Corvus cornix (hooded crow): 104695804
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Entry
104695804 CDS
T03546
Symbol
LCOR
Name
(RefSeq) ligand-dependent corepressor isoform X1
KO
K26260
ligand-dependent corepressor
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
104695804 (LCOR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104695804 (LCOR)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
104695804 (LCOR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF4553
Trp_halogenase
Motif
Other DBs
NCBI-GeneID:
104695804
NCBI-ProteinID:
XP_039409928
LinkDB
All DBs
Position
6:13813423..13898281
Genome browser
AA seq
1748 aa
AA seq
DB search
MASPCGRQQCSIQRRGVRHQLDSWRHKLIHCVGFESILEGLFGPGLLKDLSLFKDCEPEG
VSDWSFDENCLFCCLRREKVKEHLVSLDEPASEAGQEALLRQEQAKIIRFERQAEEFLNA
VFYRKDSPRVSDPNIPLVAREIMQRMIRQFAAEYTSKNSSTQDSSQPNSTKNQSLLKASL
VASSPTAATAQNPVLSKLLMADQDSPLDLTVRKSQSEPSEQDGVLDLSTKKSPCAGSTSL
SHSPGCSSTSGNGEDAAETIAIDSNNQPKSPLEKFMVRLCTHHQKQFIRVLNDIYTEVQP
DSDSQQLSESEIMEASTCGSGCSQRSTENQDKGATCTESKLPSTLDPGQSGSDGPLYVTG
QALKQPVELKSLDRAENSSPALRRDFCELPITRLRSASPKDSPTQEYLSTLNSSSLNFHH
AAKTLEGQQAAGHEQEAGIRKCEDNKEQLAGKTLMEGYISVKVANVNGSEDSLDSCLGSQ
KSSFRALPEESWDPGFAVTPPRRADKENTLQCSSKASLHQDLDAKEQDVRPKQENHLHAV
AKGKAGCHLHPADKGTLDKSKEGWLPTGAMPAAHRTPSGHPRAKTASLRSSRKSKKTSGL
RINDYDNQCDVVYISQPITECHFETQRLVPSRRTARKSTRGYYFNGECCELPTVRTLVKS
SRAEERVSSPALRTETLVSAKPPLVLSVEGSAGAGREGEKRVSLRLLAKVAPTSREMKER
AELGSMQLRDTRALRSREAAVAMPFFSLSAPPSPQKEDSLASSLPPGSPPADGGGMTAGG
TVTWEAGSSLGSSGDGSSSGQAADIAAFSVSKAHSEEEGCPGSDIQTVPDLSASPEPKSS
SQPSATTDTTPLPCDGARDPALLLSSGAAELCGQCLAEPSPCSPGLQAPGELPATMDGES
PLMPSATLQCGDVNKSIDAKPEAESSVMVGDGPLEQEDAVLVSTPLPKILELEAMQNNST
AGEKEPTEGEMPPDPNSSDSVPSKDSLDKKRKKGRRALVASDRCLRSQQSQSPAEGSAED
SGSSSSVQLPCLQIKFSKSPGAKRFKREVQLDEAASVHFPNDCFPNVLLKTSEGPGIGQA
PESIAEQQPGEENGVTTRQTYKSILAKETAAEGENYSKDDSSANSSQSQPGEMLEISIQA
DSEKKNILLPPENSVPANDAEQVDVKPVNASAKDEESSDSARDLDKPVNCELVTDLPPCP
SSRGGSKHLPAKTAKHKKVALQFYNLRHAPAPVDSAKKSTPGKESMQAIPKLREEHSSGN
DDCPALEDIDMADSKPKFMEWCAEEENQELIAEFNTQYMKIQKGWIQLEKEVQPTPKVKN
KADKLKEIWKSKKRTRKSRGSLDVQKLSPVQMLFMKAFKLSDICQWFLETTETRSLVIVK
KLNTRLPGEIPPLKVPMQKYSSSSLYPSSLQAERLKKHLKKFAATTPARNNLKNQKLWAK
IRENADKAEAEEATTPNQTSPTDASTKELSEDKTIQPALSLPTQASTRILRKYSNLRGKL
RAQQRMVKTEKQNDGPGDHLSLENKQSRKSVCINPLMSPKLALQIKAAAFPAKSPSVDGT
GKGRKGKSRSQEDSLPKVDLQLSKKKKMLKESRSTQERSSSSTKDKLPAKKATKIKHSEV
SAKAPATRKQAAMERSNKLARKMSLKEKKVPKKQLEKMRLPIRKGKENTSRRAVLPPSHE
ELSKCPKQKPLGESSTRSQKMANKKHSSGKTLTRSMKKMQENNVSQGKRKLRAKVDCSHS
KRSRLDPK
NT seq
5247 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcccgtgcgggcggcagcagtgctccatccagaggcgcggcgtccgccaccag
ctcgattcgtggcgacacaagctcattcactgtgtagggtttgaaagtattctagaaggc
ctgtttggacctggattattaaaagatctcagtttgtttaaagactgtgagcctgaaggt
gtttctgattggtcttttgatgaaaattgtcttttctgctgcctgagaagagaaaaagtg
aaggaacacttagtcagtctggatgagccagcctcggaagctggacaagaagctctgctt
agacaagagcaagcaaaaatcattcgttttgaaaggcaagcagaagagttcctcaatgca
gtcttttacagaaaagacagtcctagggtctctgaccccaatattcccctagtggcccgt
gagatcatgcagcgaatgatccgacagtttgctgctgaatatacctcaaaaaatagctct
actcaggactccagccagcccaatagcacaaagaaccaaagcctgctgaaagcatctctg
gtcgcctcctctcccacggctgcaactgctcagaaccctgtgctcagcaaactgctcatg
gctgaccaagactcacctctggaccttactgtcagaaagtctcagtcagaacctagtgaa
caagacggtgtgcttgatttatccactaagaagagtccttgcgctggcagcacttctctg
agtcactctccagggtgctccagtacttcgggaaatggtgaggatgcagcagagacaata
gcaatagactctaacaatcagccgaagtctccactggaaaaatttatggtcagactgtgt
acacatcaccagaagcagttcatccgtgtgctgaacgacatatacactgaagtacaacca
gactctgacagccagcagttgtctgaatctgagatcatggaggcctctacttgtggctct
ggttgtagccagcgaagcactgaaaatcaggataagggtgctacttgtactgaatcaaag
ctcccttctacattggacccaggacagtcagggtccgatggtcccctatatgttacagga
caagccctgaagcagccagtggaactgaagtctctggacagagcagagaactccagtcct
gctttgagaagggacttctgcgagctccccatcaccaggcttcgctctgctagtccaaag
gatagccccacccaagaatacctcagcacgttgaactcttcctctttgaatttccatcat
gccgcaaagaccctggaagggcagcaagctgctggacatgaacaagaagccggtatcagg
aagtgtgaggataataaagagcagctagcaggtaagactctcatggaaggttatatctca
gtcaaagtggcaaatgtgaatggcagcgaggacagcttagacagctgtctggggtcccaa
aagagctctttcagggctctgccagaggaatcctgggatcctggctttgcagtgaccccc
cctcgcagagccgacaaagagaacactttgcaatgcagctcgaaagcatctttgcaccag
gacttagacgcaaaagaacaagatgtgagaccaaagcaagaaaaccacctgcatgccgtg
gccaagggcaaggcaggctgccacctgcatccagccgacaagggcacactcgacaagtcc
aaagagggctggctgcccactggcgccatgccagctgctcaccggacccccagtgggcac
ccccgtgccaagacagcctccctcaggtcctctcggaagagcaagaagacatcggggttg
aggatcaatgactacgacaaccagtgtgatgtggtgtacatcagccagcccatcaccgag
tgccatttcgagacccagcggctggtgccgtcccgcaggacggcgaggaagagcacgcgg
gggtattacttcaacggggagtgctgtgagctccccactgtccgcacgctggttaagagc
tcccgggcggaggagagggtgagcagcccggcactgcgaacagagaccctcgtaagtgcg
aagccacccctggtgctgtcggtggaggggtctgcaggggcaggacgggagggtgagaag
agggtttccctgaggctcctggctaaagtggcaccaaccagtcgagaaatgaaagagaga
gctgagctgggctccatgcagctccgggatacccgagcacttcggtcgagggaagctgcc
gtggccatgccattcttctccctctctgctccacccagcccccagaaagaggacagctta
gccagctcactgccccctggctcccctcctgctgacggaggggggatgacagcaggaggc
actgtcacctgggaggctggcagtagcctgggctcctctggggatggcagcagcagtggg
caggctgctgatattgctgccttttcagtctcaaaagcacacagtgaggaggaaggttgt
ccaggctctgacatacaaactgttccagacctctctgccagcccagagccaaagtcctcc
tcacagccctctgccactacagacacaacacctctgccctgtgatggtgccagggatcct
gccctgcttctaagctcaggggctgctgagctctgtgggcagtgtctggcagagccctcc
ccatgctctccaggcttgcaggctcctggtgagctccctgccaccatggatggggagagc
cccctgatgccctctgctaccttgcagtgtggggatgtgaacaaaagcatcgatgctaaa
ccagaagccgaatcatcagtcatggtgggtgatggccctcttgagcaagaggatgctgtg
ctcgtcagcacacccctccccaaaatcttggaattggaggcaatgcagaataacagcaca
gcaggtgaaaaagagcccactgaaggggaaatgccacccgacccaaacagctcagactct
gtcccttccaaagacagtctagacaagaagcgaaagaaaggcaggagagcactagtggca
tcagaccggtgtctccgaagccaacaatcccagtcacctgccgagggcagtgctgaggac
tctggttcttccagctctgtgcagcttccttgccttcagatcaaattctccaagagccct
ggcgctaagcggttcaagagagaagtgcagctggatgaggcagcatctgtgcacttccca
aatgactgcttccccaatgtgctgctcaaaaccagtgaggggccaggcattggccaggct
ccagagagcatcgctgagcagcagccaggtgaggagaatggtgtcactaccagacaaacc
tataaaagcatcttagcaaaagagactgctgcagagggagaaaattactctaaagatgac
tcctctgctaacagcagccaaagtcaaccgggtgagatgctggaaatcagcatccaggct
gattctgagaagaaaaacattctcctccctccagagaacagtgttcctgcaaatgatgct
gagcaagtggatgtgaaaccagtcaatgccagtgcaaaggacgaggagagctctgacagt
gccagggatctggacaagccagtgaactgtgagctggtgactgatctgcctccatgtccc
agcagcagaggtggaagcaagcatcttccagcaaaaactgcaaagcataaaaaggttgct
ctgcagttttataacttacgacatgcacccgcacctgtagacagtgcaaaaaagagcaca
ccagggaaggagtctatgcaagcaatccccaaactgagggaagaacacagttcagggaat
gatgactgcccagcactggaggacatagacatggctgacagcaaaccaaagttcatggag
tggtgtgctgaagaggagaaccaggagctcattgctgagttcaacactcagtacatgaaa
atccagaagggctggattcagctggagaaggaggtccagccaacccccaaggttaagaac
aaagctgacaaactgaaagagatttggaaaagcaagaaaagaacacggaaaagcaggggc
tcactggacgtgcagaagctttctcctgtgcagatgctgtttatgaaggcttttaagctg
tctgacatatgccagtggtttctggagacaactgaaaccaggtctctagtgattgtgaag
aaactcaacacgcgtctcccaggggagattccccccctgaaagtccccatgcagaaatat
tcttcctctagtctctaccccagctcactacaagctgaacgtttgaaaaaacatctcaag
aagttcgccgccactaccccagctcggaataatctgaagaaccaaaagctttgggccaaa
attcgtgagaatgctgataaagcagaggctgaagaagccaccactcccaaccagacttct
cccactgatgccagcaccaaggagctgagtgaagacaaaaccatccagcctgccctcagc
ttgcccacgcaggccagcaccaggatcctgcgcaagtactccaatcttcggggcaagctg
cgagcccagcagcgcatggtgaagacagagaagcagaatgatggcccaggggaccatctg
tccctggagaacaagcagagccggaagagtgtgtgcatcaaccccctgatgtctccaaag
ttggccttgcagatcaaagctgctgcctttcctgctaaatctccctcagtggatgggacg
gggaaggggcggaaggggaagagcaggtcccaagaggactccttgcccaaagttgacctc
cagctcagcaagaagaagaagatgctgaaggagagcagaagcacccaggagcgatccagc
tcctccaccaaggacaagctgcctgccaagaaggctactaaaataaagcattcagaggtc
agtgcaaaagctcccgccacccgaaagcaggctgccatggagcggagcaataaactggcc
agaaaaatgtctttgaaagagaagaaagtcccgaaaaagcagctggagaagatgcggctc
cccataaggaagggcaaggagaacacgagcagacgggctgtgctgcctcccagtcacgag
gagctgtccaagtgccccaagcagaagcccctgggagagtcctccacacggtcacagaag
atggccaacaagaagcacagcagcgggaagaccctgacaaggtccatgaagaagatgcag
gagaacaatgtgtctcagggcaagaggaagctgagggcaaaagtggactgttcgcacagc
aaacgatcacgactggacccgaaatag
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integrated database retrieval system
