Corvus cornix (hooded crow): 104696049
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Entry
104696049 CDS
T03546
Symbol
LRRTM2
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 2 isoform X1
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
ccw
Corvus cornix (hooded crow)
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
104696049 (LRRTM2)
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_1
LRR_9
DHU1_N
Motif
Other DBs
NCBI-GeneID:
104696049
NCBI-ProteinID:
XP_010408454
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Position
13:12767003..12769848
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AA seq
517 aa
AA seq
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MGLHFKWPLGARMLAALYAMSMVLKMLPALGMACPPKCRCEKLLFYCDSQGFHSVPNTTE
KGSLGLSLRHNYISELERDQFASFSQLTWLHLDHNQIATVREDSFQGLYKLKELVLSSNK
IFHLPNTTFSQLLNLQNLDLSFNQLSSLHPELFYGLRKLQTLHLRSNSLRTIPVRLFWDC
RSLEFLDLSTNRLRSLARNGFAGLIKLRELHLEHNQLTKINFAHFLRLSSLHTLFLQWNK
ISNLTCGMEWTWGTLTKLDLTGNEIKAIDLTVFETMPNLKTLLMDNNKLTTLDSKILSSL
TSLTTVGLSGNLWECSPKICALATWLSGFQGRWEHSILCHSPDHTQGEDILDAVYGFQLC
WNLSTVVTPVATTSYTAPTTEYTKRISSSHFHVGDKEIPTTAGMVVTTEEQFPEPNNAIF
TQRVITGTMALLFSFFFIIFIVFISRKCCPPTLRRIRQCSMIQNHRQLRSQTRLHMANMS
DQGPYNEYEPTHEGPFIIINGYGQCKCQQLPYKECEV
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggcttacatttcaagtggccattaggggctcgtatgctggcagcactatatgcaatg
agtatggttttaaaaatgctgcctgccttgggcatggcttgtccaccaaaatgtcgctgt
gagaagctgctcttttactgtgactctcaggggtttcactcagtgccaaacaccactgaa
aagggctcgctaggtttgtcactgaggcacaattatatttctgaacttgaaagggatcaa
tttgcaagcttcagtcaacttacttggcttcacttagatcataatcaaattgcaacagtc
agagaagattcttttcaaggactgtataaacttaaggaattagtcttaagttccaacaaa
atctttcatttgccaaacacaacttttagccagctgcttaacctgcagaatttggacctc
tcttttaatcagttatcctctctgcaccccgagctcttctacggccttcgcaagctacag
accttgcacttgcgatccaactccctgcggaccatcccggtccgcctgttctgggactgt
cgtagcctggaattcctggatttgagcacaaaccgcttgcgaagtttggctcgcaatgga
tttgcgggattaatcaagctgagggagcttcacctagagcacaaccagctgacaaagatt
aattttgctcacttcctccggctgagcagcctgcacacgctcttcttgcagtggaacaaa
attagcaacttgacatgtgggatggagtggacctggggcaccttaacaaagcttgatttg
actggaaacgaaatcaaagccatcgacctcactgtctttgaaactatgcctaaccttaaa
accctcctcatggataacaacaagctcaccactctggattccaagatcctgagctcgctg
acatccctcaccaccgtgggcctctccggcaatctgtgggaatgcagcccaaagatctgc
gccttggccacatggttgagtggcttccaaggtcggtgggagcactccatcctctgccac
agccccgaccacacccagggagaggatattctggatgcagtgtatggttttcagctttgc
tggaatttatcgactgtggttacccccgtggctacgacgtcgtacacagctccaactacc
gagtacacgaaaagaataagctcttctcatttccatgtgggagacaaagagattccaact
acggcgggcatggtcgttaccaccgaagaacagttccctgagccaaacaatgccatcttc
actcagagggtaattacaggaacaatggctttattgttttctttcttttttatcattttt
atagtgttcatctccaggaagtgctgccctcccacactaagaagaattaggcagtgctca
atgattcaaaaccacaggcagctccgatcccaaacgcggctgcatatggccaatatgtca
gaccaaggaccctataacgagtacgaacccacccacgaaggacccttcatcatcatcaat
ggctacggacagtgcaagtgccagcagctgccctataaagaatgtgaagtataa
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