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZNRF_3_ecto
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
KIAA1549
zf-C3HC4_3
DUF2254
Motif
Other DBs
NCBI-GeneID:
104695803
NCBI-ProteinID:
XP_039418906
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Position
19:complement(459562..520486)
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AA seq
831 aa
AA seq
DB search
MSAGPQVQLALLWPWLLMATLQAGLGQTGLALAAAVESERAAAQKAIIRVIPLKVEPIIL
EGEFANVAEVTPAEGKLLQSHPLSLCNTSEDEHTESGFITIVKLEQPDRDPNPCLSLANK
AKLAGERGARAILFDITDDESAADQLRKPRGLSQPVVLIRGHDAELLMGVVNKNREAHVK
IEVKEPPAWPDYDVWILLTVVSTVVVIILIFVVRTKCQLNRTQDSVQQQTLQAIGQLATR
RYQPRARPAPRWDSASSCSSAPVCAICLEEFSEGQELRIISCSHEFHRECVDPWLQQHHT
CPLCMFNILARDSGEQATAASSRLVPQDMEPGRRLHLFRQHPGHALYHLPHAYPQRNLRS
FLPEPAPGNPFFHSPELSQLDFGTIHYMPYRPTTSLLACGHVAPLAPGLLGQQHPNPSAC
GQALAPHRTCPLQPQPPCLAPKAALAQKQHRASALRRGLGHGHQHNSSGSGESYLTEHSG
YLADGPGSDSSSGPCHGSSSDSMLNCTDVSLQGIHGSCSTFRSSLSSDYDPFVYCSSEGP
ATDHGQEQLRPPRERRPRSLDLMVPRSAAPAKPQVLSHVHYHHHQHHHYRRDSECPPGRA
GQGPGPRKSRYSGAKVAFHSARTQKRTEKSHHSQQPLESSAVLQEAAPAGQPACPQEGWK
APHSPSTSPSRLDFSVDANRQSGAAGTPPVPLPPRYSLQSRHHRRKRKCPLEPDPALLPK
DSAEPRACDTHLPPGHPAGYRCSPEAQPXIPSAALPSGSRPLWKCLVPQSSSEPRKQEEG
LSGREGNRSVPADFSGTGTPRHSLSVRLHCPSQQGGPASEEEVQDVHEHSV
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctggcccccaggtgcagctggctctcctctggccttggctgctcatggcgacc
ctgcaggcaggactgggccagaccgggctggcgctggcggcggccgtggagtcggagcgg
gcggcggcgcagaaagccatcatcagggtcatccccctcaaagtggaacccatcatcctg
gaaggggagttcgccaacgtcgccgaggtgactccggccgaagggaagctgctccagtcc
cacccgctatccctgtgcaacaccagcgaggatgaacacacggaatcgggattcatcacc
atcgtcaagctggaacagccggatcgggatcccaacccctgcctatccctggctaacaag
gcgaagctggcgggggagcgtggagcccgtgcgatccttttcgatatcaccgacgatgaa
agtgctgctgatcagctgaggaagcccagaggcctgagccagcccgtggtcctgatcagg
ggccacgatgctgagctcctcatgggcgtcgtgaacaagaacagagaggcccacgtgaag
atagaggtcaaggagccaccagcttggccagactacgacgtgtggattcttctcacggtg
gtcagcactgtggttgtcatcattctgatttttgttgtccgcacaaagtgccagctgaac
aggactcaggactcggtgcagcagcagaccctgcaggccatcgggcaattggccacacgc
cgctaccagccccgggcccggccggccccgcgctgggactcggccagcagctgcagctcc
gccccggtctgtgccatctgcctcgaggagttcagcgaggggcaggaactgcggatcatc
tcgtgctcccacgagttccatcgggagtgtgttgacccttggctgcagcaacaccacaca
tgtccactttgcatgttcaatattcttgccagagactcgggggagcaggccacggctgcc
agctccaggctggtccctcaggacatggagcctggacggcgactccaccttttccgccag
catccaggacatgccctttaccacctcccacacgcgtatcctcagaggaacctcaggagc
tttctcccagagccagcccccggcaaccccttcttccactctccagagctctcccagctg
gattttggcaccatccactacatgccctacagaccaaccacctccctgctggcctgcggc
cacgtggccccgctggccccgggcttgctggggcagcagcaccccaacccctctgcatgc
gggcaggcgctggcaccccacaggacgtgtccccttcagccccagcccccctgcctggcg
cccaaggcagccctagcacagaagcagcaccgtgcatccgccctgcgccgtgggcttggc
cacgggcaccagcacaacagcagcggctccggggagagctatctcacggagcacagcggg
tacctggctgacgggccgggcagcgactccagctcggggccctgccacggctcctccagt
gactccatgttgaactgcacggacgtcagcctgcagggcatccacggcagctgctccacc
ttccgcagctccctcagcagcgactacgatcccttcgtgtactgcagctccgagggcccc
gccacggaccacggccaggagcagctgcggccgcccagggagaggcggccccgctccttg
gacctgatggtgcccaggagtgccgctccggccaagccccaggtgctcagccatgtccac
taccaccaccaccagcaccaccactacagacgggactcggagtgtcctcctggccgggct
gggcaggggccggggccacgcaaatcccgatactctggggccaaggttgccttccacagt
gctcggacacaaaagaggactgagaaaagccatcactctcagcagcctctggaaagcagt
gctgtgctgcaggaggcagctccagcaggacagccagcctgtccccaggaaggctggaag
gcccctcactccccctctacttctccaagcaggttggacttcagtgtagatgccaacaga
caatcgggagcagctggcacaccccctgtcccactgccccccagatacagcttacagagc
aggcatcaccgaaggaaaagaaagtgtcccctggagcccgaccccgctctcctgcccaag
gactcagccgagcccagagcctgcgacactcaccttcctcccggccatcctgctggctac
cgctgctctcccgaagcccagcccntgatcccaagcgctgccctgcccagcggctcccgg
ccgctctggaagtgtttagtgccacagtccagctccgagccgaggaagcaggaggagggg
ttgtcaggacgggagggaaaccgctcagttcctgcagatttctcagggacgggcaccccc
agacacagtctgagtgtccgccttcactgcccatctcagcagggtggtccggcatctgaa
gaggaggtccaggatgtccacgaacactcagtttaa
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