Corvus cornix (hooded crow): 104696024
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Entry
104696024 CDS
T03546
Symbol
SOX9
Name
(RefSeq) transcription factor SOX-9
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ccw03000
]
104696024 (SOX9)
Transcription factors [BR:
ccw03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
104696024 (SOX9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
104696024
NCBI-ProteinID:
XP_039418361
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All DBs
Position
18
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AA seq
481 aa
AA seq
DB search
MNLLDPFMKMTEEQDKCISDAPSPTMSDDSAGSPCPSGSGSDTENTRPQENTFPKGDPDL
KKENDEDKFPVCIREAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAAR
RKLADQYPHLHNAELSKTLGKLWRLLNESEKRPFVEEAERLRVQHKKDHPDYKYQPRRRK
SVKNGQAEQEEGSEQTHISPNAIFKALQADSPQSSSSISEVHSPGEHSGQSQGPPTPPTT
PKTDPQPGKQDLKREGRALGEGGRQPPHIDFRDVDIGELSSDVISNIETFDVNEFDQYLP
PNGHPGQPGQVTYTGSYGISGAAGTPAGAGHVWMSKQPPPAQPQPQLPALSAEQGPQQPQ
QPQQQRTHIKTEQLSPSHYSEQQQHSPQQLSYSSFNLQHYSSSYPSISRAQYEYGEHQGS
GSYYSHAAGQGSGLYSTFSYMNPSQRPMYTPIADTSGVPSIPQTHSPQHWEQPVYTQLTR
P
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgaccctttcatgaaaatgacagaagaacaggacaaatgtatctccgac
gcccccagccccaccatgtcggatgactccgccgggtccccctgcccctctggatccggc
tcggacacggagaacaccagaccccaagagaacaccttccccaagggggacccggacctg
aagaaggagaacgacgaggacaagttccccgtgtgcatccgggaggcggtgagccaggtg
ctgaagggctacgactggaccctggtgccgatgccggtgcgggtgaacggctccagcaag
aacaagccgcacgtcaagagacccatgaacgccttcatggtgtgggcgcaggcggcccgc
aggaagctggcggaccagtacccgcatctgcacaacgccgagctcagcaagaccctgggc
aaactctggaggctgctgaacgagagcgagaagcgtcccttcgtggaggaggccgagcgg
ctgcgggtgcagcacaagaaggaccaccccgactacaagtaccagccccggcggaggaag
tcggtgaagaacgggcaggcggagcaggaggagggctcggagcagacccacatctccccc
aacgccatcttcaaggcgctgcaggcagactcgccccagtcctcctccagcatcagcgag
gtgcactcgcccggggagcactcggggcagtcccagggcccccccacaccccccaccacc
cccaagacggacccgcagccaggcaagcaggacctgaagcgggagggccgcgcgctgggc
gagggcggccggcagccgccccacatcgacttccgcgacgtggacatcggcgagctgagc
agcgacgtcatctccaacatcgagaccttcgacgtcaacgagttcgaccagtacctgccg
cccaacgggcaccccggccagcccggccaggtcacctacacgggcagctacggcatcagc
ggcgccgcggggacgccggcgggcgccggccacgtgtggatgtccaagcagccgccgccg
gcgcagccccagccgcagctgccggcgctgagcgcggagcagggcccgcagcagccgcag
cagccgcagcagcagaggacgcacatcaagacggagcagctgagccccagccactacagc
gagcagcagcagcactccccgcagcagctgagctacagctccttcaacctgcagcactac
agctcgtcctaccccagcatcagccgcgcccagtacgagtacggcgagcaccagggctcg
ggctcctactacagccacgccgccggccagggcagcggcctctactccaccttcagctac
atgaacccctcgcagcgccccatgtacaccccgatcgcagacacgtcgggggtgccctcc
atcccccagacccacagcccgcagcactgggagcagcccgtctacacgcagctcacccgg
ccctaa
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