Corvus cornix (hooded crow): 104695868
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Entry
104695868 CDS
T03546
Symbol
LMO7
Name
(RefSeq) LIM domain only protein 7 isoform X11
KO
K06084
F-box protein 20
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
104695868 (LMO7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ccw04121
]
104695868 (LMO7)
Ubiquitin system [BR:
ccw04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
104695868 (LMO7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4757
PDZ
LIM
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
104695868
NCBI-ProteinID:
XP_019147729
LinkDB
All DBs
Position
1:67857654..67989734
Genome browser
AA seq
1524 aa
AA seq
DB search
MHDSHKDDRSYRRISVIEPKPTTDFNRFLPNKNKQTGYVPAPLRKKRTEKNEDNRRSWAS
PVFTESDGTFSSNQRRQRQLDTKEENKPRVNNPSQLSGYFDEDEEEVGIPNIEKDDLYFR
KLCSSAPNTVVAFDKFLPKFWTPEEELLWKKIKKSSFKPWYKEIQGFSRKRSDSEDEEFA
YKQSCTIPANQPRPGFDWNSSCRRDQNYKPTAEYVGSSLSQIAEGKILESSDQPSQFSLL
QALQKYTDYVSSEMETRIDPTSGPRLIKCRKNVSFIPGCKQGDEENGYLYPDLENDDLFV
RKTGAFHVNQVVLQDPRYLKKFSEQEPPLEGEIILQPREGQTVIPDLEKDDMIFRKVLSQ
KKEVPLSGAPDKYHPALFPDPWSLPEEIRSKFLCLLEKNAVPEERKSNGRVLSPSLQHKK
DDMLTRKIESWKVGSNVQPVNFIPGPCSEEDWKKWEAIREASKVRHKKRQMVERLFQKLS
DEQGSKSLNDVSAEELQTMRKIRYEELQKIKEQLQEQDLKWQEDLAKWKSRRKSYTSELQ
KKKEEREEIERRASEVSGRSTKSLKEMQQEREERDQDSYEQQKQEHNWAYSLNDDVFSEE
KAPSTVAKDWSAAKDYRLEEDTSYSTKDSKSVYATQPPKENLSESSAAREAPAPPDSLAE
EREQSPALLSTRYSVNAQTGSAQVSASLPRTYQKTDTSRLTSVVTPRPFGVHSRGISSLP
RSFTMDDAQKYNGEVEKAKRTQTLFTSISFSQPDTAHPLSSGAFRSRGEEEEEEKGAQST
PPPSLPLPLKSQDQDAGSSIPKPDIPPDSLSLASSAEIASPTEPKDSKSMEQYSEMRISI
NQRPGHSRSFGFTTNWSSSGAIVQTVEEGSPAALCQLHVDDEIIAVNGTKVSHMDYSQWE
EAISRALETGNLVMDVRRYGKNDWGKDLPSLPHVRHKILNLTSMGTNIIGTSENKWIDAT
SGEKVSNVSTVSTKRDFSSSLQSSDTETKLINGMQGDLGSNEQRASEPISLKNLKRRSQF
FEQGGPEPAMPDLPVPSISAPSRRVWDQEEERKRQEKWQKEQDRLLQEKYQREQEKLREE
WLRAKQEAEKESSKYFDEEQTVLTLNTTSVTSQAPPVSSWRASPEANTPEEREGDGGNEL
AAGLLHEEEGRRRLQEEGRIQEEATRHFEQEREQELELERRRKEREQQYAEEQRLQAEME
EQRQQAERQREVSVEVPQYQRHYERYEVSKTTEDRAGHPLIDRRYERYEVSKTIEEQPGQ
SFADRNKSKSTTELNEFNTIRNGTQSKYSERSWNMGESQKKSQKEQNLSAAELERQQILQ
EMRKKTSLHTDSSWIRQRSSSIHKEPVSLYSSSMRRGESLDNLDSPRMSSWRHHSWLNQS
ASSSSLSSSQDFSRPVSTSNRAYMCTPSSSKAPPVATSARAPSISQTAPRAQSPLSTSQS
GSQTRSRSVSGKKICSYCNNILGKGAAMIIESLGLCYHLPCFKCVACGCDLGGSRSGAEV
RIRNNKLFCNDCYIRFKTGQPTSM
NT seq
4575 nt
NT seq
+upstream
nt +downstream
nt
atgcatgactcccataaagatgacaggtcttaccgtaggatttctgtgattgaaccaaaa
cctaccactgacttcaatcgcttcttacccaacaaaaacaagcagacaggatatgtgcca
gcacctttaaggaagaagaggacagagaagaatgaggacaacaggaggagctgggcaagt
cccgtcttcactgagtcagatggaacattttcaagtaaccagaggaggcagaggcagttg
gatactaaagaggaaaacaaaccaagagttaacaatccttcacaattatctgggtatttt
gatgaggacgaggaagaagtaggcatcccaaacattgaaaaagatgatctctattttcgc
aagctatgttcttcagcaccaaatacagttgttgcttttgacaaatttcttcctaagttt
tggactccagaagaagaattgctatggaaaaaaatcaagaaatcctctttcaaaccctgg
tataaagagattcaagggttcagtagaaagagatcagattctgaggatgaggaatttgct
tacaaacaaagctgtaccattcctgctaatcaaccaagaccaggttttgactggaacagt
agctgcagaagggatcagaattataagccaactgctgaatatgtgggaagctcattgtca
cagattgcagaaggaaaaatcttggagtcttctgatcagcccagtcagttttcgttactt
caggccctgcaaaaatacactgactacgtgtcttccgaaatggagaccagaattgatcct
acttctggccctaggctcataaaatgtagaaagaatgtttcctttataccaggatgcaag
caaggagatgaggaaaatggttatttatatccagatttggaaaatgatgatttgttcgtt
cggaaaactggggctttccatgtgaatcaagttgttcttcaagacccccggtatttaaag
aaattctctgagcaggagcctcctctagagggtgagataattctgcaacccagagagggc
caaactgtgattccagacttggaaaaggatgacatgatttttcgtaaagtcctctctcag
aaaaaagaggtgcctttatcaggtgctcctgacaagtatcacccagcactgtttcctgat
ccatggagtcttccagaagagatccggtccaaatttctatgtttacttgaaaaaaacgca
gtaccagaggaaaggaagagcaatggcagagtgctgtcaccatctttacagcataagaag
gacgatatgctgacccgcaagattgaatcttggaaagtgggaagcaacgtccagccagta
aattttatcccaggtccatgcagtgaagaagactggaagaagtgggaagcaatcagggaa
gccagcaaagttagacacaagaaacggcagatggtggagagactgtttcaaaagctttct
gatgagcaagggagtaaatctttgaatgatgtcagtgcagaggagctgcagacaatgcgc
aaaatccgttatgaagagcttcaaaagataaaagaacagttacaagaacaagatctaaag
tggcaagaagatctagcaaaatggaagagtcgtagaaagagctacacttcagaattgcaa
aagaaaaaggaagagagagaagaaattgaaaggagagcttctgaggtatctggaaggagt
accaagtcactgaaagaaatgcagcaggagagggaagagagagatcaagactcctatgag
cagcagaaacaggaacacaactgggcatattccctgaatgatgatgtgttcagtgaagaa
aaagcaccttccacagtggcaaaagattggtcagcagccaaagattaccgtttggaagaa
gatacttcctacagcactaaggacagcaaaagtgtatacgccacccagccacccaaggag
aacctgtcggagagctcggctgctcgagaagctcctgcgccgccggacagcctggcggag
gagcgggagcagagcccggctcttttgtccactcgctactcagtgaatgctcaaactggg
tcagctcaggtttcagcttctctcccaagaacttaccagaaaactgatacctccaggtta
acatctgtggttacaccaagaccttttggtgtccactccagaggaatctcgtcacttcca
cggtcattcacgatggatgatgctcagaaatacaatggagaagtagaaaaagctaaaaga
actcaaactttgttcaccagcatttccttttcacaaccagacactgcacaccctctctcc
agtggtgcattcagaagcagaggtgaggaggaagaggaggaaaaaggtgctcagtcaaca
cctcctcctagtttgccattacctttaaagtcccaagaccaagatgctggaagcagtatt
cctaagccagacattcctcctgattctctttcacttgcatcttctgcagaaattgcgagt
ccaacagagcctaaggattccaaatccatggaacagtacagtgaaatgagaatcagtata
aaccagagacctggccacagtcgcagctttgggtttacaacaaattggagttcttcagga
gccattgtacagacagttgaagaaggcagccctgcggcactttgtcaactgcatgtagat
gatgagatcattgctgtcaacggcacaaaggtttctcatatggactacagtcagtgggaa
gaggccatcagcagagcactagaaactggaaacctagtcatggatgtcagacgatatgga
aagaacgactggggcaaagacctgccttccctgccacatgtaaggcataaaatcctcaat
ctcaccagtatgggtaccaacattataggtacatctgaaaataaatggattgatgcaact
tcaggagaaaaagtttcaaatgtttccaccgtatccacaaaaagagatttctccagcagc
cttcaaagttctgatacagaaacaaaattgataaacggaatgcaaggagatcttggctct
aatgaacaaagagcatctgaacctatttctttgaaaaacttaaaaagacggtcacaattt
tttgaacaaggaggcccagagcctgcaatgcctgatctcccagtcccatccatcagcgct
cctagtcgtcgggtttgggatcaagaggaagagcgaaaacgacaggaaaaatggcagaaa
gagcaggaccgtttattgcaggagaaataccaacgagagcaagagaaactgagggaagaa
tggctacgagctaagcaagaagcagaaaaagagagctccaagtattttgatgaggagcag
actgttctaaccctaaatacaacatccgtcacttctcaggctccacctgtgtccagctgg
agagcaagccctgaagcaaatactccagaggagcgagaaggagatggaggaaatgagctg
gcagcaggcttactgcatgaggaagaaggaaggagaaggcttcaggaggaagggaggatc
caggaagaagcaacccggcattttgagcaagaacgggaacaagagctggagcttgagaga
cgacgtaaagagagggagcagcaatatgctgaggagcagaggctacaggcagagatggag
gagcagaggcagcaggcagaaaggcagagggaggtgtcagtggaggtgcctcagtaccaa
agacattatgagcgctatgaagtatcaaaaacaacagaggatcgagctggccatcctctc
attgacaggcgttatgagcgttatgaagtttctaaaaccattgaggagcaacctggccag
tcatttgctgacaggaataagtcaaaatcaactacagaactgaatgaattcaacacaatc
agaaatggtacccagagcaagtattcagagaggtcctggaacatgggtgagtcgcagaag
aagtctcagaaggagcaaaacctgtctgcagcagagttggagagacagcaaatccttcag
gaaatgagaaagaaaacatccctgcacacggacagcagctggattaggcagcgcagttcc
agtatacataaggagcccgttagtctgtacagcagtagtatgaggagaggggagtctttg
gacaatcttgattctccaagaatgagctcgtggaggcaccactcatggctgaaccagtct
gcatcctcttcatctctgtcttctagtcaagattttagtcgcccggtgtccacttcaaac
cgggcctacatgtgcactccttcctccagcaaagcacctcctgtggccacctctgcgaga
gccccctccatatcccagacagctccccgggctcagtctcccctctctacttcccagtca
gggtcccagacacgcagcaggtcagtcagtgggaagaaaatctgttcatactgtaataac
attctgggcaaaggagcagccatgatcattgagtctcttggtctttgttatcatttacct
tgctttaagtgtgttgcctgtggatgtgacctcggtggatcccgctctggagctgaagtc
aggatccgaaacaacaaactcttctgcaacgactgctatatcagatttaaaactggacaa
ccaacctccatgtga
DBGET
integrated database retrieval system
