Corvus cornix (hooded crow): 104695870
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Entry
104695870 CDS
T03546
Symbol
MMS19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104695870 (MMS19)
03400 DNA repair and recombination proteins [BR:
ccw03400
]
104695870 (MMS19)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
104695870 (MMS19)
DNA repair and recombination proteins [BR:
ccw03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
104695870 (MMS19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
RIX1
Motif
Other DBs
NCBI-GeneID:
104695870
NCBI-ProteinID:
XP_039409899
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All DBs
Position
6:complement(14027627..14042923)
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AA seq
1026 aa
AA seq
DB search
MAAAGAGPGAGVEALAASVLDFVSGQQDGRGAEVAAGVKDGRWTVLQLVEALGFCLENTD
PRMRGRGIQLLSQVLLQCYSLLQEKEVLHLVLFYESRLQDHHLVIPSVLQGLRALSMCEV
LSPGLAVSVLKAIFQEVHVQSLMQLDRHTVYSIITNFMSTREEELKGLGADFTFGFIQVM
DGEKDPRNLLVAFQIVRDLIAKDYSLGPFVEELFEVTSCYFPVDFTPPPNDPHGIQREDL
ILSLRAVLASTPQFAEFLLPLLIEKLDSELQSAKLDSLQTLTACCAIYGQKELQEFLPSL
WSSLRREVFQTASEKIEAECLAALHALSACLSRSVLSSDSEDLLDSFLSSILQDCRHHLC
EPDMKLVWPSAKLLQAAAGASLRTYHRITRSVLPLLLEQYTKHTQSSQRRTILEMLLGFL
ELQQKWGHVEEDESTLLSLQDPVCSVVFSALTDPSVQLQLVGIKALTVLGSLQGFLSSSG
LELVVDHLIRLALHEEDSQSSEAAMEAAGSLAPTYPEVFSGRMVPRLEEELQSEREESYH
NHRSLQQRCLQALAAVSTHTSIVRDTVPVLLQHLQKVQKGTEARNTEDMVSVCQSLHRVA
LQCQQDVEGCWYFHQTVVPCLLAMAVQAAMQESTHTLPGKALLEEEVLAAMIPVISAATT
HLSPELAAQSVSHVVPLFLNGEVSFLPQNSFPCSFQPFGDGECLEAQRRLVALLMAFVCS
LPRDVAIPQQEWLLRELLALSCSCNCPFTATTAAKCFAGLVNKHPAGQQLDEILQLAVNR
MEPGLAEGPHRTQALTLLLWVTKALVLRYHPLSSCLTDKLLGLLGDTELGPTAADGFSLL
MAESPDVLHKGCHADVRIMFRQRFFTDNVPKLVQGFHGAGPDVKANYLKGLSHVLNHLPK
PVLVTELPTLLSLLLEALSCSDRVVQLSTLSCLHPLLLEAPQIMSLHVDTLVTKFLNLTS
SPTMAVRIAALRCAHALTSLPTTVLLPYKGRVIRALAKPLDDKKRLVRKEAVAARGEWFL
LGSPGR
NT seq
3081 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccggggccgggcccggggccggggtggaggctctcgccgcctccgtcctg
gacttcgtgtccgggcagcaggacggccgcggcgcggaggtggcggcaggggtgaaagat
ggaaggtggacagtgctgcagcttgtggaagccctggggttttgcctggagaacacagat
cctcggatgcgagggcgaggcatccagctgttgtcacaagtcctgctccagtgttactcc
ctgctccaggagaaggaagtgctgcatctggtcctgttctatgagagccggctgcaagat
catcacctggtgatcccctcggtgctccagggactgcgagcgctgagcatgtgcgaggtg
ctgtccccaggactagcagtgtctgtgctcaaagccatcttccaggaggtacatgtgcag
tccttgatgcagctggaccgccacacagtctacagcatcatcaccaacttcatgagcacc
agggaggaagagctgaagggcctgggtgccgacttcacctttggcttcatccaggtcatg
gatggggagaaggatccccgcaatctgctggtggccttccagatcgtgcgtgatctcatt
gccaaggactattctctgggtccctttgtggaagagctgtttgaagttacatcctgctac
ttccctgttgattttactccaccccccaatgatcctcatggcatccagagggaagacctg
atcctgagcctccgggctgtactggcctccacgccccaattcgctgagttccttctccct
ctgcttattgagaagttggactcagaactgcaaagtgccaagcttgactcgctgcagact
ctgactgcctgctgtgccatctacgggcagaaggagctgcaggaattcctccccagcctc
tggtcgtccctgcgcagagaggtgttccagacagcgagcgagaagattgaggcggaatgc
ctggctgcactgcatgctctctctgcctgcctctcccgctctgtgctcagctctgattct
gaggatctgctggattccttcctcagcagcatcctgcaagattgcaggcaccatctgtgc
gagcccgacatgaagctggtgtggcccagtgccaaactcttgcaggcagcagcaggtgcc
tccctccgcacctaccaccgcatcacccgcagtgtcctgcccctgctgctggagcagtac
accaagcacacgcagagcagccagaggaggacaatcctggaaatgctgctaggcttcctg
gagttgcagcagaagtggggacatgtggaagaagatgagagcactctgctgtcgctccaa
gacccagtttgctctgtggtgttctcggcgctgacggatcccagtgtacagctgcagctg
gttgggatcaaggcactgactgtcctgggctccctgcaaggcttcctgtcttcctctggt
ctggagctggttgtggatcacctcatccgtctcgctctgcatgaggaggattcccagagc
agtgaagcagcgatggaggcagctgggtccctggcccccacctacccagaggttttctct
ggacgcatggtacccaggcttgaagaggagctgcagtcagagcgggaagagagctaccac
aaccaccgctccttgcagcagcgctgcctgcaggccctggcagctgtgtccacccacacc
agcatcgtgagggatactgtgcctgtcctgctgcagcatctccagaaggtgcagaaaggg
accgaggccaggaacacagaagacatggtctccgtgtgccagagcctgcaccgcgtggcc
ctgcagtgccagcaggatgtggagggctgctggtacttccaccagacggtggtgccgtgc
ctgctggccatggctgtgcaggcagccatgcaagagagcacccatacactgccaggcaag
gcactgctggaggaagaggtgctggctgccatgatcccagtcatcagtgctgccaccacg
cacctgagccctgagctggctgcccagagtgtgtctcatgtggtgcccctctttctgaac
ggagaggtctccttcctaccccaaaacagttttccctgctccttccagcctttcggcgat
ggggagtgcttggaggcacagagacgcctggtcgccctcctcatggccttcgtctgctcc
ttgccccgcgatgtggcaatccctcagcaggaatggctgctccgggagctgctggcattg
agctgttcctgcaactgtcccttcacggccaccacagctgccaagtgctttgcaggactg
gtgaacaaacacccagcagggcagcagctggatgaaatcctgcagcttgcagtgaacagg
atggagcccggccttgcggaggggccccaccgaacgcaggcgctcaccttgctgctctgg
gtgaccaaagccctggtactgcgctaccaccccctgagctcctgcctgacagacaagctg
ctgggcctgctgggtgacacagagctgggccccactgcagccgatggcttctccctgctc
atggccgagtccccggatgtgctgcacaagggttgccatgctgacgtgcgcatcatgttc
cgccagcgcttcttcactgacaatgtccccaagctggtgcaaggcttccatggggctggc
cctgatgtgaaggcaaattacctgaagggtctgtcccatgtgctcaaccacctccccaaa
cctgtgctggtgacagagctgcccacgctgctttccctcctgcttgaggccttgtcctgc
tctgatcgtgtagtacagctctccacactgagctgcctccacccactgctgctcgaagct
ccccagatcatgagcctgcatgtcgacacactggtcaccaagttccttaacctcacctcc
agccccaccatggctgtccgcatcgccgccctgcgctgtgcccatgcgctcaccagtctg
cccacaacagtgctgctcccatacaagggccgagttatccgggcactggccaagcctttg
gatgacaaaaagaggctggtgcggaaggaagcagtggcagcacgtggggaatggttcctg
ctcgggagcccaggcaggtga
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