Corvus cornix (hooded crow): 104696026
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Entry
104696026 CDS
T03546
Name
(RefSeq) ATP-binding cassette sub-family A member 10-like isoform X1
KO
K05651
ATP-binding cassette, subfamily A (ABC1), member 9
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
104696026
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ccw02000
]
104696026
Transporters [BR:
ccw02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
104696026
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
SMC_N
Rad17
AAA_22
ABC2_membrane
Motif
Other DBs
NCBI-GeneID:
104696026
NCBI-ProteinID:
XP_019147862
LinkDB
All DBs
Position
18:complement(10116475..10137746)
Genome browser
AA seq
1632 aa
AA seq
DB search
MKTLQRSVSVFQQTKILLWKNVLVKWRMKMQSFQEWILSLLFLLLVFIASSFMVLVPYPE
VPYSHLGHLDDPAFNATGVTIMFTPGTATTRHIMNKVASSSVMTGIKLEELDDERAMEKA
WISNEETIGVVFKDNFSYQLRFPTSHVVIPNEVFGYIDSCYEFSPKYCNSPKYWYKGFLS
LQSSIDAAIIEMVANHSVWEEMKSIAGVRMKSQSILFSISLDYSYFMVVIVMCFFPFMYF
LSRNVTREKKKLKVLMRTMGLQDIAFWLSWSLLYSLYVLIFSCLLTALVLWEPFYTSSFP
AVSLLFFLYGLACIHLVFMLCSLLRTSKLVSSVGFLIIFIFGFLSLAVLIEDVPEPLKWF
LGLMCPFAFNTGIAKIFNLEKYGIGFSFSNLMEEAYFLFSTYVLLVFDSVLYMLLALYFD
KILPGKYGIPDPPLFCLKASYWKSRRGSTTDVPRSTANPEELLGDDVEPVPPEFLGKEAI
RLHNIKKAYKKKDKKTEALRGLSLNIYEGQITALLGHSGAGKTTLLNVLSGLSFPSEGSA
TIYNYRLSEMGDREEIRGMIGICPQFNTQFEVLTVKENLKTFAEIKGIKSKEVEREVQNI
LELLDISNIQDTQAEKLSGGQKRKLSIGIAMLGNPQVLLLDEPTAGLDPLSRHQVWSLLR
EQQAGRVILFSTQFMDEADILADRKAFISHGRLKCVGSSLFLKKKWGICYHLRIHVSESC
GLENVTSLVKRHIPNATFSGHSQYELRYKLPLENVNKFPDLFSGLDSCSEQGIINYGVSM
TTLEDVFLRLEGEATAIQEDEHIPGEEWAEAGPQCPDEARPGSLLLSDTRKASVQGLALW
RQQVSAMAQVHFLKLKSSVKTLQSILLLYGVFLLPLVLQLCMMAGLLSVSAWQLSPAQYF
LPLGRRSYLEPTTLLVYNHTGTGIDDFIHVLQSQDLTVEIAKEENITEELQHNGAIEVSR
EGQSYRFTVLCHLEAINCFPVLVNIISNTLLRTLNSTQHIQIWSHPFFSLFSPRYWDYFM
FVYFIYMLLLFPGFPPHFAMGYTQDCKTGARAQLRISGLFPSAYWCGQALVDIPLCWILL
FSMFGLQFAMSNKISGSASTFFLLVMGTLGYGISLVLLIYVISFNSRKGWSCDLWSFILI
VVCFISLFISRILDLVGSASTSLYVLSLLVPVYPLMGFVIDGQQIFLEDTETSRTAPDSD
VLFAVFAPYIHSVAFILLLRFLELRYGKAVLRQDPIFRISPRKESSQQHPKELEDEDEDV
RAEREAVRNAMVAPSQEEKSVIIVSNLCKEYKVKKAGSFLKKKKKKKKTATKNLSFCVKK
GEVLGLLGPNGAGKSTAIKMITGETALTAGQVLMKRGDGGGSQLQEQAPAFLGYCPQEDP
LWPDLTPQQHLRVYTAVKGLCKEDTAAAVDRIVNALQLQDYLNKKVRKLPAGITRKLCVA
LSVLGNPTVLLLDEPSTGMDPNGQRRVWKTIRDALKTKESGAVLTTHYMEEAEAVCDRVA
ILVAGQLRCIGSIQYLKNKFGKGYLLEIKVKDPESSDVLHAEILKIFPGAARQERFPSLL
VYKVPMKDALPLSQSFSKLEEAKRSCSLEEYSFSLNTLTQVFLELSREQEKDNFDLTLDG
TFDWKQLQQEDC
NT seq
4899 nt
NT seq
+upstream
nt +downstream
nt
atgaagacgctccagagaagtgtaagtgtattccagcaaactaaaattctcttgtggaaa
aatgtcctggtcaagtggaggatgaagatgcagagctttcaggagtggattctgtccctg
ctcttcctgctcctggtgttcatcgcgtcctcgttcatggtgctagtcccctaccccgaa
gtgccctacagtcacctggggcacctggatgaccctgccttcaatgccaccggggtcacc
atcatgttcacccccggtactgccaccacgaggcacatcatgaataaagtggcctccagc
tctgtcatgacaggtataaaattggaggaactggatgatgagagagccatggagaaagcc
tggatttcaaatgaggaaactataggggttgtatttaaggacaacttctcctaccaactc
aggtttcccactagccacgtggttattcccaatgaagtctttggatacatagacagctgc
tacgagttctcaccgaagtactgcaacagccccaagtactggtacaaaggcttcctgtcc
ctgcagtccagcattgatgctgctattatagagatggtggcaaatcattctgtttgggaa
gaaatgaaatccattgctggcgtccgaatgaagtcccagagcatcctcttctccatcagc
ctggactacagctatttcatggtcgttatcgtgatgtgcttctttcccttcatgtatttc
ttatcgaggaatgttacacgagaaaagaaaaagctcaaagtattgatgaggaccatgggg
ctgcaggacattgcattttggctctcctggagtttgctgtactctctttatgtgctgatc
ttctcgtgcctgctgacggccctcgtgctgtgggagcctttctacaccagcagcttccct
gcagtctcactcctgtttttcctctatggcctggcgtgtatccacctggttttcatgctc
tgctccctcttaaggacctccaagcttgtcagctccgtggggttcctcatcatctttatc
tttggattcctgagcctggcggtgctgatagaagatgtcccagagccactgaagtggttt
cttggtctcatgtgtccttttgcattcaacactggcattgccaagattttcaatttagag
aaatatggaataggtttctccttttccaaccttatggaggaagcatactttttattttca
acatacgtattgctggtgtttgactcagtcttgtacatgctgttggctctgtattttgac
aaaattctgccaggcaaatatgggattccagaccctcctctgttctgcctgaaggcttcg
tactggaagagcaggagaggctccaccacggacgtgcccagatccacagcgaaccctgag
gagctccttggggatgatgtagaacctgtgccccccgaattcctggggaaagaggccatc
aggctccacaatattaaaaaagcctataaaaagaaggacaagaagacagaagctttaaga
ggtttgtctttaaacatttatgagggtcagatcacggccttgctgggccacagtggggct
ggaaagacaacgctgctgaacgtgctcagtgggctcagcttcccttcagaaggctctgcc
accatatacaactacagactctccgaaatgggagacagggaggagatcagagggatgatc
gggatttgcccgcagttcaacacacagtttgaggtcttgacagtgaaagaaaacctgaaa
acttttgcagaaatcaagggcatcaagtccaaagaggtagagcgagaggtgcaaaacatt
ctggaactgctggatatcagcaacattcaagacactcaagctgagaaactgagtggtggg
cagaagaggaagttatccattggaatagccatgcttggaaacccccaggttttgctcctg
gatgagccaacggctgggctggatcctctctccaggcaccaggtgtggagcctcctgcgg
gagcagcaggcggggcgggtgatcctgttcagcacccagttcatggatgaggccgatatc
ctggcagaccgcaaggcttttatctcgcacgggaggctgaagtgcgttggctcttctctg
ttcctgaagaaaaaatgggggatttgctatcatttaaggatccacgtcagtgagtcttgt
ggcttagagaatgtgacatccctggtgaaaaggcacatccccaacgccacgttctcagga
cacagccagtatgaactgagatataaactgcctttagaaaacgtgaataaattcccagat
ctgttcagtggcctcgacagctgctctgagcagggaattataaactatggagtcagcatg
acgaccctggaggatgtgttcctaaggctggagggagaagccacagcgattcaagaagat
gagcacatccctggggaggagtgggcagaagcaggaccacaatgccccgacgaggcaagg
ccgggctccctgctgctctcggacaccaggaaggcgtcggtccagggcctggccctctgg
aggcagcaggtctctgccatggcacaggtgcacttcctcaagctcaagagctctgtgaag
accctgcagtcgattttgctgctctatggggtttttctgcttcctctggtgttgcaactg
tgcatgatggctggcttgctgagtgtgagtgcctggcagctctctcctgcacagtacttc
ttgcccctggggaggagatcctacctggagcccaccaccctgctggtctacaaccacaca
ggcacaggcattgatgacttcatccatgtgctccagagccaggatcttacagtggaaata
gcaaaggaggaaaatatcacagaggaactacaacacaacggggctatagaagtctcccgt
gaaggtcagagctacaggttcaccgtgctgtgccacttggaggccatcaactgcttccca
gtgctggtaaacatcatcagcaacaccctgctgagaaccctcaactccacccagcacatc
cagatctggagccacccattcttctctctgttcagtccacgatactgggattattttatg
ttcgtttacttcatttacatgctgctgttgttccctggttttcctcctcactttgcaatg
ggctacacacaggattgtaagacgggagctcgtgcccagctgcgcatctcggggctcttt
ccctcggcctactggtgtggtcaggcactggtggacatcccactctgctggatcctgctc
ttctctatgtttgggctccagtttgccatgagcaacaagatttctggcagcgccagcacc
ttcttcttgctggtcatggggacgttgggttatggaatttccctcgttctcttaatctac
gtgatctccttcaactctcgcaaaggatggagctgtgatctttggtcttttatcctgata
gtggtgtgctttatttctcttttcatcagcagaatcctggatctcgtgggcagcgccagc
acctccctctatgttttgtccctcttggttcccgtgtaccccctgatgggttttgtgatc
gatggccagcagattttcttggaggacactgagacatctcgtacagctccagacagtgat
gtgctgtttgctgtctttgcaccttacatccattctgtggctttcattcttcttcttcgc
tttttggagttaagatatggaaaagcagtgctgagacaggacccaatatttaggatttcc
ccaagaaaagaaagcagccagcagcaccccaaggagctcgaggacgaagatgaagatgtt
agagctgaaagggaagcagtgagaaatgccatggtggctccgagtcaggaggagaaatca
gtcattatagtcagcaatctgtgcaaggaatataaagtaaagaaagctggctcatttttg
aagaagaagaagaagaagaagaaaacagccaccaaaaacctttccttctgtgtaaaaaaa
ggagaagtgttaggacttctggggcccaacggagctgggaaaagcacagctatcaaaatg
atcactggagagacagccctgactgctgggcaggtgctgatgaagagaggagacggagga
ggctcccagctccaggagcaggcccctgcattcctgggatactgcccccaggaggacccc
ctctggccagacctcaccccgcagcagcacctgagggtctacacggccgtgaaggggctg
tgcaaggaggacacggctgctgctgtggacagaattgtgaatgctctgcagcttcaagat
tacttaaacaaaaaagtcagaaaattacctgctgggataaccaggaagctgtgtgtggcg
ctgtccgtgctgggcaaccccaccgtgctgctcctggatgagccctccaccggcatggat
cccaacgggcagcgccgtgtctggaaaacgattcgggatgccctgaaaaccaaggagtcg
ggagccgtcctgaccacgcactacatggaggaggcagaggccgtgtgtgaccgcgtggcc
atcctggtggccgggcagctccggtgcattggctcaatccagtacctgaagaacaagttt
ggcaaagggtatctcctggaaatcaaggtcaaggatccagagagctccgatgtcctgcat
gctgagattttgaagattttccctggtgcagcccgtcaggagaggttcccctctttgctt
gtctacaaggtcccaatgaaagatgcactgcccctgtcccagtccttctccaagctggag
gaagccaaacgaagctgcagcctcgaggagtacagcttctccttgaatactctgactcag
gtgtttctggagctctcccgagagcaggaaaaggataattttgatctgactttggatggg
acttttgactggaaacagctgcagcaggaggactgttaa
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