Corvus cornix (hooded crow): 104696087
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Entry
104696087 CDS
T03546
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
ccw
Corvus cornix (hooded crow)
Pathway
ccw04110
Cell cycle
ccw04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
ccw00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
104696087 (SMC1B)
04114 Oocyte meiosis
104696087 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
ccw03036
]
104696087 (SMC1B)
Chromosome and associated proteins [BR:
ccw03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
104696087 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
104696087 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_29
rve
Motif
Other DBs
NCBI-GeneID:
104696087
NCBI-ProteinID:
XP_010408507
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Position
1A:66045072..66075766
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AA seq
1238 aa
AA seq
DB search
MGYLKLLVVKDFKSWRGQQVIGPFMRFNCIIGPNGSGKSNIMDAVSFVMCEKTSNLRVKS
VRELIHGAHVGKPVSSTASVKIVYCEEDGEEKTFSRVIRGSCSEFLFNDKSVSRSAYVSE
LEKIGILVKARNCLIFQGTVESIAMKKPKERTQLFEQISNSWEYAEEYEQKKKKMQQAEE
DAQFNYNKKKSVAAERKQAKIEKEEAEHYQMLIKELDEERIQVQLFQLYHNEKKIDFLKN
SLDEKNMEAHIKKESLSTAEDSFKVKKKLLGILNRDQQHMEKEMKTLEASLIQQRPLYIK
AKENTSYQIKKVEMSKKSLRDKEKSCDKEKKNIKELEIELNDIEKAWRAFEEKAEEERMQ
RAADIELGESQLERYKELKEMARKKVATLAQQLEKLRWEDKGDQERLKLNRRKKNEIEET
IKQTVEQVEEHEKRIEKLEEYAKICTGSLTEKKQQEEVLAKEIENATARMGEVNEELNKI
VGELQNAKIDYHEGRREQMRAEILESLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKVFSK
YMTAIVVATEKTARDCIRFLKQERAEPETFLALDYLDVKPINEKLREVKGAKVMVDVVQT
QFAPLKKVIQFVSGNALICETVKEAKHIAFDGPVRLKTVALDGTLFLKSGVISGGSSDLR
FKARCWDEKEMSKMKERRDSLINELKDLMKIRRKEADLKQLRAQCQGTQTRLKYSQSELD
VIKKKRLANLFMEKSKLESELVNIEAQYDMLNEGVVQRKEKIQEFQKKINEVEDDVFREF
CEEIGIENIRVYEQEHVRQQEEIDKRRLEFENQRTRLKIQLEYNRDHLQKLTNSVSKLRE
TVHKDEAEIIKLQKDEEKLLKKVNELLEEQQHLKDRLSAHKSELTKSQNEVEEFRKTMLT
LNREATKLQREATALETSLEEKRLKRHNLLLECKVQDLKIKLLFGSLDDISEVELGTEIE
GTQTLSGIYEREERIQIDYSALEVELKELESDKDIEDHVKQMQQEIKCKEVTLMKTAAPN
LRAGEKLQTARDKFQESIDAFETSRKEARICKQEFEEVKKRRYELFSRCFEHASIAIDRI
YKKLCRNTSAQAFLSPENPEEPYLEGIGFNCVAPGKRFMPMDSLSGGEKTVAALALVFAI
HSFRPAPFFILDEIDAALDNTNIDKVSSFIREQAHERFQMIVISLKEEFYCKADALIGVC
PEHDDIMFSQVLTLDLTEYPEGEEQDTAEKPSRSSVFE
NT seq
3717 nt
NT seq
+upstream
nt +downstream
nt
atgggttacctgaagttgctggtggtgaaggacttcaagtcgtggagggggcagcaggtt
atcggcccgttcatgaggttcaactgcatcatcggacccaatggatcaggaaaatctaac
ataatggatgctgttagctttgtgatgtgtgaaaagacatcaaatttgcgagttaaaagc
gttcgagaacttattcatggagcacatgttggaaaacctgtttcttctacagctagtgtg
aagatagtatattgtgaggaagatggggaagaaaaaacattttcaagagttatccgtggt
agttgttctgaatttcttttcaatgacaagtctgtcagccgatctgcatacgtatctgag
cttgaaaaaataggcattcttgtcaaggccaggaattgccttatttttcagggaacagta
gaatcaattgcaatgaagaagccaaaggagagaactcaactttttgaacaaattagtaat
tcatgggaatatgctgaagaatatgaacaaaaaaagaagaaaatgcagcaagcagaagag
gatgcacagtttaattataacaagaaaaaaagcgtggcagcagaacgcaaacaagcaaag
atagaaaaagaggaggcagagcattaccagatgctaatcaaggaactggatgaagaaagg
atacaagtgcagctttttcagctttatcacaatgaaaaaaaaattgactttctgaaaaac
agtttggatgaaaagaatatggaggctcatatcaagaaagagtctctttctacagcagaa
gattcatttaaagtcaagaagaaattacttgggatactaaacagggaccaacagcatatg
gaaaaagaaatgaagactctggaagcatcactgattcagcagagacccctctatataaaa
gcaaaggaaaacacatcctaccaaatcaagaaagtagaaatgtctaaaaaatctctaagg
gacaaggagaaatcctgtgataaggaaaagaagaacataaaagaactagagatagaactg
aatgatattgagaaggcatggagagcatttgaggagaaagctgaagaagagagaatgcag
agagcagcagatattgagctgggagaaagtcagttagagcggtacaaagagctaaaggaa
atggcaagaaagaaagtagctacactagcccagcagctagaaaaacttcgctgggaggat
aaaggagatcaagaaaggctgaaacttaatcggaggaagaagaatgaaattgaggaaacc
ataaaacagactgtggaacaggtggaagagcatgaaaaacgcatagagaagttggaagaa
tatgctaaaatatgcactggatcgttaacagaaaaaaaacagcaggaggaagtgctggct
aaggaaattgagaacgcaacagcaagaatgggtgaagtgaatgaagagttgaacaaaata
gttggtgaactacagaatgccaaaattgattaccatgaaggaaggcgtgagcagatgaga
gcagagatcctggaaagtctcaaaaggctatatccggattctgtgtttggaagattgctt
gacctgtgtcatcctattcataaaaaataccagcttgctgttaccaaggtattcagcaaa
tacatgactgctattgttgttgccactgaaaaaacagcaagagattgcattcggttccta
aaacaggaacgagctgaacctgaaacttttcttgctttggattaccttgatgtcaaacca
attaacgagaagctaagggaggtaaaaggagctaaagtgatggtggatgttgtacaaaca
caatttgcaccattgaaaaaagtcattcagtttgtgagtgggaatgccttgatctgcgaa
acagttaaggaagcaaaacatattgcatttgatggaccagtgaggttgaaaacagtggct
cttgatggaactttatttttgaaatctggagtgatttctggaggatcaagtgatttaaga
tttaaagctagatgttgggatgagaaagaaatgagtaaaatgaaagaaagaagagatagc
ttgattaatgagttaaaggacttaatgaagatcagacggaaggaggctgacttgaagcaa
ttgcgtgctcagtgccaaggaactcagacacgacttaagtattcacagagtgaattagac
gttattaaaaagaaacgtcttgctaatctcttcatggaaaaatcaaaactggaaagtgaa
ctggtaaatattgaggctcagtatgatatgcttaatgaaggagtagtacaaagaaaagag
aaaatacaagaatttcagaaaaaaattaacgaggttgaagatgatgttttccgggaattc
tgtgaagaaattggtatagaaaatattcgtgtgtatgaacaagaacatgtgagacaacaa
gaggagatcgataagagaagactggagtttgaaaatcagaggacacgactgaagattcag
ctggagtataatcgtgatcatctacaaaaattaacaaactcagtcagcaagttgagggag
acagttcataaagatgaagctgagattatcaagctacagaaggatgaggaaaagcttcta
aaaaaagtgaatgaacttttggaggagcagcaacaccttaaggatagattaagtgctcat
aaatctgagcttacaaaaagccaaaatgaagttgaagagttcagaaagacaatgttaact
cttaatagagaagccacaaagttgcagagggaagctacagctctagaaacctctctggaa
gagaagagattaaagcgacacaatctgctgcttgaatgcaaggtgcaggacttgaaaatc
aagttactgtttggatcactggatgacatcagtgaagtagagctaggaactgaaatagaa
ggcacccagactctatcagggatctatgaaagggaagagagaattcagatagactacagt
gccctagaagtcgagctaaaggaactagaatctgataaagatatagaggatcatgttaag
caaatgcagcaggaaatcaaatgtaaagaggtcacgttaatgaagacagctgctccaaac
ctgagagcaggagagaaattacagacagctcgagataagttccaagaatcaatagatgct
tttgagaccagcagaaaggaggccagaatatgcaagcaggaatttgaagaggtgaaaaaa
aggagatatgagctgtttagccggtgctttgagcatgcctccatagccattgacaggatc
tacaagaagctttgcaggaacactagtgctcaggcattccttagtcctgaaaatcctgag
gagccctatctggaaggcattggctttaattgtgtggctccaggcaagcgctttatgcca
atggacagtttgtcaggaggggaaaaaacagtggcagccctggctcttgtgtttgccata
cacagctttcgtccagctcctttttttattttggatgagatagatgctgcactggacaac
acaaacattgataaagtctcgagtttcattagagaacaggcacatgaacggttccaaatg
atagttatttccctgaaggaagagttttattgcaaggcagatgcattgattggagtgtgt
cctgagcacgatgatattatgtttagccaagtcctgaccctggatcttacagagtaccca
gagggggaagagcaggacacagcagagaagccgagccgcagttctgtctttgaatag
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integrated database retrieval system
